Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 1.5e-234 815.8 418 100.0
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-217 758.4 414 95.7
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-188 662.9 375 85.6
FAN26G2548 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.4e-152 541.6 320 81.9
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 2.2e-137 493.0 392 63.5
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 2.1e-108 396.7 386 52.3
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 3.7e-108 396.0 387 50.9
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 7.1e-104 381.7 391 49.6
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.1e-104 381.7 392 49.2
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-103 380.6 391 49.6
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.9e-103 378.3 390 49.2
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-102 376.7 388 51.0
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 3.9e-102 375.9 377 53.1
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-101 374.4 392 49.5
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-101 374.0 386 51.0
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 4.3e-101 372.5 388 49.2
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 7.4e-101 371.7 392 49.0
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 2.2e-100 370.2 389 51.2
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.7e-100 369.4 389 50.9
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.3e-99 365.5 391 51.2
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.4e-98 362.8 387 49.9
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 5.9e-98 362.1 381 50.9
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-96 356.3 385 50.4
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 1.6e-95 354.0 398 47.2
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 3.0e-94 349.7 375 50.4
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.9e-94 349.4 382 49.5
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-93 347.8 382 46.6
FAN28G2932 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.4e-90 336.3 204 83.8
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.5e-89 332.0 363 48.8
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.5e-89 332.0 363 48.8
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.9e-86 322.8 366 47.0
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.7e-84 316.2 381 43.6
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.7e-84 316.2 355 45.4
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.5e-80 303.5 333 47.4
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 3.6e-79 299.7 343 47.8
FAN28G0011 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-76 290.4 381 41.5
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.1e-75 286.6 341 49.0
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 4.1e-75 286.2 341 48.7
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-73 280.4 340 47.9
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 8.5e-73 278.5 401 42.6
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-69 268.1 348 41.1
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 5.5e-64 249.2 380 41.1
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.4e-64 248.4 410 39.0
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 2.2e-60 237.3 406 37.4
FvH4_5g09163 Fragaria vesca HOM05D006732 ORTHO05D005682 1.1e-59 235.0 220 51.8
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-58 231.1 381 40.4
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-58 231.1 381 40.4
FvH4_7g04610 Fragaria vesca HOM05D006732 ORTHO05D005682 4.5e-58 229.6 381 39.9
FAN01G2330 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-54 217.6 379 39.6
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-54 217.2 369 39.8
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 4.0e-54 216.5 247 47.0
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 2.7e-50 203.8 417 35.7
FAN19G0291 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.3e-48 196.8 193 57.0
FvH4_1g04850 Fragaria vesca HOM05D006732 ORTHO05D005682 2.6e-45 187.2 189 47.6
FAN26G2691 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-42 177.6 171 49.1
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-41 174.5 346 36.1
RcHm_v2.0_Chr2g0090141 Rosa chinensis HOM05D006732 ORTHO05D005682 3.9e-41 173.3 164 49.4
FAN26G1044 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.6e-41 172.6 343 34.7
FAN19G1213 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-40 171.8 385 31.4
FAN10G1871 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.5e-40 168.7 288 39.9
FAN26G0550 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-38 165.2 163 48.5
FvH4_1g03730 Fragaria vesca HOM05D006732 ORTHO05D005682 3.1e-38 163.7 263 36.5
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.0e-38 163.3 383 34.5
FvH4_6g38540 Fragaria vesca HOM05D006732 ORTHO05D005682 5.2e-38 162.9 398 31.9
FvH4_3g44180 Fragaria vesca HOM05D031336 ORTHO05D029596 8.9e-38 162.2 406 30.5
FAN11G3653 Fragaria x ananassa HOM05D031336 ORTHO05D029596 8.9e-38 162.2 406 30.5
FAN23G0993 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.7e-36 156.8 165 47.3
FAN19G1133 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-35 153.7 390 31.3
FAN19G0514 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-34 151.4 254 42.1
FAN26G3406 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-34 151.0 205 39.0
RcHm_v2.0_Chr2g0089871 Rosa chinensis HOM05D006732 ORTHO05D005682 7.8e-34 149.1 140 50.0
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.6e-31 140.2 326 33.1
FvH4_1g07301 Fragaria vesca HOM05D006732 ORTHO05D005682 1.1e-27 128.6 97 53.6
FAN28G1694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.4e-27 126.3 175 40.0
RcHm_v2.0_Chr5g0043771 Rosa chinensis HOM05D018501 ORTHO05D020617 5.4e-27 126.3 369 31.2
FAN23G1684 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.6e-25 119.4 179 36.3
FvH4_7g04500 Fragaria vesca HOM05D018501 ORTHO05D020617 1.9e-24 117.9 407 27.5
FAN08G2174 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.3e-24 117.1 117 46.2
FAN06G4869 Fragaria x ananassa HOM05D018501 ORTHO05D020617 7.3e-24 115.9 407 27.8
FAN06G1563 Fragaria x ananassa HOM05D018501 ORTHO05D020617 3.6e-23 113.6 405 26.9
FAN03G1932 Fragaria x ananassa HOM05D018501 ORTHO05D020617 4.7e-23 113.2 393 27.0
FAN03G2148 Fragaria x ananassa HOM05D018501 ORTHO05D020617 4.7e-23 113.2 399 27.6
FAN19G2109 Fragaria x ananassa HOM05D009798 ORTHO05D001056 8.1e-23 112.5 61 86.9
RcHm_v2.0_Chr1g0380941 Rosa chinensis HOM05D006732 ORTHO05D005682 1.8e-22 111.3 423 27.9
FAN23G1741 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-22 110.9 193 34.7
FvH4_6g52510 Fragaria vesca HOM05D013417 ORTHO05D022618 4.0e-22 110.2 352 28.1
FAN19G1906 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.0e-22 110.2 149 38.9
MD02G1004600 Malus domestica HOM05D006732 ORTHO05D005682 5.2e-22 109.8 367 30.5
FAN05G0770 Fragaria x ananassa HOM05D008398 ORTHO05D005682 8.9e-22 109.0 317 30.3
Prupe.7G110000 Prunus persica HOM05D006732 ORTHO05D005682 4.4e-21 106.7 232 35.8
RcHm_v2.0_Chr5g0043731 Rosa chinensis HOM05D018501 ORTHO05D020617 7.6e-21 105.9 265 34.0
RcHm_v2.0_Chr1g0329851 Rosa chinensis HOM05D006732 ORTHO05D005682 2.2e-20 104.4 203 39.4
FAN26G3385 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.8e-20 103.6 140 39.3
RcHm_v2.0_Chr1g0379941 Rosa chinensis HOM05D008398 ORTHO05D005682 6.4e-20 102.8 409 26.9
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 8.4e-20 102.4 279 29.0
FAN19G3146 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-19 101.3 196 38.8
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.4e-19 99.8 167 41.9
RcHm_v2.0_Chr1g0379901 Rosa chinensis HOM05D008398 ORTHO05D005682 5.4e-19 99.8 408 25.7
FAN03G3389 Fragaria x ananassa HOM05D010677 ORTHO05D012678 2.7e-18 97.4 319 28.8
FAN14G4282 Fragaria x ananassa HOM05D013417 ORTHO05D022618 7.8e-18 95.9 352 26.7
FAN23G2570 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-17 95.1 70 54.3
FAN23G1506 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.1e-17 93.2 70 52.9
FvH4_2g38420 Fragaria vesca HOM05D013417 ORTHO05D022618 8.7e-17 92.4 330 27.3
FAN28G1562 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.5e-16 90.9 71 50.7
FAN21G2564 Fragaria x ananassa HOM05D031336 ORTHO05D029596 4.3e-16 90.1 351 25.6
FvH4_4g12220 Fragaria vesca HOM05D013417 ORTHO05D022618 9.6e-16 89.0 318 27.7
FAN10G1111 Fragaria x ananassa HOM05D000122 ORTHO05D000139 1.6e-15 88.2 268 28.4
FAN10G3231 Fragaria x ananassa HOM05D000122 ORTHO05D000139 1.6e-15 88.2 292 27.1
FAN12G2017 Fragaria x ananassa HOM05D013417 ORTHO05D022618 1.6e-15 88.2 314 27.7
FAN12G2010 Fragaria x ananassa HOM05D013417 ORTHO05D022618 2.1e-15 87.8 301 28.9
FAN23G1145 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-15 87.8 65 60.0
FAN19G2055 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.7e-15 86.7 80 53.8
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.4e-14 85.1 231 35.1
FAN28G2349 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-14 84.3 111 40.5
FAN28G2648 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-14 84.3 111 40.5
FvH4_1g04991 Fragaria vesca HOM05D006732 ORTHO05D005682 3.1e-14 84.0 141 43.3
FvH4_6g28610 Fragaria vesca HOM05D008398 ORTHO05D005682 6.9e-14 82.8 230 33.5
FvH4_1g03530 Fragaria vesca HOM05D006732 ORTHO05D005682 1.2e-13 82.0 183 34.4
FAN18G2036 Fragaria x ananassa HOM05D013417 ORTHO05D005682 1.5e-13 81.6 294 28.2
FAN12G0204 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.6e-13 80.9 104 36.5
FAN04G2845 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.3e-12 78.6 272 27.9
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 1.7e-12 78.2 272 28.3
FvH4_5g09162 Fragaria vesca HOM05D006732 ORTHO05D005682 2.2e-12 77.8 82 57.3
Prupe.2G176100 Prunus persica HOM05D006732 ORTHO05D005682 2.2e-12 77.8 213 31.5
Prupe.6G029800 Prunus persica HOM05D006732 ORTHO05D005682 2.2e-12 77.8 166 31.3
FAN12G2497 Fragaria x ananassa HOM05D013417 ORTHO05D005682 2.9e-12 77.4 187 33.2
FAN12G0321 Fragaria x ananassa HOM05D013417 ORTHO05D005682 4.9e-12 76.6 187 33.2
FvH4_7g27001 Fragaria vesca HOM05D010677 ORTHO05D012678 6.4e-12 76.3 271 28.0
FAN09G2688 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.4e-11 75.1 232 33.6
FAN19G1354 Fragaria x ananassa HOM05D006732 ORTHO05D035266 1.9e-11 74.7 194 35.1
FAN22G0443 Fragaria x ananassa HOM05D013417 ORTHO05D005682 1.6e-10 71.6 220 27.7
FvH4_1g04520 Fragaria vesca HOM05D006732 ORTHO05D005682 2.1e-10 71.2 83 45.8
FAN23G1373 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.5e-10 70.5 52 51.9
FvH4_4g06202 Fragaria vesca HOM05D006732 ORTHO05D005682 4.6e-10 70.1 57 42.1
FAN05G1573 Fragaria x ananassa HOM05D008398 ORTHO05D005682 8.7e-09 65.9 177 31.1
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 8.7e-09 65.9 266 25.6
QL02p078454 Quercus lobata HOM05D006732 ORTHO05D005682 4.3e-08 63.5 186 33.9
FAN01G1167 Fragaria x ananassa HOM05D000122 ORTHO05D000139 9.6e-08 62.4 110 31.8
Dinv24221 Davidia involucrata HOM05D015193 ORTHO05D005682 2.8e-07 60.8 217 28.6
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 1.1e-06 58.9 144 27.8
FvH4_1g04910 Fragaria vesca HOM05D006732 ORTHO05D046085 2.4e-06 57.8 54 44.4
DCAR_025514 Daucus carota HOM05D013255 ORTHO05D011422 4.0e-06 57.0 74 40.5
FAN19G2861 Fragaria x ananassa HOM05D006732 ORTHO05D046085 4.0e-06 57.0 51 47.1
CSS0005823 Camellia sinensis var. sinensis HOM05D015193 ORTHO05D005682 9.0e-06 55.8 165 28.5
FAN25G1334 Fragaria x ananassa HOM05D031336 ORTHO05D029596 9.0e-06 55.8 72 43.1
Rhsim04G0245000 Rhododendron simsii HOM05D019272 ORTHO05D020252 9.0e-06 55.8 234 26.1


User provided reference genes

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