Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g01840 Fragaria vesca HOM05D022859 ORTHO05D009278 1.5e-69 266.2 140 100.0
FAN28G1648 Fragaria x ananassa HOM05D022859 ORTHO05D009278 2.1e-68 262.3 140 98.6
FAN19G1896 Fragaria x ananassa HOM05D022859 ORTHO05D009278 3.9e-62 241.5 182 75.8
FAN26G0562 Fragaria x ananassa HOM05D022859 ORTHO05D009278 1.6e-55 219.5 198 67.7
RcHm_v2.0_Chr2g0086811 Rosa chinensis HOM05D022859 ORTHO05D009278 9.0e-27 124.0 115 62.6
MD15G1160900 Malus domestica HOM05D007673 ORTHO05D009278 4.9e-25 118.2 164 50.0
MD02G1016300 Malus domestica HOM05D007673 ORTHO05D009278 1.5e-21 106.7 169 46.2
Prupe.7G256100 Prunus persica HOM05D007673 ORTHO05D009278 2.0e-18 96.3 178 44.9
Sabra06G0043300 Salix brachista HOM05D007673 ORTHO05D009278 7.1e-16 87.8 163 47.2
TAR383G0338 Trochodendron aralioides HOM05D007673 ORTHO05D009278 1.8e-14 83.2 161 41.6
Lalb_Chr13g0301271 Lupinus albus HOM05D007673 ORTHO05D009278 1.5e-13 80.1 161 37.3
Lalb_Chr07g0179441 Lupinus albus HOM05D007673 ORTHO05D009278 1.9e-13 79.7 160 40.6
CiPaw.16G118400 Carya illinoinensis HOM05D007673 ORTHO05D009278 7.4e-13 77.8 166 42.2
Medtr4g116360 Medicago truncatula HOM05D007673 ORTHO05D009278 2.8e-12 75.9 153 37.9
Glyma.17G106100 Glycine max HOM05D007673 ORTHO05D009278 3.7e-12 75.5 146 37.7
QL02p091069 Quercus lobata HOM05D007673 ORTHO05D009278 4.8e-12 75.1 162 38.3
Dinv41432 Davidia involucrata HOM05D007673 ORTHO05D009278 1.4e-11 73.6 154 40.3
Lj6g0015094 Lotus japonicus HOM05D007673 ORTHO05D009278 2.4e-11 72.8 144 41.0
Potri.006G060000 Populus trichocarpa HOM05D007673 ORTHO05D009278 3.1e-11 72.4 160 40.0
Phvul.003G173600 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 5.3e-11 71.6 145 36.6
TAR625G1436 Trochodendron aralioides HOM05D007673 ORTHO05D009278 5.3e-11 71.6 163 38.0
Aqoxy7G03558 Aquilegia oxysepala HOM05D007673 ORTHO05D009278 9.0e-11 70.9 167 41.9
CiPaw.15G183400 Carya illinoinensis HOM05D007673 ORTHO05D009278 9.0e-11 70.9 166 36.1
COL.COLO4_24126 Corchorus olitorius HOM05D007673 ORTHO05D009278 9.0e-11 70.9 171 36.3
GSVIVG01012874001 Vitis vinifera HOM05D007673 ORTHO05D009278 9.0e-11 70.9 152 35.5
Dinv43178 Davidia involucrata HOM05D007673 ORTHO05D009278 1.2e-10 70.5 137 39.4
Thecc.09G139900 Theobroma cacao HOM05D007673 ORTHO05D009278 1.2e-10 70.5 161 39.1
Glyma.13G165000 Glycine max HOM05D007673 ORTHO05D009278 2.0e-10 69.7 146 37.0
Potri.018G115601 Populus trichocarpa HOM05D007673 ORTHO05D009278 2.6e-10 69.3 163 38.7
TPR.G15789 Trifolium pratense HOM05D007673 ORTHO05D009278 2.6e-10 69.3 154 35.1
MBI14_g03622_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 3.4e-10 68.9 146 39.7
Manes.06G043400 Manihot esculenta HOM05D007673 ORTHO05D009278 3.4e-10 68.9 157 38.9
Psat0s503g0080 Pisum sativum HOM05D007673 ORTHO05D009278 7.6e-10 67.8 134 39.6
Psat0s5432g0040 Pisum sativum HOM05D007673 ORTHO05D009278 7.6e-10 67.8 134 39.6
Nn2g12220 Nelumbo nucifera HOM05D007673 ORTHO05D009278 1.3e-09 67.0 163 37.4
Phvul.009G210216 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 2.2e-09 66.2 154 36.4
VMungo1215G2163 Vigna mungo HOM05D007673 ORTHO05D009278 3.8e-09 65.5 142 37.3
TWI32G1294 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 6.5e-09 64.7 148 37.2
Medtr2g450420 Medicago truncatula HOM05D007673 ORTHO05D009278 3.2e-08 62.4 153 34.6
TWI34G1167 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 3.2e-08 62.4 147 36.1
Nn8g39681 Nelumbo nucifera HOM05D007673 ORTHO05D009278 5.5e-08 61.6 162 35.8
Manes.14G120200 Manihot esculenta HOM05D007673 ORTHO05D009278 1.2e-07 60.5 165 35.8
arahy.Tifrunner.gnm1.ann1.5L22XG Arachis hypogaea HOM05D007673 ORTHO05D009278 2.1e-07 59.7 160 30.6
CSS0039366 Camellia sinensis var. sinensis HOM05D007673 ORTHO05D009278 2.1e-07 59.7 165 32.1
Solyc07g007270.3 Solanum lycopersicum HOM05D007673 ORTHO05D009278 2.1e-07 59.7 99 40.4
Psat4g035400 Pisum sativum HOM05D007673 ORTHO05D009278 2.7e-07 59.3 137 31.4
HanXRQChr09g0243101 Helianthus annuus HOM05D007673 ORTHO05D009278 3.6e-07 58.9 156 34.0
Sopen07g003330 Solanum pennellii HOM05D007673 ORTHO05D009278 1.3e-06 57.0 99 38.4
PGSC0003DMG400030693 Solanum tuberosum HOM05D007673 ORTHO05D009278 1.3e-06 57.0 98 38.8
AUR62011243 Chenopodium quinoa HOM05D022392 ORTHO05D009278 1.8e-06 56.6 172 32.6
SalBow1G8253 Salvia bowleyana HOM05D007673 ORTHO05D009278 1.8e-06 56.6 137 30.7
VMungo1309G0908 Vigna mungo HOM05D007673 ORTHO05D009278 1.8e-06 56.6 151 33.8
Actinidia04238 Actinidia chinensis HOM05D007673 ORTHO05D009278 2.3e-06 56.2 159 32.1
Peaxi162Scf00088g00016 Petunia axillaris HOM05D007673 ORTHO05D009278 2.3e-06 56.2 159 33.3
Sed0013238 Sechium edule HOM05D007673 ORTHO05D009278 2.3e-06 56.2 136 34.6
Zm00001eb431970 Zea mays HOM05D037963 ORTHO05D037155 2.3e-06 56.2 167 24.6
PSO170G6343 Papaver somniferum HOM05D007673 ORTHO05D009278 3.0e-06 55.8 166 34.9
AUR62041460 Chenopodium quinoa HOM05D022392 ORTHO05D009278 5.1e-06 55.1 181 33.7
Rhsim01G0051900 Rhododendron simsii HOM05D007673 ORTHO05D009278 6.7e-06 54.7 177 31.1
Actinidia21918 Actinidia chinensis HOM05D007673 ORTHO05D009278 8.7e-06 54.3 148 30.4


User provided reference genes

Program Settings