Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 6.4e-182 640.6 315 100.0
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-170 603.2 298 99.7
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.5e-134 480.7 302 79.5
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-117 427.2 302 73.8
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-111 407.1 302 69.5
FAN28G0011 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-107 393.7 303 69.3
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 2.5e-77 293.1 254 57.5
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-74 284.3 254 56.7
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 1.2e-74 284.3 256 56.6
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.4e-74 282.3 254 55.9
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.8e-73 279.3 264 53.8
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 8.4e-73 278.1 263 54.0
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 1.1e-72 277.7 258 54.7
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-72 276.9 258 54.7
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-72 276.2 263 53.2
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-71 273.9 256 54.3
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 3.5e-71 272.7 253 54.5
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.3e-70 270.8 288 49.7
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 1.1e-69 267.7 258 53.9
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 7.3e-69 265.0 258 52.3
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 7.3e-69 265.0 258 52.3
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 1.1e-67 261.2 259 51.4
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 9.9e-66 254.6 261 52.1
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 9.3e-64 248.1 250 51.6
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.7e-63 246.5 250 51.2
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-61 241.1 250 50.4
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-61 240.7 259 49.8
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.3e-61 239.2 262 48.9
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.6e-61 238.0 260 48.8
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-59 234.6 234 52.1
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.9e-59 231.9 258 47.7
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.2e-56 222.6 257 46.7
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 3.0e-54 216.5 243 47.7
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 5.1e-54 215.7 247 47.0
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.6e-53 211.5 234 48.3
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-51 207.2 295 41.7
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-51 207.2 295 41.7
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.5e-47 193.0 194 50.0
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.9e-47 191.8 253 45.5
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 4.6e-39 166.0 267 39.3
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 1.1e-35 154.8 241 39.0
FvH4_5g09163 Fragaria vesca HOM05D006732 ORTHO05D005682 1.4e-35 154.5 96 68.8
FAN28G2932 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-35 153.7 216 44.0
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-34 150.6 287 36.6
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.9e-34 149.1 240 40.8
FAN10G1871 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.9e-34 149.1 240 40.8
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.7e-34 148.7 271 38.7
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-33 147.1 270 38.1
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 2.9e-33 146.7 284 36.3
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 3.8e-33 146.4 273 35.9
FvH4_7g04610 Fragaria vesca HOM05D006732 ORTHO05D005682 1.4e-32 144.4 240 40.0
FAN01G2330 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-32 144.1 242 40.5
RcHm_v2.0_Chr1g0380941 Rosa chinensis HOM05D006732 ORTHO05D005682 5.9e-26 122.5 312 30.8
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-25 121.3 284 33.5
FAN19G2055 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-23 114.0 73 72.6
RcHm_v2.0_Chr1g0337091 Rosa chinensis HOM05D010677 ORTHO05D012678 2.7e-23 113.6 233 33.5
FAN26G1044 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.6e-23 113.2 201 38.3
MD02G1004600 Malus domestica HOM05D006732 ORTHO05D005682 1.4e-22 111.3 301 31.9
FAN19G1133 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-22 110.9 271 30.6
FAN23G1145 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.0e-22 110.2 68 72.1
FAN19G3146 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.6e-21 107.1 205 36.1
RcHm_v2.0_Chr1g0337131 Rosa chinensis HOM05D006732 ORTHO05D012678 9.7e-21 105.1 214 33.2
Prupe.7G110000 Prunus persica HOM05D006732 ORTHO05D005682 1.3e-20 104.8 204 35.3
FAN03G3389 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.7e-20 104.4 215 30.2
FAN26G2548 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-20 103.6 142 46.5
FvH4_7g31682 Fragaria vesca HOM05D010677 ORTHO05D012678 4.8e-20 102.8 309 28.8
FvH4_7g31670 Fragaria vesca HOM05D010677 ORTHO05D012678 1.8e-19 100.9 214 29.4
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 3.1e-19 100.1 193 36.8
FvH4_7g31260 Fragaria vesca HOM05D010677 ORTHO05D012678 4.1e-19 99.8 214 29.9
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.1e-19 99.8 165 40.6
Prupe.6G029800 Prunus persica HOM05D006732 ORTHO05D005682 9.1e-19 98.6 196 33.7
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-18 97.4 266 32.7
FAN06G1115 Fragaria x ananassa HOM05D010677 ORTHO05D012678 2.0e-18 97.4 214 29.0
FAN06G1601 Fragaria x ananassa HOM05D010677 ORTHO05D012678 2.0e-18 97.4 214 29.0
FvH4_7g30461 Fragaria vesca HOM05D008398 ORTHO05D035411 4.5e-18 96.3 263 30.8
FAN06G0523 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.0e-17 95.1 263 30.4
FAN06G3627 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.0e-17 95.1 263 30.8
FvH4_7g31320 Fragaria vesca HOM05D010677 ORTHO05D012678 1.7e-17 94.4 217 28.1
FAN04G2845 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.7e-17 94.4 274 29.2
FAN15G3012 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.7e-17 94.4 294 30.6
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 2.2e-17 94.0 277 28.9
FvH4_7g27001 Fragaria vesca HOM05D010677 ORTHO05D012678 5.0e-17 92.8 274 29.2
RcHm_v2.0_Chr5g0043771 Rosa chinensis HOM05D018501 ORTHO05D020617 8.5e-17 92.0 238 28.6
FAN10G1111 Fragaria x ananassa HOM05D000122 ORTHO05D000139 1.5e-16 91.3 296 26.7
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-16 90.9 206 36.4
FvH4_1g03730 Fragaria vesca HOM05D006732 ORTHO05D005682 2.5e-16 90.5 131 41.2
FvH4_3g44180 Fragaria vesca HOM05D031336 ORTHO05D029596 3.2e-16 90.1 251 27.5
FAN11G3653 Fragaria x ananassa HOM05D031336 ORTHO05D029596 3.2e-16 90.1 251 27.5
FvH4_2g38420 Fragaria vesca HOM05D013417 ORTHO05D022618 7.2e-16 89.0 253 32.0
Prupe.2G176100 Prunus persica HOM05D006732 ORTHO05D005682 7.2e-16 89.0 205 33.7
FAN19G1213 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-15 87.8 237 28.7
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 2.1e-15 87.4 271 27.7
RcHm_v2.0_Chr1g0379901 Rosa chinensis HOM05D008398 ORTHO05D005682 2.1e-15 87.4 298 31.9
FvH4_1g03530 Fragaria vesca HOM05D006732 ORTHO05D005682 2.7e-15 87.0 186 34.4
FAN10G0863 Fragaria x ananassa HOM05D008398 ORTHO05D005682 3.6e-15 86.7 262 30.9
RcHm_v2.0_Chr5g0014821 Rosa chinensis HOM05D006732 ORTHO05D005682 4.7e-15 86.3 243 28.8
FvH4_5g34640 Fragaria vesca HOM05D008398 ORTHO05D005682 8.0e-15 85.5 280 32.5
FAN10G3231 Fragaria x ananassa HOM05D000122 ORTHO05D000139 8.0e-15 85.5 272 28.3
RcHm_v2.0_Chr1g0379941 Rosa chinensis HOM05D008398 ORTHO05D005682 1.0e-14 85.1 304 30.6
FAN03G0822 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.4e-14 84.7 173 31.2
RcHm_v2.0_Chr1g0329851 Rosa chinensis HOM05D006732 ORTHO05D005682 2.3e-14 84.0 206 34.0
FAN18G3618 Fragaria x ananassa HOM05D008398 ORTHO05D005682 4.0e-14 83.2 284 29.9
FAN03G2148 Fragaria x ananassa HOM05D018501 ORTHO05D020617 6.7e-14 82.4 260 26.9
FAN10G3802 Fragaria x ananassa HOM05D008398 ORTHO05D035411 2.6e-13 80.5 192 31.8
FAN06G4869 Fragaria x ananassa HOM05D018501 ORTHO05D020617 3.3e-13 80.1 265 27.9
FAN09G2688 Fragaria x ananassa HOM05D008398 ORTHO05D005682 4.4e-13 79.7 293 28.7
FAN06G1563 Fragaria x ananassa HOM05D018501 ORTHO05D020617 7.5e-13 79.0 266 27.8
FAN05G0770 Fragaria x ananassa HOM05D008398 ORTHO05D005682 9.7e-13 78.6 295 30.2
FvH4_6g28610 Fragaria vesca HOM05D008398 ORTHO05D005682 2.2e-12 77.4 231 31.2
FvH4_6g50450 Fragaria vesca HOM05D008398 ORTHO05D005682 2.2e-12 77.4 312 28.8
FvH4_1g04520 Fragaria vesca HOM05D006732 ORTHO05D005682 2.8e-12 77.0 82 43.9
QL02p081954 Quercus lobata HOM05D006732 ORTHO05D005682 2.8e-12 77.0 283 26.1
FAN01G0388 Fragaria x ananassa HOM05D008398 ORTHO05D035411 4.8e-12 76.3 192 31.8
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 4.8e-12 76.3 237 30.8
FAN01G1167 Fragaria x ananassa HOM05D000122 ORTHO05D000139 6.3e-12 75.9 317 24.9
FvH4_6g46861 Fragaria vesca HOM05D015758 ORTHO05D022659 8.2e-12 75.5 223 28.3
FAN06G5012 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.4e-11 74.7 289 24.9
FvH4_7g04500 Fragaria vesca HOM05D018501 ORTHO05D020617 2.4e-11 73.9 245 27.3
FvH4_1g04991 Fragaria vesca HOM05D006732 ORTHO05D005682 4.1e-11 73.2 143 35.7
FvH4_5g09162 Fragaria vesca HOM05D006732 ORTHO05D005682 4.1e-11 73.2 98 42.9
FAN06G3455 Fragaria x ananassa HOM05D010677 ORTHO05D012678 7.0e-11 72.4 296 24.7
FAN15G2539 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.0e-10 70.9 262 30.2
FAN01G2094 Fragaria x ananassa HOM05D008398 ORTHO05D029494 4.5e-10 69.7 269 27.9
Dinv24224 Davidia involucrata HOM05D015193 ORTHO05D005682 1.3e-09 68.2 245 29.4
COL.COLO4_36464 Corchorus olitorius HOM05D006732 ORTHO05D005682 1.7e-09 67.8 144 33.3
FAN14G4819 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.7e-09 67.8 150 34.7
FAN19G1354 Fragaria x ananassa HOM05D006732 ORTHO05D035266 1.7e-09 67.8 197 31.5
QL02p078454 Quercus lobata HOM05D006732 ORTHO05D005682 1.7e-09 67.8 121 34.7
FAN28G2349 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.8e-09 66.6 46 65.2
FAN28G2648 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.8e-09 66.6 46 65.2
FvH4_7g31310 Fragaria vesca HOM05D000122 ORTHO05D012678 5.0e-09 66.2 126 29.4
FAN06G2579 Fragaria x ananassa HOM05D008398 ORTHO05D029494 5.0e-09 66.2 271 28.0
FvH4_1g04850 Fragaria vesca HOM05D006732 ORTHO05D005682 1.5e-08 64.7 69 46.4
FAN03G2566 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.5e-08 64.7 171 31.0
FAN26G3385 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-08 64.3 36 69.4
Dinv24221 Davidia involucrata HOM05D015193 ORTHO05D005682 3.2e-08 63.5 212 27.8
FAN05G1573 Fragaria x ananassa HOM05D008398 ORTHO05D005682 5.5e-08 62.8 203 31.0
FvH4_7g12650 Fragaria vesca HOM05D008398 ORTHO05D029494 7.2e-08 62.4 271 27.3
FAN26G0550 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-07 60.8 52 53.8
FAN26G2691 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-07 60.8 52 53.8
FAN06G0070 Fragaria x ananassa HOM05D008398 ORTHO05D029494 2.7e-07 60.5 271 26.9
Haze_14978 Corylus avellana HOM05D008391 ORTHO05D009743 8.0e-07 58.9 99 35.4
Dinv24217 Davidia involucrata HOM05D003963 ORTHO05D004558 1.4e-06 58.2 161 31.7
QL11p050245 Quercus lobata HOM05D010066 ORTHO05D009743 2.3e-06 57.4 72 40.3
QL93p0284_0002 Quercus lobata HOM05D010066 ORTHO05D009743 2.3e-06 57.4 72 40.3
FvH4_7g28941 Fragaria vesca HOM05D006732 ORTHO05D005682 5.2e-06 56.2 95 37.9
FvH4_4g06201 Fragaria vesca HOM05D006732 ORTHO05D005682 6.8e-06 55.8 102 33.3
QL11p019943 Quercus lobata HOM05D010066 ORTHO05D009743 6.8e-06 55.8 101 34.7


User provided reference genes

Program Settings