Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g05600 Fragaria vesca HOM05D005048 ORTHO05D006420 1.6e-71 272.7 139 100.0
FAN26G2936 Fragaria x ananassa HOM05D005048 ORTHO05D006420 1.2e-44 183.3 151 70.2
FvH4_1g05550 Fragaria vesca HOM05D005048 ORTHO05D006420 2.2e-41 172.6 175 61.7
FAN23G2083 Fragaria x ananassa HOM05D005048 ORTHO05D006420 4.9e-41 171.4 173 61.3
RcHm_v2.0_Chr2g0091251 Rosa chinensis HOM05D005048 ORTHO05D006420 4.9e-41 171.4 175 61.7
MD02G1057100 Malus domestica HOM05D005048 ORTHO05D006420 2.4e-40 169.1 175 61.1
Prupe.7G225700 Prunus persica HOM05D005048 ORTHO05D006420 1.3e-38 163.3 175 60.0
FAN28G0981 Fragaria x ananassa HOM05D005048 ORTHO05D006420 1.9e-37 159.5 188 55.9
Potri.017G118801 Populus trichocarpa HOM05D005048 ORTHO05D006420 1.6e-36 156.4 176 56.2
Sabra17G0098100 Salix brachista HOM05D005048 ORTHO05D006420 6.2e-36 154.5 176 55.1
PGR102G2767 Punica granatum HOM05D005048 ORTHO05D006420 1.1e-35 153.7 175 53.7
GSVIVG01015352001 Vitis vinifera HOM05D005048 ORTHO05D006420 5.2e-35 151.4 173 56.1
Sc08g0007680 Simmondsia chinensis HOM05D005048 ORTHO05D006420 6.8e-35 151.0 173 53.8
Dinv36669 Davidia involucrata HOM05D005048 ORTHO05D006420 1.2e-34 150.2 175 52.6
Cfa003227 Carpinus fangiana HOM05D005048 ORTHO05D006420 3.4e-34 148.7 175 53.1
Ciclev10008139m.g Citrus clementina HOM05D005048 ORTHO05D006420 3.4e-34 148.7 175 54.3
Haze_25781 Corylus avellana HOM05D005048 ORTHO05D006420 3.4e-34 148.7 175 53.1
FAN19G2567 Fragaria x ananassa HOM05D005048 ORTHO05D006420 5.8e-34 147.9 160 59.4
Manes.14G158111 Manihot esculenta HOM05D005048 ORTHO05D006420 5.8e-34 147.9 173 53.8
Nn2g11663 Nelumbo nucifera HOM05D005048 ORTHO05D006420 7.5e-34 147.5 176 52.8
Rhsim03G0239600 Rhododendron simsii HOM05D005048 ORTHO05D006420 7.5e-34 147.5 176 52.3
Migut.D01920 Erythranthe guttata HOM05D005048 ORTHO05D006420 9.8e-34 147.1 173 54.3
Gorai.001G007100 Gossypium raimondii HOM05D005048 ORTHO05D006420 9.8e-34 147.1 173 54.3
TAR383G0565 Trochodendron aralioides HOM05D005048 ORTHO05D006420 1.3e-33 146.7 173 51.4
Gohir.D07G007400 Gossypium hirsutum HOM05D005048 ORTHO05D006420 2.2e-33 146.0 173 53.8
QL10p015858 Quercus lobata HOM05D005048 ORTHO05D006420 2.9e-33 145.6 175 53.7
SalBow2G2764 Salvia bowleyana HOM05D005048 ORTHO05D006420 2.9e-33 145.6 174 54.6
Sed0003567 Sechium edule HOM05D005048 ORTHO05D006420 2.9e-33 145.6 175 51.4
CsaV3_3G010630 Cucumis sativus L. HOM05D005048 ORTHO05D006420 3.7e-33 145.2 175 52.0
ClCG05G003020 Citrullus lanatus HOM05D005048 ORTHO05D006420 4.9e-33 144.8 175 52.0
Dinv41630 Davidia involucrata HOM05D005048 ORTHO05D006420 8.3e-33 144.1 175 52.6
Oeu026966.2 Olea europaea HOM05D005048 ORTHO05D006420 8.3e-33 144.1 176 51.1
Actinidia32670 Actinidia chinensis HOM05D005048 ORTHO05D006420 1.4e-32 143.3 175 52.6
CiPaw.04G161700 Carya illinoinensis HOM05D005048 ORTHO05D006420 1.4e-32 143.3 175 52.6
Hma1.2p1_1151F.1_g261870 Hydrangea macrophylla HOM05D005048 ORTHO05D006420 1.9e-32 142.9 173 52.0
COL.COLO4_37106 Corchorus olitorius HOM05D005048 ORTHO05D006420 3.2e-32 142.1 178 52.8
MELO3C006282.2 Cucumis melo HOM05D005048 ORTHO05D006420 3.2e-32 142.1 173 51.4
TPR.G23489 Trifolium pratense HOM05D005048 ORTHO05D006420 3.2e-32 142.1 176 52.8
Gohir.A07G004800 Gossypium hirsutum HOM05D005048 ORTHO05D006420 4.1e-32 141.7 173 53.2
Ca_17323_v3 Cicer arietinum L. HOM05D005048 ORTHO05D006420 5.4e-32 141.4 173 53.2
Cc01_g04910 Coffea canephora HOM05D005048 ORTHO05D006420 7.1e-32 141.0 173 50.9
Aqoxy1G00313 Aquilegia oxysepala HOM05D005048 ORTHO05D006420 9.2e-32 140.6 173 51.4
Eucgr.C03804 Eucalyptus grandis HOM05D005048 ORTHO05D006420 9.2e-32 140.6 173 53.2
Thecc.09G106000 Theobroma cacao HOM05D005048 ORTHO05D006420 9.2e-32 140.6 173 53.2
Duzib168G1040 Durio zibethinus HOM05D005048 ORTHO05D006420 1.2e-31 140.2 172 53.5
ECA240G4205 Erigeron canadensis HOM05D005048 ORTHO05D006420 1.2e-31 140.2 173 52.0
Lj4g0020985 Lotus japonicus HOM05D005048 ORTHO05D006420 1.2e-31 140.2 173 52.6
Medtr8g103060 Medicago truncatula HOM05D005048 ORTHO05D006420 1.6e-31 139.8 173 53.2
SGA_v2.0_scaffold58G20419 Striga asiatica HOM05D005048 ORTHO05D006420 1.6e-31 139.8 175 52.6
arahy.Tifrunner.gnm1.ann1.T6QICJ Arachis hypogaea HOM05D005048 ORTHO05D006420 2.7e-31 139.0 175 52.6
arahy.Tifrunner.gnm1.ann1.TTP0Q7 Arachis hypogaea HOM05D005048 ORTHO05D006420 2.7e-31 139.0 175 52.6
THA.LOC104799066 Tarenaya hassleriana HOM05D005048 ORTHO05D006420 2.7e-31 139.0 173 50.9
BraSC35t45995Z Brassica rapa HOM05D005048 ORTHO05D006420 3.5e-31 138.7 176 50.6
Aqoxy5G01302 Aquilegia oxysepala HOM05D005048 ORTHO05D006420 4.6e-31 138.3 173 51.4
TWI60G0019 Tripterygium wilfordii HOM05D005048 ORTHO05D006420 4.6e-31 138.3 173 52.0
TWI81G0001 Tripterygium wilfordii HOM05D005048 ORTHO05D006420 4.6e-31 138.3 173 50.3
Peaxi162Scf00231g00512 Petunia axillaris HOM05D005048 ORTHO05D006420 6.0e-31 137.9 175 49.1
vmacro06232 Vaccinium macrocarpon HOM05D005048 ORTHO05D006420 6.0e-31 137.9 175 50.9
DCAR_009632 Daucus carota HOM05D005048 ORTHO05D006420 7.8e-31 137.5 175 50.9
Psat7g014800 Pisum sativum HOM05D005048 ORTHO05D006420 7.8e-31 137.5 173 52.0
A10p08040 Brassica napus HOM05D005048 ORTHO05D006420 1.0e-30 137.1 176 50.0
Glyma.05G229400 Glycine max HOM05D005048 ORTHO05D006420 1.0e-30 137.1 173 52.6
Lalb_Chr05g0223041 Lupinus albus HOM05D005048 ORTHO05D006420 1.0e-30 137.1 170 51.8
BcaB08g35458 Brassica carinata HOM05D005048 ORTHO05D006420 1.3e-30 136.7 176 50.0
Lsat_1_v5_gn_7_41421 Lactuca sativa HOM05D005048 ORTHO05D006420 1.3e-30 136.7 173 50.3
PSO210G2605 Papaver somniferum HOM05D005048 ORTHO05D006420 1.3e-30 136.7 179 48.0
Glyma.14G218300 Glycine max HOM05D005048 ORTHO05D006420 2.3e-30 136.0 173 52.0
C09p39250 Brassica napus HOM05D005048 ORTHO05D006420 3.9e-30 135.2 176 49.4
BolC9t56804H Brassica oleracea HOM05D005048 ORTHO05D006420 3.9e-30 135.2 176 49.4
HPP92_003926 Vanilla planifolia HOM05D005048 ORTHO05D006420 3.9e-30 135.2 176 49.4
VMungo0251G3001 Vigna mungo HOM05D005048 ORTHO05D006420 3.9e-30 135.2 173 52.0
Nitab4.5_0004090g0040 Nicotiana tabacum HOM05D005048 ORTHO05D006420 5.1e-30 134.8 175 50.9
Hund09223 Selenicereus undatus HOM05D005048 ORTHO05D006420 6.6e-30 134.4 173 51.4
EL10Ac8g18435 Beta vulgaris HOM05D005048 ORTHO05D006420 8.6e-30 134.0 173 49.7
CAN.G1379.35 Capsicum annuum HOM05D005048 ORTHO05D006420 1.1e-29 133.7 175 50.9
Phvul.002G311600 Phaseolus vulgaris HOM05D005048 ORTHO05D006420 1.1e-29 133.7 173 52.0
AL7G19480 Arabidopsis lyrata HOM05D005048 ORTHO05D006420 1.5e-29 133.3 175 50.3
AT4G32360 Arabidopsis thaliana HOM05D005048 ORTHO05D006420 1.5e-29 133.3 175 49.1
Nitab4.5_0000399g0090 Nicotiana tabacum HOM05D005048 ORTHO05D006420 1.5e-29 133.3 175 50.3
Carub.0007s0821 Capsella rubella HOM05D005048 ORTHO05D006420 1.9e-29 132.9 176 48.9
Cpa.g.sc23.64 Carica papaya HOM05D005048 ORTHO05D006420 1.9e-29 132.9 175 49.7
HanXRQChr03g0061391 Helianthus annuus HOM05D005048 ORTHO05D006420 1.9e-29 132.9 175 50.3
Thhalv10013379m.g Eutrema salsugineum HOM05D005048 ORTHO05D006420 2.5e-29 132.5 175 49.1
Ah.14g082380 Amaranthus hybridus HOM05D005048 ORTHO05D006420 4.3e-29 131.7 173 49.7
PGSC0003DMG400018273 Solanum tuberosum HOM05D005048 ORTHO05D006420 4.3e-29 131.7 175 50.3
Sp7g30130 Schrenkiella parvula HOM05D005048 ORTHO05D006420 7.3e-29 131.0 176 48.9
Os02g0277600 Oryza sativa ssp. japonica HOM05D005048 ORTHO05D006420 9.5e-29 130.6 173 49.1
Sopen01g044930 Solanum pennellii HOM05D005048 ORTHO05D006420 1.6e-28 129.8 175 49.7
unitig_0.g799 Utricularia gibba HOM05D005048 ORTHO05D006420 1.6e-28 129.8 173 47.4
Solyc01g102490.3 Solanum lycopersicum HOM05D005048 ORTHO05D006420 3.6e-28 128.6 175 49.7
ATR0315G096 Amborella trichopoda HOM05D005048 ORTHO05D006420 1.8e-27 126.3 173 45.7
MBI01_g38807_MAGBIO Magnolia biondii HOM05D005048 ORTHO05D006420 1.8e-27 126.3 164 47.0
SHI02718 Sapria himalayana HOM05D005048 ORTHO05D006420 1.8e-27 126.3 173 49.7
AagrBONN_evm.TU.Sc2ySwM_344.4229 Anthoceros agrestis HOM05D005048 ORTHO05D006420 4.0e-27 125.2 167 49.7
Aa31LG2G18290 Aethionema arabicum HOM05D005048 ORTHO05D006420 1.2e-26 123.6 179 46.4
Pp3c9_14820 Physcomitrium patens HOM05D005048 ORTHO05D006420 2.0e-26 122.9 174 48.3
MBI01_g29840_MAGBIO Magnolia biondii HOM05D005048 ORTHO05D006420 3.4e-26 122.1 167 48.5
Zm00001eb203400 Zea mays HOM05D005048 ORTHO05D006420 1.3e-25 120.2 173 46.2
Zm00001eb203390 Zea mays HOM05D005048 ORTHO05D006420 2.9e-25 119.0 173 45.7
Zm00001eb203380 Zea mays HOM05D005048 ORTHO05D006420 8.4e-25 117.5 173 45.7
Mapoly0125s0046 Marchantia polymorpha HOM05D005048 ORTHO05D006420 3.5e-23 112.1 178 44.4
Lj7C657T3 Lonicera japonica HOM05D005048 ORTHO05D006420 7.8e-23 110.9 153 48.4
BcaC04g20784 Brassica carinata HOM05D005048 ORTHO05D006420 1.0e-22 110.5 157 47.8
SEGI_35536 Sequoiadendron giganteum HOM05D005048 ORTHO05D006420 6.6e-22 107.8 194 40.2
FAN26G3268 Fragaria x ananassa HOM05D005048 ORTHO05D006420 1.5e-21 106.7 105 62.9
SMO361G0652 Selaginella moellendorffii HOM05D005048 ORTHO05D006420 1.5e-21 106.7 172 43.6
Atru.chr7.1383 Acer truncatum HOM05D005048 ORTHO05D006420 9.6e-21 104.0 144 47.9
CBR_g50003 Chara braunii HOM05D005048 ORTHO05D006420 1.2e-18 97.1 176 38.6
PSO210G5559 Papaver somniferum HOM05D005048 ORTHO05D006420 2.6e-18 95.9 152 43.4
MD15G1191600 Malus domestica HOM05D005048 ORTHO05D006420 7.1e-16 87.8 100 54.0
MD15G1191500 Malus domestica HOM05D005048 ORTHO05D006420 9.3e-16 87.4 63 73.0
CARHR240270 Cardamine hirsuta HOM05D005048 ORTHO05D006420 1.0e-14 84.0 94 56.4
MBI01_g28841_MAGBIO Magnolia biondii HOM05D005048 ORTHO05D006420 3.9e-14 82.0 157 39.5
CSS0046369 Camellia sinensis var. sinensis HOM05D005048 ORTHO05D006420 4.3e-13 78.6 69 59.4
AUR62010945 Chenopodium quinoa HOM05D005048 ORTHO05D006420 5.6e-13 78.2 85 57.6
CDE05G2817 Ceratophyllum demersum HOM05D005048 ORTHO05D006420 2.8e-12 75.9 71 59.2
CARHR240280 Cardamine hirsuta HOM05D005048 ORTHO05D006420 1.8e-11 73.2 71 53.5
AUR62021458 Chenopodium quinoa HOM05D005048 ORTHO05D006420 2.4e-11 72.8 69 56.5
Cfa027289 Carpinus fangiana HOM05D005048 ORTHO05D006420 5.3e-11 71.6 153 36.6
Haze_26375 Corylus avellana HOM05D005048 ORTHO05D006420 2.0e-10 69.7 156 36.5
FvH4_1g05561 Fragaria vesca HOM05D005048 ORTHO05D006420 3.4e-10 68.9 108 44.4
Rhsim02G0216900 Rhododendron simsii HOM05D005048 ORTHO05D006420 7.6e-10 67.8 52 71.2
Cre13.g562550 Chlamydomonas reinhardtii HOM05D005048 ORTHO05D006420 1.3e-09 67.0 152 34.9
FvH4_1g05581 Fragaria vesca HOM05D005048 ORTHO05D198222 2.9e-09 65.9 43 79.1
MBI14_g17788_MAGBIO Magnolia biondii HOM05D005048 ORTHO05D006420 3.2e-08 62.4 49 63.3


User provided reference genes

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