Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 5.5e-156 554.3 285 100.0
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 8.2e-152 540.4 285 97.9
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 1.4e-146 523.1 285 93.3
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 7.0e-127 457.6 292 82.5
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 1.0e-109 400.6 277 74.4
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 4.3e-108 395.2 284 73.9
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 1.3e-88 330.5 277 62.5
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 2.3e-85 319.7 276 64.1
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 2.5e-84 316.2 284 59.9
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 3.3e-84 315.8 282 58.5
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 7.3e-84 314.7 286 62.2
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 1.6e-83 313.5 276 63.0
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 6.2e-83 311.6 284 58.5
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 1.1e-82 310.8 287 58.5
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 1.8e-82 310.1 272 61.4
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 4.0e-82 308.9 272 59.6
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 5.2e-82 308.5 278 60.4
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 8.9e-82 307.8 278 59.0
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 1.5e-81 307.0 280 57.5
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 5.8e-81 305.1 272 60.3
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 1.3e-80 303.9 278 59.4
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 1.3e-80 303.9 277 59.9
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 1.7e-80 303.5 285 57.5
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 1.1e-79 300.8 276 58.3
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 1.4e-79 300.4 277 57.0
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 1.4e-79 300.4 273 57.5
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 1.9e-79 300.1 271 57.9
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 5.4e-79 298.5 276 57.6
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 9.2e-79 297.7 276 57.2
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 1.6e-78 297.0 285 55.8
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 7.8e-78 294.7 289 53.6
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 1.0e-77 294.3 278 56.1
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 1.3e-77 293.9 275 57.8
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 1.7e-77 293.5 271 57.9
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 6.6e-77 291.6 284 54.9
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 8.7e-77 291.2 278 55.8
THA.LOC104827422 Tarenaya hassleriana HOM05D008006 ORTHO05D010181 3.3e-76 289.3 273 56.8
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 1.2e-75 287.3 288 54.9
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 1.6e-75 287.0 279 57.0
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 1.6e-75 287.0 280 57.1
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 8.1e-75 284.6 271 56.1
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 8.1e-75 284.6 267 56.2
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 8.1e-75 284.6 277 54.5
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 4.4e-73 278.9 273 55.3
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 5.8e-73 278.5 269 55.4
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 1.7e-72 276.9 265 55.5
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 1.4e-71 273.9 276 55.4
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 1.2e-70 270.8 271 53.9
EL10Ac6g14724 Beta vulgaris HOM05D008006 ORTHO05D010181 1.6e-70 270.4 284 56.0
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 1.7e-69 266.9 280 53.2
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 3.9e-69 265.8 278 52.2
HPP92_022771 Vanilla planifolia HOM05D008006 ORTHO05D010181 4.3e-68 262.3 270 53.7
Ah.07g202950 Amaranthus hybridus HOM05D008006 ORTHO05D010181 2.8e-67 259.6 283 54.4
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 2.8e-67 259.6 288 51.7
Zm00001eb102080 Zea mays HOM05D008006 ORTHO05D010181 2.6e-65 253.1 283 51.6
AUR62016258 Chenopodium quinoa HOM05D008006 ORTHO05D010181 1.1e-63 247.7 254 56.7
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 1.0e-61 241.1 291 51.9
SalBow5G3372 Salvia bowleyana HOM05D008006 ORTHO05D010181 3.9e-61 239.2 274 51.8
SEGI_07410 Sequoiadendron giganteum HOM05D008006 ORTHO05D010181 3.3e-60 236.1 274 50.0
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 9.6e-60 234.6 278 48.9
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 4.5e-57 225.7 218 57.3
FAN26G1902 Fragaria x ananassa HOM05D008006 ORTHO05D010181 4.9e-56 222.2 123 93.5
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 7.4e-52 208.4 201 56.2
Mapoly0054s0065 Marchantia polymorpha HOM05D008006 ORTHO05D010181 1.5e-49 200.7 278 45.3
HanXRQChr15g0486431 Helianthus annuus HOM05D008006 ORTHO05D010181 4.9e-48 195.7 159 57.2
AUR62003323 Chenopodium quinoa HOM05D002832 ORTHO05D007530 5.9e-41 172.2 134 61.2
Lalb_Chr11g0072821 Lupinus albus HOM05D008006 ORTHO05D010181 2.2e-40 170.2 117 70.1
SMO364G0826 Selaginella moellendorffii HOM05D008006 ORTHO05D010181 4.8e-35 152.5 186 49.5
FAN26G1226 Fragaria x ananassa HOM05D008006 ORTHO05D010181 5.7e-28 129.0 93 78.5
Solyc02g068350.1 Solanum lycopersicum HOM05D008006 ORTHO05D010181 4.8e-27 125.9 149 48.3
CBR_g4365 Chara braunii HOM05D008006 ORTHO05D010181 3.5e-25 119.8 311 30.9
AUR62043755 Chenopodium quinoa HOM05D008006 ORTHO05D010181 2.0e-20 104.0 80 63.8
Cre16.g675000 Chlamydomonas reinhardtii HOM05D008006 ORTHO05D010181 6.3e-19 99.0 300 32.0
Hma1.2p1_2924F.1_g330380 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 6.3e-11 72.4 57 56.1


User provided reference genes

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