Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g03660 Fragaria vesca HOM05D036469 ORTHO05D010672 1.8e-96 357.1 396 100.0
FAN19G1720 Fragaria x ananassa HOM05D036469 ORTHO05D010672 6.2e-81 305.4 402 90.8
FAN05G1812 Fragaria x ananassa HOM05D036469 ORTHO05D010672 3.0e-75 286.6 417 86.1
Potri.003G179301 Populus trichocarpa HOM05D010060 ORTHO05D010672 8.2e-17 92.4 104 64.4
Prupe.3G095500 Prunus persica HOM05D010060 ORTHO05D010672 1.1e-16 92.0 109 65.1
Thecc.06G037600 Theobroma cacao HOM05D010060 ORTHO05D010672 5.0e-14 83.2 108 47.2
Sabra03G0131400 Salix brachista HOM05D010060 ORTHO05D010672 3.2e-13 80.5 99 57.6
COL.COLO4_26651 Corchorus olitorius HOM05D010060 ORTHO05D010672 8.8e-11 72.4 37 81.1
CiPaw.02G160700 Carya illinoinensis HOM05D010060 ORTHO05D010672 2.0e-10 71.2 38 73.7
Aa31LG7G430 Aethionema arabicum HOM05D012449 ORTHO05D010672 4.4e-10 70.1 121 38.8
Carub.0001s1564 Capsella rubella HOM05D012449 ORTHO05D010672 5.7e-10 69.7 113 40.7
Nn8g39734 Nelumbo nucifera HOM05D010060 ORTHO05D010672 5.7e-10 69.7 36 75.0
CANSAT56G0640 Cannabis sativa HOM05D010060 ORTHO05D010672 9.7e-10 68.9 108 56.5
Gohir.A05G121000 Gossypium hirsutum HOM05D010060 ORTHO05D010672 2.8e-09 67.4 107 57.0
Gorai.009G125500 Gossypium raimondii HOM05D010060 ORTHO05D010672 4.8e-09 66.6 107 57.9
MELO3C017856.2 Cucumis melo HOM05D010060 ORTHO05D010672 2.4e-08 64.3 104 41.3
Gohir.D05G122000 Gossypium hirsutum HOM05D010060 ORTHO05D010672 2.4e-08 64.3 108 39.8
C08p44730 Brassica napus HOM05D012449 ORTHO05D010672 1.2e-07 62.0 36 69.4
BolC8t52019H Brassica oleracea HOM05D012449 ORTHO05D010672 1.2e-07 62.0 36 69.4
Cc04_g04840 Coffea canephora HOM05D013655 ORTHO05D010672 1.2e-07 62.0 39 69.2
Oeu010090.1 Olea europaea HOM05D013655 ORTHO05D010672 1.2e-07 62.0 105 53.3
BcaB03g14516 Brassica carinata HOM05D012449 ORTHO05D010672 1.5e-07 61.6 39 66.7
ClCG07G012370 Citrullus lanatus HOM05D010060 ORTHO05D010672 1.5e-07 61.6 104 39.4
PSO832G3355 Papaver somniferum HOM05D010060 ORTHO05D010672 2.6e-07 60.8 36 66.7
BcaC07g41475 Brassica carinata HOM05D012449 ORTHO05D010672 3.5e-07 60.5 34 70.6
THA.LOC104813310 Tarenaya hassleriana HOM05D010060 ORTHO05D010672 5.9e-07 59.7 109 36.7
AL1G27990 Arabidopsis lyrata HOM05D012449 ORTHO05D010672 7.7e-07 59.3 36 66.7
arahy.Tifrunner.gnm1.ann1.14Y83U Arachis hypogaea HOM05D010060 ORTHO05D010672 7.7e-07 59.3 39 61.5
VMungo0331G1910 Vigna mungo HOM05D012449 ORTHO05D010672 7.7e-07 59.3 36 66.7
A09p61130 Brassica napus HOM05D012449 ORTHO05D010672 1.3e-06 58.5 106 34.9
BraA09t41487Z Brassica rapa HOM05D012449 ORTHO05D010672 1.3e-06 58.5 106 34.9
Manes.04G105502 Manihot esculenta HOM05D010060 ORTHO05D010672 1.7e-06 58.2 105 49.5
DCAR_025534 Daucus carota HOM05D010060 ORTHO05D010672 6.5e-06 56.2 39 56.4
Migut.I00723 Erythranthe guttata HOM05D013655 ORTHO05D010672 8.5e-06 55.8 38 65.8
Solyc03g117190.1 Solanum lycopersicum HOM05D013655 ORTHO05D010672 8.5e-06 55.8 39 64.1


User provided reference genes

Program Settings