Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g04990 Fragaria vesca HOM05D003720 ORTHO05D005312 6.2e-51 203.8 98 100.0
FAN19G0708 Fragaria x ananassa HOM05D003720 ORTHO05D005312 2.6e-28 128.6 67 89.6
FvH4_1g04290 Fragaria vesca HOM05D003720 ORTHO05D005312 2.2e-27 125.6 67 89.6
FAN19G2601 Fragaria x ananassa HOM05D003720 ORTHO05D005312 2.2e-27 125.6 67 89.6
FAN23G2146 Fragaria x ananassa HOM05D003720 ORTHO05D005312 2.2e-27 125.6 67 89.6
FAN26G1450 Fragaria x ananassa HOM05D003720 ORTHO05D005312 2.2e-27 125.6 67 89.6
FAN28G0537 Fragaria x ananassa HOM05D003720 ORTHO05D005312 2.2e-27 125.6 67 89.6
RcHm_v2.0_Chr2g0089861 Rosa chinensis HOM05D003720 ORTHO05D005312 2.2e-27 125.6 67 89.6
Nitab4.5_0000100g0300 Nicotiana tabacum HOM05D003720 ORTHO05D005312 4.1e-26 121.3 67 86.6
MD02G1042600 Malus domestica HOM05D003720 ORTHO05D005312 5.3e-26 120.9 67 86.6
Sed0024242 Sechium edule HOM05D003720 ORTHO05D005312 9.1e-26 120.2 67 83.6
QL02p086231 Quercus lobata HOM05D003720 ORTHO05D005312 1.2e-25 119.8 67 85.1
MELO3C025310.2 Cucumis melo HOM05D003720 ORTHO05D005312 1.5e-25 119.4 64 85.9
Manes.03G068200 Manihot esculenta HOM05D003720 ORTHO05D005312 1.5e-25 119.4 67 83.6
Cc06_g09260 Coffea canephora HOM05D003720 ORTHO05D005312 2.0e-25 119.0 67 85.1
CAN.G368.4 Capsicum annuum HOM05D003720 ORTHO05D005312 2.6e-25 118.6 67 83.6
Lalb_Chr13g0302281 Lupinus albus HOM05D003720 ORTHO05D005312 2.6e-25 118.6 67 83.6
Prupe.7G234400 Prunus persica HOM05D003720 ORTHO05D005312 2.6e-25 118.6 67 85.1
Sopen08g011820 Solanum pennellii HOM05D003720 ORTHO05D005312 2.6e-25 118.6 67 85.1
PGSC0003DMG400013949 Solanum tuberosum HOM05D003720 ORTHO05D005312 2.6e-25 118.6 67 85.1
CsaV3_1G030910 Cucumis sativus L. HOM05D003720 ORTHO05D005312 3.5e-25 118.2 67 82.1
Hund12707 Selenicereus undatus HOM05D003720 ORTHO05D005312 3.5e-25 118.2 67 83.6
TWI63G0927 Tripterygium wilfordii HOM05D003720 ORTHO05D005312 3.5e-25 118.2 67 83.6
Atru.chr7.1286 Acer truncatum HOM05D003720 ORTHO05D005312 4.5e-25 117.9 67 80.6
EL10Ac8g19346 Beta vulgaris HOM05D003720 ORTHO05D005312 4.5e-25 117.9 67 80.6
Cpa.g.sc23.154 Carica papaya HOM05D003720 ORTHO05D005312 4.5e-25 117.9 67 82.1
ClCG06G010450 Citrullus lanatus HOM05D003720 ORTHO05D005312 4.5e-25 117.9 67 82.1
MD15G1181200 Malus domestica HOM05D003720 ORTHO05D005312 4.5e-25 117.9 67 85.1
Thecc.09G115700 Theobroma cacao HOM05D003720 ORTHO05D005312 4.5e-25 117.9 67 82.1
arahy.Tifrunner.gnm1.ann1.F3YJTF Arachis hypogaea HOM05D003720 ORTHO05D005312 5.9e-25 117.5 67 82.1
arahy.Tifrunner.gnm1.ann1.S8F21X Arachis hypogaea HOM05D003720 ORTHO05D005312 5.9e-25 117.5 67 82.1
Glyma.05G012400 Glycine max HOM05D003720 ORTHO05D005312 5.9e-25 117.5 67 83.6
Oeu002223.1 Olea europaea HOM05D003720 ORTHO05D005312 7.7e-25 117.1 67 83.6
Glyma.17G120500 Glycine max HOM05D003720 ORTHO05D005312 1.0e-24 116.7 67 82.1
Lalb_Chr12g0197621 Lupinus albus HOM05D003720 ORTHO05D005312 1.0e-24 116.7 67 80.6
Nitab4.5_0002116g0040 Nicotiana tabacum HOM05D003720 ORTHO05D005312 1.0e-24 116.7 67 83.6
Phvul.003G176300 Phaseolus vulgaris HOM05D003720 ORTHO05D005312 1.0e-24 116.7 67 82.1
VMungo1215G1596 Vigna mungo HOM05D003720 ORTHO05D005312 1.0e-24 116.7 67 82.1
PGR102G1985 Punica granatum HOM05D003720 ORTHO05D005312 1.3e-24 116.3 67 80.6
Aqoxy7G01852 Aquilegia oxysepala HOM05D003720 ORTHO05D005312 1.7e-24 115.9 67 82.1
AUR62027382 Chenopodium quinoa HOM05D003720 ORTHO05D005312 1.7e-24 115.9 67 80.6
Nn8g39280 Nelumbo nucifera HOM05D003720 ORTHO05D005312 1.7e-24 115.9 67 82.1
Ciclev10007224m.g Citrus clementina HOM05D003720 ORTHO05D005312 2.2e-24 115.5 67 80.6
Dinv36598 Davidia involucrata HOM05D003720 ORTHO05D005312 2.2e-24 115.5 67 82.1
Migut.J01184 Erythranthe guttata HOM05D003720 ORTHO05D005312 2.2e-24 115.5 67 80.6
Medtr4g112045 Medicago truncatula HOM05D003720 ORTHO05D005312 2.2e-24 115.5 72 80.6
Sc08g0004790 Simmondsia chinensis HOM05D003720 ORTHO05D005312 2.2e-24 115.5 67 83.6
Ca_02544_v3 Cicer arietinum L. HOM05D003720 ORTHO05D005312 2.9e-24 115.2 67 82.1
Lj4g0009521 Lotus japonicus HOM05D003720 ORTHO05D005312 2.9e-24 115.2 67 79.1
Psat4g042800 Pisum sativum HOM05D003720 ORTHO05D005312 2.9e-24 115.2 67 82.1
TPR.G26776 Trifolium pratense HOM05D003720 ORTHO05D005312 2.9e-24 115.2 67 82.1
CiPaw.03G235900 Carya illinoinensis HOM05D003720 ORTHO05D005312 3.8e-24 114.8 67 79.1
Gohir.A05G021000 Gossypium hirsutum HOM05D003720 ORTHO05D005312 3.8e-24 114.8 67 80.6
Gorai.009G022700 Gossypium raimondii HOM05D003720 ORTHO05D005312 3.8e-24 114.8 67 80.6
Lsat_1_v5_gn_5_99761 Lactuca sativa HOM05D003720 ORTHO05D005312 3.8e-24 114.8 67 79.1
CANSAT56G4488 Cannabis sativa HOM05D003720 ORTHO05D005312 5.0e-24 114.4 67 80.6
AUR62031297 Chenopodium quinoa HOM05D003720 ORTHO05D005312 5.0e-24 114.4 67 79.1
Duzib168G1140 Durio zibethinus HOM05D003720 ORTHO05D005312 5.0e-24 114.4 67 80.6
SalBow6G2056 Salvia bowleyana HOM05D003720 ORTHO05D005312 5.0e-24 114.4 67 79.1
THA.LOC104809021 Tarenaya hassleriana HOM05D003720 ORTHO05D005312 5.0e-24 114.4 67 77.6
Eucgr.C04138 Eucalyptus grandis HOM05D003720 ORTHO05D005312 6.5e-24 114.0 67 74.6
Gohir.D06G058501 Gossypium hirsutum HOM05D003720 ORTHO05D005312 6.5e-24 114.0 67 79.1
Gorai.010G068600 Gossypium raimondii HOM05D003720 ORTHO05D005312 6.5e-24 114.0 67 79.1
SGA_v2.0_scaffold45G17079 Striga asiatica HOM05D003720 ORTHO05D005312 6.5e-24 114.0 67 80.6
TAR383G0813 Trochodendron aralioides HOM05D003720 ORTHO05D005312 6.5e-24 114.0 67 80.6
MSTRG.6069 Avicennia marina HOM05D003720 ORTHO05D005312 8.5e-24 113.6 67 80.6
HanXRQChr10g0317421 Helianthus annuus HOM05D003720 ORTHO05D005312 8.5e-24 113.6 67 77.6
GSVIVG01015441001 Vitis vinifera HOM05D003720 ORTHO05D005312 8.5e-24 113.6 67 80.6
ECA234G2971 Erigeron canadensis HOM05D003720 ORTHO05D005312 1.1e-23 113.2 67 77.6
Haze_25676 Corylus avellana HOM05D003720 ORTHO05D005312 1.5e-23 112.8 67 77.6
Cfa003295 Carpinus fangiana HOM05D003720 ORTHO05D005312 1.9e-23 112.5 67 79.1
Actinidia07451 Actinidia chinensis HOM05D003720 ORTHO05D005312 2.5e-23 112.1 67 74.6
vmacro06189 Vaccinium macrocarpon HOM05D003720 ORTHO05D005312 2.5e-23 112.1 67 77.6
Gohir.A06G060200 Gossypium hirsutum HOM05D003720 ORTHO05D005312 3.2e-23 111.7 67 77.6
Potri.018G072600 Populus trichocarpa HOM05D003720 ORTHO05D005312 3.2e-23 111.7 67 79.1
SEGI_35777 Sequoiadendron giganteum HOM05D003720 ORTHO05D005312 3.2e-23 111.7 67 79.1
CDE06G0602 Ceratophyllum demersum HOM05D003720 ORTHO05D005312 4.2e-23 111.3 67 73.1
Rhsim03G0245400 Rhododendron simsii HOM05D003720 ORTHO05D005312 4.2e-23 111.3 67 77.6
SHI03186 Sapria himalayana HOM05D003720 ORTHO05D005312 4.2e-23 111.3 67 73.1
DCAR_028737 Daucus carota HOM05D003720 ORTHO05D005312 5.5e-23 110.9 66 75.8
Dinv41570 Davidia involucrata HOM05D003720 ORTHO05D005312 7.2e-23 110.5 67 77.6
Manes.16G064500 Manihot esculenta HOM05D003720 ORTHO05D005312 9.4e-23 110.2 63 77.8
CDE07G1715 Ceratophyllum demersum HOM05D003720 ORTHO05D005312 1.6e-22 109.4 63 76.2
PSO357G0216 Papaver somniferum HOM05D003720 ORTHO05D005312 1.6e-22 109.4 63 81.0
PSO170G5328 Papaver somniferum HOM05D003720 ORTHO05D005312 4.7e-22 107.8 63 79.4
Sabra18G0064000 Salix brachista HOM05D003720 ORTHO05D005312 4.7e-22 107.8 67 76.1
ATR0561G176 Amborella trichopoda HOM05D003720 ORTHO05D005312 1.0e-21 106.7 67 74.6
CSS0011692 Camellia sinensis var. sinensis HOM05D003720 ORTHO05D005312 1.0e-21 106.7 67 77.6
CSS0041174 Camellia sinensis var. sinensis HOM05D003720 ORTHO05D005312 1.0e-21 106.7 67 77.6
Thhalv10001876m.g Eutrema salsugineum HOM05D003720 ORTHO05D005312 1.4e-21 106.3 67 73.1
COL.COLO4_34940 Corchorus olitorius HOM05D003720 ORTHO05D005312 4.0e-21 104.8 85 63.5
Zm00001eb390320 Zea mays HOM05D003720 ORTHO05D005312 4.0e-21 104.8 67 73.1
AL4G20110 Arabidopsis lyrata HOM05D003720 ORTHO05D005312 8.8e-21 103.6 67 71.6
Aa31LG5G8890 Aethionema arabicum HOM05D003720 ORTHO05D005312 1.1e-20 103.2 67 70.1
unitig_22.g6632 Utricularia gibba HOM05D003720 ORTHO05D005312 1.1e-20 103.2 67 74.6
Carub.0004s0739 Capsella rubella HOM05D003720 ORTHO05D005312 1.5e-20 102.8 67 68.7
A07p17900 Brassica napus HOM05D003720 ORTHO05D005312 4.4e-20 101.3 67 68.7
AT2G26890 Arabidopsis thaliana HOM05D003720 ORTHO05D005312 5.7e-20 100.9 67 70.1
BcaC02g10846 Brassica carinata HOM05D003720 ORTHO05D005312 5.7e-20 100.9 67 68.7
C04p24570 Brassica napus HOM05D003720 ORTHO05D005312 5.7e-20 100.9 67 68.7
AagrBONN_evm.TU.Sc2ySwM_368.1081 Anthoceros agrestis HOM05D003720 ORTHO05D005312 7.4e-20 100.5 67 68.7
Pp3c13_3460 Physcomitrium patens HOM05D003720 ORTHO05D005312 1.4e-18 96.3 67 65.7
SMO358G0126 Selaginella moellendorffii HOM05D003720 ORTHO05D005312 1.4e-18 96.3 67 65.7
Mapoly0043s0138 Marchantia polymorpha HOM05D003720 ORTHO05D005312 1.8e-18 95.9 67 67.2
Pp3c4_24650 Physcomitrium patens HOM05D003720 ORTHO05D005312 2.6e-17 92.0 74 60.8
arahy.Tifrunner.gnm1.ann1.C2X0J0 Arachis hypogaea HOM05D057988 ORTHO05D005312 1.7e-16 89.4 56 71.4
CBR_g4479 Chara braunii HOM05D003720 ORTHO05D005312 1.1e-15 86.7 56 71.4
BraA07t29508Z Brassica rapa HOM05D003720 ORTHO05D005312 3.2e-15 85.1 80 55.0
BolC4t23961H Brassica oleracea HOM05D003720 ORTHO05D005312 1.6e-14 82.8 80 52.5
Peaxi162Scf00256g00817 Petunia axillaris HOM05D003720 ORTHO05D005312 2.4e-10 68.9 38 84.2
Lj7C641G5 Lonicera japonica HOM05D003720 ORTHO05D005312 4.1e-10 68.2 39 76.9
TAR626G1854 Trochodendron aralioides HOM05D003720 ORTHO05D005312 4.1e-10 68.2 38 81.6
arahy.Tifrunner.gnm1.ann1.D8BJR2 Arachis hypogaea HOM05D003720 ORTHO05D005312 1.6e-09 66.2 67 53.7
HPP92_014851 Vanilla planifolia HOM05D003720 ORTHO05D005312 1.6e-09 66.2 45 64.4
vmacro05353 Vaccinium macrocarpon HOM05D004975 ORTHO05D005963 5.9e-09 64.3 65 52.3
CARHR119040 Cardamine hirsuta HOM05D003720 ORTHO05D005312 7.7e-09 63.9 39 69.2
vmacro00971 Vaccinium macrocarpon HOM05D003720 ORTHO05D426581 1.0e-08 63.5 39 69.2
arahy.Tifrunner.gnm1.ann1.T5A0DZ Arachis hypogaea HOM05D003720 ORTHO05D005312 4.2e-07 58.2 38 68.4
Peaxi162Scf00256g00815 Petunia axillaris HOM05D003720 ORTHO05D005312 9.4e-07 57.0 29 89.7
FAN23G1875 Fragaria x ananassa HOM05D003720 ORTHO05D207684 3.6e-06 55.1 29 86.2


User provided reference genes

Program Settings