Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 2.1e-299 1031.6 519 100.0
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.4e-295 1018.8 521 99.0
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.3e-293 1012.3 521 98.8
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 7.3e-292 1006.5 522 97.5
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 1.3e-280 969.1 522 94.1
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.3e-259 899.4 523 89.9
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 3.2e-239 831.6 547 79.9
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 1.3e-224 783.1 547 76.4
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 2.1e-222 775.8 546 75.5
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 5.6e-199 698.0 544 69.9
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 3.4e-196 688.7 548 69.3
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 4.6e-193 678.3 564 66.5
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 3.9e-192 675.2 549 68.5
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 3.3e-191 672.2 561 66.7
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 9.6e-191 670.6 567 65.3
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 3.6e-190 668.7 546 67.8
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 3.1e-189 665.6 549 66.8
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 1.3e-187 660.2 549 66.5
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 6.4e-187 657.9 577 63.1
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 8.4e-187 657.5 549 65.9
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 7.1e-186 654.4 558 64.7
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 1.0e-184 650.6 561 66.1
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 2.1e-182 642.9 563 62.9
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 5.3e-181 638.3 496 69.6
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 2.6e-180 636.0 496 69.4
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 7.6e-180 634.4 493 68.8
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 3.8e-179 632.1 547 63.6
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 1.9e-178 629.8 545 65.9
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 9.3e-178 627.5 509 68.4
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 1.7e-176 623.2 553 64.4
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 5.1e-176 621.7 574 61.3
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 8.7e-176 620.9 503 69.4
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 9.0e-173 610.9 524 64.7
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 2.0e-172 609.8 497 68.2
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 2.0e-172 609.8 494 68.2
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 1.3e-171 607.1 490 67.8
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 2.2e-171 606.3 537 63.3
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 4.9e-171 605.1 548 61.7
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 4.9e-171 605.1 531 63.3
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 6.4e-171 604.7 495 68.1
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 9.3e-170 600.9 533 64.0
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 9.3e-170 600.9 532 63.0
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 3.9e-168 595.5 504 64.7
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 1.9e-167 593.2 507 65.1
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 9.6e-167 590.9 493 66.3
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 2.1e-166 589.7 488 66.6
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 6.7e-160 568.2 487 64.5
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 2.1e-158 563.1 553 59.0
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 6.9e-157 558.1 551 59.0
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 2.0e-156 556.6 541 58.8
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 3.4e-156 555.8 530 60.0
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 1.0e-155 554.3 545 59.1
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 8.4e-155 551.2 571 56.9
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 8.4e-155 551.2 571 56.9
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 7.2e-154 548.1 562 57.8
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 4.6e-153 545.4 474 63.3
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 1.1e-151 540.8 548 57.7
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 1.1e-151 540.8 511 62.0
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 1.3e-150 537.3 503 60.2
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 3.7e-150 535.8 513 59.8
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 4.8e-150 535.4 471 63.1
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 1.2e-148 530.8 496 60.5
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 1.0e-147 527.7 615 52.7
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 3.8e-147 525.8 501 60.1
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 6.5e-147 525.0 545 57.4
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 1.9e-146 523.5 492 60.0
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 1.7e-142 510.4 482 59.8
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 4.1e-141 505.8 543 56.0
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 7.7e-140 501.5 491 58.2
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 2.1e-137 493.4 523 56.6
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.8e-136 490.3 556 53.2
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 5.3e-133 478.8 428 61.4
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 1.6e-132 477.2 496 56.5
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 1.0e-131 474.6 500 55.8
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 1.0e-128 464.5 506 54.9
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 1.8e-128 463.8 483 56.9
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 2.3e-128 463.4 494 55.1
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 4.8e-126 455.7 493 54.2
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 8.2e-126 454.9 386 67.6
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 3.5e-124 449.5 543 50.1
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 9.8e-119 431.4 420 59.0
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 1.4e-117 427.6 436 58.3
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 7.0e-117 425.2 499 50.7
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 2.7e-116 423.3 491 50.7
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 5.0e-115 419.1 473 50.3
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 1.1e-114 417.9 462 52.4
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 6.8e-112 408.7 465 52.7
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 7.5e-111 405.2 489 52.6
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 1.1e-109 401.4 496 50.4
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 7.0e-109 398.7 492 51.6
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 9.2e-101 371.7 348 60.1
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 1.0e-99 368.2 496 49.2
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 1.0e-96 358.2 509 46.8
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 6.8e-96 355.5 541 43.6
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 4.6e-92 342.8 527 45.2
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 2.8e-89 333.6 502 43.4
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 3.1e-88 330.1 565 38.9
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 2.9e-86 323.6 519 42.8
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 9.2e-85 318.5 597 38.2
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 4.6e-84 316.2 312 59.0
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 3.0e-83 313.5 332 58.1
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 1.4e-80 304.7 517 41.0
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.7e-75 287.7 296 57.1
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 6.9e-72 275.8 504 36.7
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.2e-71 275.0 224 66.1
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 2.8e-65 253.8 225 63.6
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 1.9e-61 241.1 521 35.5
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 1.9e-58 231.1 371 46.1
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 1.3e-46 191.8 581 29.8
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 1.9e-42 177.9 366 36.3
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 3.7e-41 173.7 524 29.8
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 6.7e-35 152.9 194 48.5
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 4.8e-33 146.7 88 79.5
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 9.7e-26 122.5 133 51.9
Peaxi162Scf00370g00114 Petunia axillaris HOM05D006568 ORTHO05D008342 1.1e-13 82.4 108 49.1
Oeu060513.1 Olea europaea HOM05D006568 ORTHO05D008342 2.0e-10 71.6 98 39.8
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 6.3e-09 66.6 290 28.3
Medtr8g014610 Medicago truncatula HOM05D006568 ORTHO05D258972 3.1e-08 64.3 69 56.5


User provided reference genes

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