Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g03730 Fragaria vesca HOM05D006732 ORTHO05D005682 5.3e-147 524.2 247 100.0
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 6.9e-131 470.7 249 90.4
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 2.9e-113 412.1 249 79.5
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-112 408.7 249 78.3
FAN26G1044 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-110 402.5 215 89.3
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.0e-94 348.6 180 91.1
FAN23G1684 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.8e-86 320.9 184 82.6
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.5e-72 276.9 261 59.0
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 7.1e-59 231.5 271 54.2
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-51 206.1 264 45.8
FvH4_6g38540 Fragaria vesca HOM05D006732 ORTHO05D005682 1.6e-50 203.8 264 45.5
FAN19G1133 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-44 183.7 245 48.6
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.2e-43 179.1 263 41.8
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 2.7e-42 176.4 261 40.2
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 6.0e-42 175.3 264 40.5
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.3e-41 174.1 270 40.0
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.7e-41 171.4 264 40.2
FAN28G1694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.7e-41 171.4 166 59.0
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-40 171.0 264 40.5
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.3e-40 169.1 258 38.0
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.6e-40 168.7 255 37.6
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-39 167.5 266 37.6
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-39 166.4 258 39.1
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.6e-39 166.0 258 39.1
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.6e-39 166.0 258 39.5
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.6e-39 166.0 258 39.5
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 6.2e-39 165.2 261 39.5
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 4.0e-38 162.5 262 38.5
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 1.5e-37 160.6 259 38.6
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-37 160.2 265 37.0
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.4e-37 159.5 265 36.6
FAN19G1213 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.8e-37 158.7 190 50.0
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 7.6e-37 158.3 265 36.2
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 7.6e-37 158.3 265 36.6
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.6e-37 158.3 264 36.4
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-36 157.1 257 36.6
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.8e-36 156.0 261 37.5
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.4e-36 155.2 263 36.5
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 1.4e-35 154.1 265 36.2
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 1.9e-35 153.7 263 36.5
FAN19G1906 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-35 153.3 143 59.4
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.2e-35 152.5 226 42.9
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.7e-34 149.8 256 36.3
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 4.6e-34 149.1 258 37.2
FAN28G0011 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.1e-33 145.6 253 36.8
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.7e-33 144.8 261 37.2
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 8.7e-33 144.8 261 35.6
FAN01G2330 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-32 144.4 255 38.8
FvH4_7g04610 Fragaria vesca HOM05D006732 ORTHO05D005682 2.8e-31 139.8 257 38.9
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.6e-31 139.4 257 39.3
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.6e-31 139.4 257 39.3
FvH4_5g09163 Fragaria vesca HOM05D006732 ORTHO05D005682 1.1e-30 137.9 229 36.7
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.3e-30 135.6 245 40.0
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.0e-30 134.8 256 34.8
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-29 134.4 258 34.1
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 3.8e-28 129.4 227 35.7
FAN23G1741 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.4e-28 128.3 117 60.7
FAN26G3385 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-27 126.3 144 54.2
FAN12G0204 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.5e-27 125.6 104 62.5
FAN28G2349 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-26 124.0 126 57.9
FAN28G2648 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-26 124.0 126 57.9
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-26 123.6 229 37.1
FAN26G2691 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-23 113.2 177 37.9
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 1.2e-21 107.8 181 38.1
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-21 107.8 181 38.1
FvH4_1g04850 Fragaria vesca HOM05D006732 ORTHO05D005682 2.6e-21 106.7 176 38.1
RcHm_v2.0_Chr2g0090141 Rosa chinensis HOM05D006732 ORTHO05D005682 4.9e-20 102.4 155 38.1
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.5e-20 102.1 181 36.5
RcHm_v2.0_Chr2g0089871 Rosa chinensis HOM05D006732 ORTHO05D005682 4.2e-19 99.4 147 39.5
FAN26G0550 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-18 97.8 169 34.9
FAN10G1871 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-18 97.4 165 40.6
FvH4_4g06202 Fragaria vesca HOM05D006732 ORTHO05D005682 2.7e-18 96.7 60 71.7
FAN26G2548 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-17 94.4 256 29.7
FAN23G0993 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.9e-17 92.8 163 33.7
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 3.3e-16 89.7 131 41.2
FvH4_1g07301 Fragaria vesca HOM05D006732 ORTHO05D005682 3.1e-14 83.2 102 43.1
FAN23G1373 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.1e-14 82.8 50 76.0
FvH4_1g03530 Fragaria vesca HOM05D006732 ORTHO05D005682 5.3e-14 82.4 90 55.6
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-12 77.0 63 66.7
FAN26G3406 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-12 77.0 204 26.5
FAN08G2174 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.5e-12 75.5 101 37.6
FAN23G1506 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.2e-11 72.0 53 52.8
FAN23G2570 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.2e-11 72.0 53 52.8
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 1.0e-09 68.2 278 28.1
RcHm_v2.0_Chr2g0090221 Rosa chinensis HOM05D006732 ORTHO05D005682 1.6e-07 60.8 193 25.9
RcHm_v2.0_Chr1g0329851 Rosa chinensis HOM05D006732 ORTHO05D005682 3.7e-07 59.7 68 48.5
FAN28G1562 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.8e-07 59.3 54 46.3


User provided reference genes

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