Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 3.2e-253 877.9 416 100.0
FAN19G1133 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.1e-208 728.4 401 88.0
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 1.1e-112 411.0 447 55.0
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.8e-111 404.8 446 54.5
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 2.3e-110 403.3 417 55.4
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 2.4e-107 393.3 388 58.0
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-91 341.3 362 55.2
FAN26G1044 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-82 310.8 423 46.1
FAN19G1213 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.7e-63 246.1 407 40.3
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.9e-63 245.4 419 39.9
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-62 243.8 406 40.4
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.9e-62 243.0 400 39.8
FvH4_7g04610 Fragaria vesca HOM05D006732 ORTHO05D005682 1.1e-61 241.5 422 38.9
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.7e-61 239.2 345 42.9
FAN01G2330 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.4e-61 238.8 418 39.5
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 8.2e-60 235.3 421 39.0
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.1e-59 233.0 399 39.3
FvH4_1g03730 Fragaria vesca HOM05D006732 ORTHO05D005682 5.3e-59 232.6 271 54.2
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 5.0e-57 226.1 403 38.0
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.5e-57 225.7 418 39.0
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.5e-56 223.8 419 38.2
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 2.5e-56 223.8 423 38.8
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.7e-55 220.3 402 37.1
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.0e-55 218.8 406 36.0
FAN10G1871 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-54 218.4 312 42.6
FAN23G0757 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-54 217.6 142 78.9
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-54 217.6 398 37.7
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.6e-53 213.8 440 36.1
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 3.3e-53 213.4 413 38.3
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-52 210.7 390 38.5
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-52 210.7 390 38.5
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.3e-52 209.1 425 36.7
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 1.1e-51 208.4 386 37.6
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-51 208.4 418 38.5
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 1.4e-51 208.0 412 37.1
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-51 208.0 414 37.9
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 2.4e-51 207.2 431 36.4
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 2.4e-51 207.2 428 37.1
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.1e-51 206.5 425 35.8
FvH4_6g38540 Fragaria vesca HOM05D006732 ORTHO05D005682 5.3e-51 206.1 422 36.7
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.1e-51 205.3 411 36.0
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 7.7e-50 202.2 419 35.8
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-49 201.8 183 62.3
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 1.3e-49 201.4 394 37.3
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 2.2e-49 200.7 417 35.7
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 3.8e-49 199.9 427 35.8
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.8e-49 199.9 413 35.1
FvH4_1g03530 Fragaria vesca HOM05D006732 ORTHO05D005682 1.9e-48 197.6 222 51.4
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.5e-48 196.1 353 38.2
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 9.4e-48 195.3 344 39.0
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 1.0e-46 191.8 363 38.8
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-46 191.8 363 38.8
FAN19G1354 Fragaria x ananassa HOM05D006732 ORTHO05D035266 5.7e-45 186.0 179 58.7
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-44 184.1 363 37.7
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.3e-44 182.6 362 34.5
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.4e-43 179.5 377 35.3
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.7e-42 177.2 409 33.5
FvH4_1g04991 Fragaria vesca HOM05D006732 ORTHO05D005682 1.7e-41 174.5 153 62.7
FAN26G3385 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-41 174.5 157 58.0
FAN28G1694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.8e-41 173.3 178 55.1
FAN19G1906 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.2e-40 169.9 152 57.2
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-39 167.9 416 32.2
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-38 164.5 413 31.0
FAN28G2349 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-37 161.4 123 64.2
FAN28G2648 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-37 161.4 123 64.2
FAN23G1684 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.6e-37 160.6 189 51.3
FAN23G1741 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.7e-37 159.5 325 35.1
RcHm_v2.0_Chr1g0329851 Rosa chinensis HOM05D006732 ORTHO05D005682 1.2e-34 151.8 189 46.0
FvH4_1g03720 Fragaria vesca HOM05D006732 ORTHO05D035266 7.8e-34 149.1 146 58.2
FAN28G0011 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.8e-34 149.1 408 29.9
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 5.0e-33 146.4 273 35.9
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.5e-32 144.1 377 31.6
FvH4_5g09163 Fragaria vesca HOM05D006732 ORTHO05D005682 8.0e-31 139.0 229 38.4
FAN26G2548 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.0e-23 112.5 332 31.3
FvH4_1g04850 Fragaria vesca HOM05D006732 ORTHO05D005682 4.4e-21 106.7 189 37.0
FvH4_4g06201 Fragaria vesca HOM05D006732 ORTHO05D005682 9.8e-21 105.5 108 55.6
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 2.2e-20 104.4 367 29.7
FAN26G2691 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.4e-20 102.8 186 36.6
RcHm_v2.0_Chr2g0090141 Rosa chinensis HOM05D006732 ORTHO05D005682 3.5e-18 97.1 183 38.3
FAN26G0550 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.0e-18 96.3 168 36.9
MD02G1004600 Malus domestica HOM05D006732 ORTHO05D005682 1.0e-17 95.5 286 30.4
FAN03G3389 Fragaria x ananassa HOM05D010677 ORTHO05D012678 2.3e-17 94.4 234 32.5
RcHm_v2.0_Chr5g0043731 Rosa chinensis HOM05D018501 ORTHO05D020617 5.0e-17 93.2 381 28.1
FAN23G0993 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-16 91.7 162 36.4
FAN28G2932 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.3e-16 90.5 203 33.5
FAN06G4869 Fragaria x ananassa HOM05D018501 ORTHO05D020617 5.6e-16 89.7 317 28.4
FvH4_1g03820 Fragaria vesca HOM05D006732 ORTHO05D005682 7.3e-16 89.4 120 50.0
FAN03G1932 Fragaria x ananassa HOM05D018501 ORTHO05D020617 7.3e-16 89.4 311 29.6
FAN06G1563 Fragaria x ananassa HOM05D018501 ORTHO05D020617 7.3e-16 89.4 317 28.7
FvH4_3g44180 Fragaria vesca HOM05D031336 ORTHO05D029596 9.5e-16 89.0 343 26.5
FvH4_7g04500 Fragaria vesca HOM05D018501 ORTHO05D020617 9.5e-16 89.0 319 28.2
FAN11G3653 Fragaria x ananassa HOM05D031336 ORTHO05D029596 9.5e-16 89.0 343 26.5
RcHm_v2.0_Chr1g0379901 Rosa chinensis HOM05D008398 ORTHO05D005682 9.5e-16 89.0 347 27.7
RcHm_v2.0_Chr5g0043771 Rosa chinensis HOM05D018501 ORTHO05D020617 1.6e-15 88.2 308 29.2
FvH4_5g34640 Fragaria vesca HOM05D008398 ORTHO05D005682 3.6e-15 87.0 324 25.3
RcHm_v2.0_Chr1g0379941 Rosa chinensis HOM05D008398 ORTHO05D005682 6.2e-15 86.3 346 27.2
FAN12G0204 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-14 85.1 112 44.6
FAN03G2148 Fragaria x ananassa HOM05D018501 ORTHO05D020617 3.1e-14 84.0 314 28.0
FAN26G3406 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.9e-14 82.4 213 29.1
FvH4_7g31260 Fragaria vesca HOM05D010677 ORTHO05D012678 1.2e-13 82.0 249 28.1
FAN03G3290 Fragaria x ananassa HOM05D005400 ORTHO05D006668 4.4e-13 80.1 416 25.5
FAN05G0770 Fragaria x ananassa HOM05D008398 ORTHO05D005682 4.4e-13 80.1 325 24.9
FAN06G1115 Fragaria x ananassa HOM05D010677 ORTHO05D012678 5.8e-13 79.7 249 27.7
FAN06G1601 Fragaria x ananassa HOM05D010677 ORTHO05D012678 5.8e-13 79.7 249 27.7
FvH4_7g31682 Fragaria vesca HOM05D010677 ORTHO05D012678 7.5e-13 79.3 284 27.8
RcHm_v2.0_Chr2g0089871 Rosa chinensis HOM05D006732 ORTHO05D005682 7.5e-13 79.3 158 37.3
FvH4_7g31670 Fragaria vesca HOM05D010677 ORTHO05D012678 1.3e-12 78.6 283 29.0
FvH4_6g52510 Fragaria vesca HOM05D013417 ORTHO05D022618 4.9e-12 76.6 335 26.6
FvH4_7g30731 Fragaria vesca HOM05D008398 ORTHO05D035236 4.9e-12 76.6 278 28.1
RcHm_v2.0_Chr1g0337091 Rosa chinensis HOM05D010677 ORTHO05D012678 8.3e-12 75.9 223 30.5
FvH4_3g43023 Fragaria vesca HOM05D015758 ORTHO05D022659 1.1e-11 75.5 413 23.2
RcHm_v2.0_Chr1g0380941 Rosa chinensis HOM05D006732 ORTHO05D005682 1.4e-11 75.1 335 25.4
RcHm_v2.0_Chr1g0337131 Rosa chinensis HOM05D006732 ORTHO05D012678 1.9e-11 74.7 217 30.4
FvH4_7g31320 Fragaria vesca HOM05D010677 ORTHO05D012678 2.4e-11 74.3 233 27.0
FAN15G3012 Fragaria x ananassa HOM05D010677 ORTHO05D012678 9.2e-11 72.4 216 27.8
FAN15G2539 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.2e-10 72.0 331 25.1
FAN06G1253 Fragaria x ananassa HOM05D008398 ORTHO05D035236 2.1e-10 71.2 184 32.1
FAN04G2845 Fragaria x ananassa HOM05D010677 ORTHO05D012678 4.6e-10 70.1 303 26.7
Prupe.6G029800 Prunus persica HOM05D006732 ORTHO05D005682 4.6e-10 70.1 196 28.6
FAN06G1826 Fragaria x ananassa HOM05D008398 ORTHO05D035236 1.0e-09 68.9 184 31.5
FAN23G1145 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-09 68.9 73 47.9
FAN10G1111 Fragaria x ananassa HOM05D000122 ORTHO05D000139 1.7e-09 68.2 242 27.3
FvH4_7g31310 Fragaria vesca HOM05D000122 ORTHO05D012678 3.9e-09 67.0 106 34.0
FvH4_6g28610 Fragaria vesca HOM05D008398 ORTHO05D005682 5.1e-09 66.6 255 26.7
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.1e-09 66.6 255 27.5
FAN06G3455 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.5e-08 65.1 284 25.4
FvH4_6g46861 Fragaria vesca HOM05D015758 ORTHO05D022659 4.3e-08 63.5 329 27.4
FAN06G5012 Fragaria x ananassa HOM05D010677 ORTHO05D012678 5.6e-08 63.2 294 24.5
FvH4_7g27001 Fragaria vesca HOM05D010677 ORTHO05D012678 1.2e-07 62.0 212 27.4
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 1.2e-07 62.0 212 27.4
FAN03G0822 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.6e-07 61.6 164 31.1
FAN01G1167 Fragaria x ananassa HOM05D000122 ORTHO05D000139 2.8e-07 60.8 108 33.3
FvH4_5g09162 Fragaria vesca HOM05D006732 ORTHO05D005682 4.7e-07 60.1 96 39.6
QL02p078454 Quercus lobata HOM05D006732 ORTHO05D005682 3.1e-06 57.4 192 29.2
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 4.0e-06 57.0 181 28.7
Dinv24224 Davidia involucrata HOM05D015193 ORTHO05D005682 6.8e-06 56.2 192 28.1


User provided reference genes

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