Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g03220 Fragaria vesca HOM05D000039 ORTHO05D197256 9.0e-37 156.4 77 100.0
FvH4_1g03202 Fragaria vesca HOM05D000039 ORTHO05D000370 2.1e-09 65.5 35 85.7
FAN23G2899 Fragaria x ananassa HOM05D000039 ORTHO05D000370 2.1e-09 65.5 35 85.7
RcHm_v2.0_Chr2g0088361 Rosa chinensis HOM05D000039 ORTHO05D000370 2.1e-09 65.5 35 85.7
FAN26G3027 Fragaria x ananassa HOM05D000039 ORTHO05D000370 2.7e-09 65.1 35 85.7
FAN19G1385 Fragaria x ananassa HOM05D000039 ORTHO05D000370 4.6e-09 64.3 35 82.9
CiPaw.03G244300 Carya illinoinensis HOM05D000039 ORTHO05D000370 3.9e-08 61.2 35 77.1
Lalb_Chr11g0072141 Lupinus albus HOM05D000039 ORTHO05D000370 3.9e-08 61.2 35 77.1
Nn8g39455 Nelumbo nucifera HOM05D000039 ORTHO05D000370 5.1e-08 60.8 35 77.1
Cfa003380 Carpinus fangiana HOM05D000039 ORTHO05D000370 6.7e-08 60.5 35 77.1
Oeu031071.1 Olea europaea HOM05D000039 ORTHO05D000370 8.8e-08 60.1 34 79.4
QL02p088527 Quercus lobata HOM05D000039 ORTHO05D000370 8.8e-08 60.1 35 77.1
Aqoxy7G02185 Aquilegia oxysepala HOM05D000039 ORTHO05D000370 1.1e-07 59.7 48 60.4
Lj7C628G7 Lonicera japonica HOM05D000039 ORTHO05D000370 1.1e-07 59.7 35 71.4
Cc06_g08460 Coffea canephora HOM05D000039 ORTHO05D000370 2.0e-07 58.9 35 74.3
Hma1.2p1_0018F.1_g012370 Hydrangea macrophylla HOM05D000039 ORTHO05D000370 2.6e-07 58.5 35 71.4
Os01g0172600 Oryza sativa ssp. japonica HOM05D000039 ORTHO05D000370 2.6e-07 58.5 35 71.4
Rhsim03G0248100 Rhododendron simsii HOM05D000039 ORTHO05D000370 2.6e-07 58.5 35 71.4
A03p23290 Brassica napus HOM05D000039 ORTHO05D000370 3.3e-07 58.2 36 69.4
HanXRQChr10g0315521 Helianthus annuus HOM05D000039 ORTHO05D000370 3.3e-07 58.2 48 54.2
Lj1g0005997 Lotus japonicus HOM05D000039 ORTHO05D000370 3.3e-07 58.2 35 71.4
AT2G41480 Arabidopsis thaliana HOM05D000039 ORTHO05D000370 4.4e-07 57.8 35 74.3
Carub.0004s2378 Capsella rubella HOM05D000039 ORTHO05D000370 4.4e-07 57.8 35 74.3
CARHR136600 Cardamine hirsuta HOM05D000039 ORTHO05D000370 4.4e-07 57.8 35 74.3
Sp4g23750 Schrenkiella parvula HOM05D000039 ORTHO05D000370 4.4e-07 57.8 35 74.3
vmacro06131 Vaccinium macrocarpon HOM05D000039 ORTHO05D000370 4.4e-07 57.8 35 68.6
Actinidia26392 Actinidia chinensis HOM05D000039 ORTHO05D000370 5.7e-07 57.4 35 71.4
Gohir.D05G017400 Gossypium hirsutum HOM05D000039 ORTHO05D000370 5.7e-07 57.4 35 71.4
Gorai.009G017700 Gossypium raimondii HOM05D000039 ORTHO05D000370 5.7e-07 57.4 35 71.4
Lj4g0000110 Lotus japonicus HOM05D000039 ORTHO05D000370 5.7e-07 57.4 35 74.3
PSO170G0849 Papaver somniferum HOM05D000039 ORTHO05D000370 5.7e-07 57.4 38 68.4
PSO455G0264 Papaver somniferum HOM05D000039 ORTHO05D000370 5.7e-07 57.4 38 68.4
Phvul.009G197100 Phaseolus vulgaris HOM05D000039 ORTHO05D000370 5.7e-07 57.4 35 71.4
Prupe.7G243400 Prunus persica HOM05D000039 ORTHO05D000370 5.7e-07 57.4 35 74.3
TAR383G0225 Trochodendron aralioides HOM05D000039 ORTHO05D000370 5.7e-07 57.4 35 71.4
Atru.chr7.1154 Acer truncatum HOM05D000039 ORTHO05D000370 7.4e-07 57.0 35 74.3
AL4G39570 Arabidopsis lyrata HOM05D000039 ORTHO05D000370 7.4e-07 57.0 35 74.3
AUR62011133 Chenopodium quinoa HOM05D000039 ORTHO05D000370 7.4e-07 57.0 35 71.4
Ca_21680_v3 Cicer arietinum L. HOM05D000039 ORTHO05D000370 7.4e-07 57.0 33 75.8
BcaB01g03466 Brassica carinata HOM05D000039 ORTHO05D000370 9.7e-07 56.6 35 71.4
BcaC01g05334 Brassica carinata HOM05D000039 ORTHO05D000370 9.7e-07 56.6 35 71.4
C03p27800 Brassica napus HOM05D000039 ORTHO05D000370 9.7e-07 56.6 35 71.4
Ciclev10008925m.g Citrus clementina HOM05D000039 ORTHO05D000370 9.7e-07 56.6 35 71.4
Medtr4g114210 Medicago truncatula HOM05D000039 ORTHO05D000370 9.7e-07 56.6 35 68.6
SEGI_32958 Sequoiadendron giganteum HOM05D000039 ORTHO05D000370 9.7e-07 56.6 34 73.5
Thecc.09G126800 Theobroma cacao HOM05D000039 ORTHO05D000370 9.7e-07 56.6 35 68.6
AUR62013354 Chenopodium quinoa HOM05D000039 ORTHO05D000370 1.3e-06 56.2 35 71.4
Duzib187G0245 Durio zibethinus HOM05D000039 ORTHO05D000370 1.3e-06 56.2 35 68.6
ECA234G0808 Erigeron canadensis HOM05D000039 ORTHO05D000370 1.3e-06 56.2 35 65.7
TPR.G10701 Trifolium pratense HOM05D000039 ORTHO05D000370 1.3e-06 56.2 35 71.4
GSVIVG01015537001 Vitis vinifera HOM05D000039 ORTHO05D000370 1.3e-06 56.2 35 71.4
arahy.Tifrunner.gnm1.ann1.APG05N Arachis hypogaea HOM05D000039 ORTHO05D000370 1.7e-06 55.8 34 70.6
arahy.Tifrunner.gnm1.ann1.QV6DWR Arachis hypogaea HOM05D000039 ORTHO05D000370 1.7e-06 55.8 34 70.6
Manes.14G132500 Manihot esculenta HOM05D000039 ORTHO05D000370 1.7e-06 55.8 35 68.6
Peaxi162Scf00148g00093 Petunia axillaris HOM05D000039 ORTHO05D000370 1.7e-06 55.8 35 68.6
A04p31650 Brassica napus HOM05D000039 ORTHO05D000370 2.2e-06 55.5 35 71.4
C04p69080 Brassica napus HOM05D000039 ORTHO05D000370 2.2e-06 55.5 35 71.4
BolC4t28405H Brassica oleracea HOM05D000039 ORTHO05D000370 2.2e-06 55.5 35 71.4
BraA04t18623Z Brassica rapa HOM05D000039 ORTHO05D000370 2.2e-06 55.5 35 71.4
Thhalv10016924m.g Eutrema salsugineum HOM05D000039 ORTHO05D000370 2.2e-06 55.5 35 71.4
Nitab4.5_0003097g0010 Nicotiana tabacum HOM05D000039 ORTHO05D000370 2.2e-06 55.5 35 71.4
Gohir.A05G016400 Gossypium hirsutum HOM05D000039 ORTHO05D000370 2.8e-06 55.1 35 68.6
SalBow1G4482 Salvia bowleyana HOM05D000039 ORTHO05D000370 2.8e-06 55.1 35 65.7
SEGI_07413 Sequoiadendron giganteum HOM05D000039 ORTHO05D000370 2.8e-06 55.1 34 70.6
THA.LOC104826546 Tarenaya hassleriana HOM05D000039 ORTHO05D000370 2.8e-06 55.1 40 60.0
Nitab4.5_0001417g0090 Nicotiana tabacum HOM05D000039 ORTHO05D000370 4.8e-06 54.3 35 68.6
VMungo1309G2067 Vigna mungo HOM05D004174 ORTHO05D004624 4.8e-06 54.3 35 68.6
Aa31LG1G23500 Aethionema arabicum HOM05D000039 ORTHO05D000370 6.3e-06 53.9 35 68.6
Glyma.06G221700 Glycine max HOM05D000039 ORTHO05D000370 6.3e-06 53.9 35 68.6
ClCG06G011140 Citrullus lanatus HOM05D000039 ORTHO05D000370 8.2e-06 53.5 35 65.7
MD15G1172800 Malus domestica HOM05D000039 ORTHO05D000370 8.2e-06 53.5 35 68.6
Sc08g0006590 Simmondsia chinensis HOM05D000039 ORTHO05D000370 8.2e-06 53.5 34 67.6
PGSC0003DMG400025478 Solanum tuberosum HOM05D000039 ORTHO05D000370 8.2e-06 53.5 35 65.7
TWI63G0202 Tripterygium wilfordii HOM05D000039 ORTHO05D000370 8.2e-06 53.5 35 65.7


User provided reference genes

Program Settings