Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 2.3e-240 835.1 409 100.0
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 9.7e-231 803.1 383 99.5
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.1e-229 798.1 382 98.7
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 2.2e-227 792.0 383 97.9
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.5e-226 788.5 383 97.7
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.1e-221 771.2 383 95.8
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.1e-213 745.0 376 94.1
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-156 556.2 381 71.4
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.6e-156 555.1 383 70.5
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 3.0e-155 552.4 384 68.2
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.1e-153 544.3 384 71.1
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-152 543.5 381 72.2
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-152 542.7 384 71.9
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 4.2e-149 531.9 384 67.2
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 6.2e-145 518.1 389 66.3
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-142 510.4 364 70.6
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-142 510.4 364 70.6
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 3.6e-132 475.7 342 68.1
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.9e-132 474.6 337 69.1
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 3.3e-130 469.2 342 69.9
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-129 466.1 342 69.3
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.1e-128 462.2 342 68.7
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 2.0e-119 433.3 386 57.5
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 3.5e-119 432.6 386 56.5
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-118 431.0 386 57.3
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-115 420.2 388 55.7
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 2.3e-115 419.9 385 55.8
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 3.1e-112 409.5 381 53.8
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 2.5e-109 399.8 375 53.6
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-103 380.2 366 54.1
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.7e-103 379.8 387 51.9
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 3.6e-100 369.4 388 49.2
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.5e-98 361.7 386 49.2
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-95 354.0 379 48.0
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-94 351.3 364 51.9
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.7e-89 332.8 381 47.5
FAN28G0011 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-80 303.5 386 44.8
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 4.3e-77 292.7 402 43.8
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-76 291.2 355 45.4
FvH4_5g09163 Fragaria vesca HOM05D006732 ORTHO05D005682 6.4e-73 278.9 219 60.3
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 4.6e-71 272.7 253 54.5
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 5.2e-67 259.2 376 41.8
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-66 257.7 413 39.5
FAN23G0993 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-63 247.7 165 71.5
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 1.9e-61 240.7 416 37.3
FAN26G2548 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.3e-61 239.6 342 40.6
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-54 217.2 389 40.1
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-54 217.2 389 40.1
FvH4_7g04610 Fragaria vesca HOM05D006732 ORTHO05D005682 2.5e-53 213.8 387 39.5
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.6e-53 211.8 383 41.0
FAN01G2330 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.6e-52 209.9 386 39.6
FAN26G2691 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.1e-52 208.8 172 54.1
FvH4_1g04850 Fragaria vesca HOM05D006732 ORTHO05D005682 2.4e-51 207.2 190 51.1
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 2.6e-50 203.8 419 35.8
FAN26G0550 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.9e-49 200.3 164 54.3
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.6e-46 189.1 345 37.1
RcHm_v2.0_Chr2g0090141 Rosa chinensis HOM05D006732 ORTHO05D005682 1.5e-45 188.0 165 55.8
FAN28G2932 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.6e-45 186.0 209 50.7
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.6e-42 177.2 382 35.3
FAN26G3406 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.8e-42 176.0 204 47.5
FAN26G1044 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.4e-41 172.2 359 35.7
FAN10G1871 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-40 171.4 285 42.5
FvH4_1g03730 Fragaria vesca HOM05D006732 ORTHO05D005682 3.9e-38 163.3 265 36.2
RcHm_v2.0_Chr2g0089871 Rosa chinensis HOM05D006732 ORTHO05D005682 6.7e-38 162.5 140 55.0
FAN19G1213 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.7e-38 162.2 383 32.4
MD02G1004600 Malus domestica HOM05D006732 ORTHO05D005682 8.7e-38 162.2 368 36.7
FvH4_6g38540 Fragaria vesca HOM05D006732 ORTHO05D005682 7.4e-37 159.1 403 30.8
FAN19G1133 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.8e-36 156.4 391 31.5
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.3e-35 152.9 342 33.0
FvH4_1g07301 Fragaria vesca HOM05D006732 ORTHO05D005682 7.9e-31 139.0 104 57.7
FvH4_3g44180 Fragaria vesca HOM05D031336 ORTHO05D029596 8.2e-28 129.0 414 26.6
FAN11G3653 Fragaria x ananassa HOM05D031336 ORTHO05D029596 8.2e-28 129.0 414 26.6
FAN28G1694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-27 127.5 170 41.8
FAN08G2174 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-26 124.8 108 58.3
FvH4_6g52510 Fragaria vesca HOM05D013417 ORTHO05D022618 2.0e-26 124.4 323 32.8
FAN19G1906 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.8e-26 122.9 147 42.9
FAN28G1562 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-25 121.3 78 71.8
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-24 118.2 180 45.6
Prupe.7G110000 Prunus persica HOM05D006732 ORTHO05D005682 1.4e-24 118.2 333 30.6
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 4.2e-24 116.7 269 34.9
RcHm_v2.0_Chr1g0380941 Rosa chinensis HOM05D006732 ORTHO05D005682 5.5e-24 116.3 420 26.9
FvH4_7g31682 Fragaria vesca HOM05D010677 ORTHO05D012678 3.0e-22 110.5 289 30.1
FAN03G1932 Fragaria x ananassa HOM05D018501 ORTHO05D020617 5.1e-22 109.8 379 26.9
RcHm_v2.0_Chr5g0043771 Rosa chinensis HOM05D018501 ORTHO05D020617 6.7e-22 109.4 378 27.2
RcHm_v2.0_Chr1g0329851 Rosa chinensis HOM05D006732 ORTHO05D005682 8.7e-22 109.0 201 40.8
FvH4_7g30461 Fragaria vesca HOM05D008398 ORTHO05D035411 1.1e-21 108.6 330 28.8
FAN14G4282 Fragaria x ananassa HOM05D013417 ORTHO05D022618 7.4e-21 105.9 324 29.3
RcHm_v2.0_Chr1g0337091 Rosa chinensis HOM05D010677 ORTHO05D012678 9.7e-21 105.5 212 34.9
RcHm_v2.0_Chr1g0379901 Rosa chinensis HOM05D008398 ORTHO05D005682 1.6e-20 104.8 423 29.8
FvH4_7g31670 Fragaria vesca HOM05D010677 ORTHO05D012678 2.2e-20 104.4 289 29.1
FvH4_2g38420 Fragaria vesca HOM05D013417 ORTHO05D022618 2.8e-20 104.0 326 31.0
FvH4_7g30481 Fragaria vesca HOM05D008398 ORTHO05D029520 3.7e-20 103.6 311 31.2
FAN03G3389 Fragaria x ananassa HOM05D010677 ORTHO05D012678 3.7e-20 103.6 293 28.3
FAN23G2570 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.7e-20 103.6 93 48.4
FAN23G1684 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.3e-20 102.8 178 33.1
FvH4_4g12220 Fragaria vesca HOM05D013417 ORTHO05D022618 8.2e-20 102.4 317 30.6
FvH4_5g34640 Fragaria vesca HOM05D008398 ORTHO05D005682 2.4e-19 100.9 362 30.4
FAN01G2543 Fragaria x ananassa HOM05D008398 ORTHO05D046348 2.4e-19 100.9 323 30.3
FAN06G3627 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.4e-19 100.9 238 32.8
FAN12G2017 Fragaria x ananassa HOM05D013417 ORTHO05D022618 2.4e-19 100.9 308 30.5
RcHm_v2.0_Chr1g0337131 Rosa chinensis HOM05D006732 ORTHO05D012678 2.4e-19 100.9 205 33.7
FAN06G0523 Fragaria x ananassa HOM05D008398 ORTHO05D005682 3.1e-19 100.5 324 29.0
RcHm_v2.0_Chr1g0379941 Rosa chinensis HOM05D008398 ORTHO05D005682 3.1e-19 100.5 421 29.0
FAN06G1563 Fragaria x ananassa HOM05D018501 ORTHO05D020617 4.1e-19 100.1 230 33.9
FAN18G2036 Fragaria x ananassa HOM05D013417 ORTHO05D005682 4.1e-19 100.1 285 31.6
Prupe.2G176100 Prunus persica HOM05D006732 ORTHO05D005682 4.1e-19 100.1 215 34.4
FAN03G2148 Fragaria x ananassa HOM05D018501 ORTHO05D020617 5.3e-19 99.8 414 27.1
FAN26G3385 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.9e-19 99.4 138 39.9
FAN15G3012 Fragaria x ananassa HOM05D010677 ORTHO05D012678 9.0e-19 99.0 291 31.3
FAN19G3146 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.0e-19 99.0 195 36.4
FvH4_7g30470 Fragaria vesca HOM05D008398 ORTHO05D046348 1.2e-18 98.6 329 29.5
FAN06G4869 Fragaria x ananassa HOM05D018501 ORTHO05D020617 1.5e-18 98.2 230 33.5
FvH4_1g03530 Fragaria vesca HOM05D006732 ORTHO05D005682 3.4e-18 97.1 192 37.0
FAN10G0863 Fragaria x ananassa HOM05D008398 ORTHO05D005682 3.4e-18 97.1 266 32.3
FvH4_7g31260 Fragaria vesca HOM05D010677 ORTHO05D012678 4.5e-18 96.7 287 28.9
FAN06G1115 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.0e-17 95.5 287 28.2
FAN06G1601 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.0e-17 95.5 287 28.2
FAN23G1145 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-17 95.1 65 66.2
FvH4_7g16534 Fragaria vesca HOM05D008398 ORTHO05D046322 1.7e-17 94.7 332 31.3
FAN19G2055 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-17 94.7 81 56.8
FvH4_7g04500 Fragaria vesca HOM05D018501 ORTHO05D020617 2.2e-17 94.4 233 32.2
FAN23G1506 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-17 94.4 71 54.9
FAN05G0770 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.9e-17 94.0 327 29.4
FAN18G3618 Fragaria x ananassa HOM05D008398 ORTHO05D005682 3.8e-17 93.6 303 29.4
FAN23G1741 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.8e-17 93.6 118 44.1
FAN12G2010 Fragaria x ananassa HOM05D013417 ORTHO05D022618 6.5e-17 92.8 307 29.6
FAN28G2349 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.5e-17 92.4 120 40.0
FAN28G2648 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.5e-17 92.4 120 40.0
Prupe.6G029800 Prunus persica HOM05D006732 ORTHO05D005682 8.5e-17 92.4 175 35.4
RcHm_v2.0_Chr5g0043731 Rosa chinensis HOM05D018501 ORTHO05D020617 8.5e-17 92.4 290 29.3
FAN06G5012 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.9e-16 91.3 404 25.5
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 4.2e-16 90.1 422 25.4
FvH4_7g31320 Fragaria vesca HOM05D010677 ORTHO05D012678 5.5e-16 89.7 293 27.0
FAN10G1111 Fragaria x ananassa HOM05D000122 ORTHO05D000139 5.5e-16 89.7 265 28.3
FAN06G3455 Fragaria x ananassa HOM05D010677 ORTHO05D012678 9.4e-16 89.0 406 26.1
FvH4_7g27001 Fragaria vesca HOM05D010677 ORTHO05D012678 1.2e-15 88.6 419 25.3
FAN06G2795 Fragaria x ananassa HOM05D008398 ORTHO05D046322 1.6e-15 88.2 286 30.8
FAN10G3231 Fragaria x ananassa HOM05D000122 ORTHO05D000139 4.6e-15 86.7 256 28.5
FvH4_1g04991 Fragaria vesca HOM05D006732 ORTHO05D005682 3.0e-14 84.0 150 42.7
FAN03G0822 Fragaria x ananassa HOM05D010677 ORTHO05D012678 8.8e-14 82.4 167 31.7
FAN09G2688 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.1e-13 82.0 278 30.6
FAN10G3802 Fragaria x ananassa HOM05D008398 ORTHO05D035411 1.1e-13 82.0 198 31.3
FAN04G2845 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.5e-13 81.6 207 29.5
FvH4_5g09162 Fragaria vesca HOM05D006732 ORTHO05D005682 5.7e-13 79.7 98 46.9
FAN12G0204 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.7e-13 79.7 103 39.8
QL02p081954 Quercus lobata HOM05D006732 ORTHO05D005682 7.4e-13 79.3 360 25.6
FAN19G1354 Fragaria x ananassa HOM05D006732 ORTHO05D035266 9.7e-13 79.0 194 36.1
FAN19G0291 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-12 78.2 163 34.4
FAN03G1797 Fragaria x ananassa HOM05D008398 ORTHO05D029520 2.8e-12 77.4 256 29.3
FAN03G3131 Fragaria x ananassa HOM05D008398 ORTHO05D029520 2.8e-12 77.4 256 29.3
Dinv24221 Davidia involucrata HOM05D015193 ORTHO05D005682 6.3e-12 76.3 221 29.4
FvH4_1g04520 Fragaria vesca HOM05D006732 ORTHO05D005682 6.3e-12 76.3 82 45.1
FAN03G2566 Fragaria x ananassa HOM05D008398 ORTHO05D005682 6.3e-12 76.3 180 33.3
FAN01G1167 Fragaria x ananassa HOM05D000122 ORTHO05D000139 5.3e-11 73.2 290 24.5
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 9.1e-11 72.4 263 27.0
RcHm_v2.0_Chr5g0014821 Rosa chinensis HOM05D006732 ORTHO05D005682 2.6e-10 70.9 326 26.1
FvH4_4g00460 Fragaria vesca HOM05D031586 ORTHO05D045486 5.0e-09 66.6 259 30.1
FAN23G1373 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.0e-09 66.6 50 58.0
FvH4_4g06202 Fragaria vesca HOM05D006732 ORTHO05D005682 6.5e-09 66.2 55 49.1
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 8.5e-09 65.9 167 31.1
FvH4_4g06201 Fragaria vesca HOM05D006732 ORTHO05D005682 1.1e-08 65.5 106 44.3
FAN03G1279 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.5e-08 64.3 172 31.4
FvH4_1g04910 Fragaria vesca HOM05D006732 ORTHO05D046085 3.2e-08 63.9 54 51.9
COL.COLO4_29430 Corchorus olitorius HOM05D035412 ORTHO05D019051 4.2e-08 63.5 240 25.0
Lj5C264T6 Lonicera japonica HOM05D012292 ORTHO05D012234 7.2e-08 62.8 346 25.4
FvH4_7g31310 Fragaria vesca HOM05D000122 ORTHO05D012678 9.4e-08 62.4 287 25.4
FAN19G2861 Fragaria x ananassa HOM05D006732 ORTHO05D046085 9.4e-08 62.4 51 54.9
FAN22G0443 Fragaria x ananassa HOM05D013417 ORTHO05D005682 9.4e-08 62.4 223 26.9
Prupe.6G083000 Prunus persica HOM05D006765 ORTHO05D005682 1.2e-07 62.0 216 28.7
QL02p078454 Quercus lobata HOM05D006732 ORTHO05D005682 1.2e-07 62.0 133 33.1
FvH4_7g28941 Fragaria vesca HOM05D006732 ORTHO05D005682 2.1e-07 61.2 136 34.6
Dinv24224 Davidia involucrata HOM05D015193 ORTHO05D005682 6.1e-07 59.7 208 28.4
Rhsim02G0133500 Rhododendron simsii HOM05D019272 ORTHO05D020252 7.9e-07 59.3 151 31.1


User provided reference genes

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