Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g01080 Fragaria vesca HOM05D020741 ORTHO05D022616 4.9e-82 307.8 155 100.0
FAN28G1570 Fragaria x ananassa HOM05D020741 ORTHO05D022616 5.6e-78 294.3 152 97.4
FAN23G0237 Fragaria x ananassa HOM05D020741 ORTHO05D022616 3.6e-77 291.6 155 94.8
FAN19G1059 Fragaria x ananassa HOM05D020741 ORTHO05D022616 6.1e-77 290.8 152 96.1
FAN26G0305 Fragaria x ananassa HOM05D020741 ORTHO05D022616 2.4e-28 129.4 68 92.6
FAN26G0413 Fragaria x ananassa HOM05D020741 ORTHO05D022616 7.4e-22 107.8 61 90.2
Sabra10G0139300 Salix brachista HOM05D002309 ORTHO05D002869 5.5e-17 91.7 136 42.6
EL10Ac7g17028 Beta vulgaris HOM05D002309 ORTHO05D002869 6.7e-15 84.7 153 39.2
Lalb_Chr01g0023521 Lupinus albus HOM05D002309 ORTHO05D002869 1.5e-14 83.6 110 45.5
ECA247G3103 Erigeron canadensis HOM05D002309 ORTHO05D002869 4.3e-14 82.0 140 40.0
SalBow5G5020 Salvia bowleyana HOM05D002309 ORTHO05D002869 5.7e-14 81.6 160 35.6
AUR62026361 Chenopodium quinoa HOM05D002309 ORTHO05D002869 7.4e-14 81.3 117 43.6
THA.LOC104824344 Tarenaya hassleriana HOM05D002309 ORTHO05D002869 9.7e-14 80.9 125 42.4
TWI73G0725 Tripterygium wilfordii HOM05D002309 ORTHO05D002869 1.3e-13 80.5 136 39.7
PRCOL_00002992 Prasinoderma coloniale HOM05D002309 ORTHO05D002869 1.6e-13 80.1 156 37.2
THA.LOC104810133 Tarenaya hassleriana HOM05D002309 ORTHO05D002869 1.6e-13 80.1 118 44.1
VMungo1080G1813 Vigna mungo HOM05D002309 ORTHO05D002869 2.8e-13 79.3 136 38.2
HanXRQChr06g0174931 Helianthus annuus HOM05D002309 ORTHO05D002869 3.7e-13 79.0 136 39.7
Phvul.001G247900 Phaseolus vulgaris HOM05D002309 ORTHO05D002869 3.7e-13 79.0 136 37.5
Pp3c17_810 Physcomitrium patens HOM05D002309 ORTHO05D002869 3.7e-13 79.0 139 40.3
Sp4g22750 Schrenkiella parvula HOM05D002309 ORTHO05D002869 3.7e-13 79.0 136 41.2
TAR633G1258 Trochodendron aralioides HOM05D002309 ORTHO05D002869 3.7e-13 79.0 136 39.7
Sc07g0005750 Simmondsia chinensis HOM05D002309 ORTHO05D002869 2.4e-12 76.3 134 38.1
MSTRG.184 Avicennia marina HOM05D002309 ORTHO05D002869 4.1e-12 75.5 124 41.1
Hma1.2p1_2300F.1_g319230 Hydrangea macrophylla HOM05D002309 ORTHO05D002869 6.9e-12 74.7 136 39.7
Aa31LG10G11100 Aethionema arabicum HOM05D002309 ORTHO05D002869 9.0e-12 74.3 118 43.2
TWI36G1150 Tripterygium wilfordii HOM05D002309 ORTHO05D002869 1.5e-11 73.6 136 39.7
Potri.016G129900 Populus trichocarpa HOM05D002309 ORTHO05D002869 1.0e-10 70.9 136 36.0
Lj8C58T2 Lonicera japonica HOM05D002309 ORTHO05D002869 1.3e-10 70.5 132 37.9
Dinv10561 Davidia involucrata HOM05D002309 ORTHO05D002869 3.8e-10 68.9 96 42.7
AUR62006320 Chenopodium quinoa HOM05D002309 ORTHO05D002869 5.0e-10 68.6 117 40.2
Haze_23608 Corylus avellana HOM05D002309 ORTHO05D002869 6.5e-10 68.2 76 47.4
Ca_15177_v3 Cicer arietinum L. HOM05D002309 ORTHO05D002869 1.1e-09 67.4 104 37.5
AL4G38240 Arabidopsis lyrata HOM05D002309 ORTHO05D002869 1.9e-09 66.6 125 39.2
ECA232G0577 Erigeron canadensis HOM05D002309 ORTHO05D002869 1.9e-09 66.6 132 34.8
Lj2A64T50 Lonicera japonica HOM05D002309 ORTHO05D002869 2.5e-09 66.2 136 36.0
Rhsim09G0182300 Rhododendron simsii HOM05D002309 ORTHO05D340102 3.2e-09 65.9 145 36.6
Oeu038710.1 Olea europaea HOM05D002309 ORTHO05D002869 5.5e-09 65.1 136 34.6
Potri.010G181900 Populus trichocarpa HOM05D002309 ORTHO05D002869 7.2e-09 64.7 132 34.1
TPR.G18664 Trifolium pratense HOM05D002309 ORTHO05D002869 7.2e-09 64.7 111 38.7
ECA247G1519 Erigeron canadensis HOM05D002309 ORTHO05D002869 9.4e-09 64.3 114 39.5
Migut.F01268 Erythranthe guttata HOM05D002309 ORTHO05D002869 9.4e-09 64.3 136 35.3
Sed0009542 Sechium edule HOM05D002309 ORTHO05D002869 9.4e-09 64.3 161 33.5
CiPaw.02G197200 Carya illinoinensis HOM05D002309 ORTHO05D002869 1.2e-08 63.9 95 41.1
Lj4g0005244 Lotus japonicus HOM05D002309 ORTHO05D002869 2.1e-08 63.2 110 38.2
Rhsim02G0191600 Rhododendron simsii HOM05D002309 ORTHO05D002869 2.1e-08 63.2 105 39.0
Hund19830 Selenicereus undatus HOM05D002309 ORTHO05D002869 2.7e-08 62.8 78 46.2
arahy.Tifrunner.gnm1.ann1.8G1WHE Arachis hypogaea HOM05D002309 ORTHO05D002869 6.1e-08 61.6 110 38.2
MD01G1161100 Malus domestica HOM05D002309 ORTHO05D002869 6.1e-08 61.6 127 37.0
Cfa017089 Carpinus fangiana HOM05D002309 ORTHO05D002869 1.0e-07 60.8 153 31.4
TAR623G0851 Trochodendron aralioides HOM05D002309 ORTHO05D002869 1.8e-07 60.1 162 33.3
CAN.G1529.5 Capsicum annuum HOM05D002309 ORTHO05D002869 2.3e-07 59.7 147 31.3
Sabra16G0128900 Salix brachista HOM05D002309 ORTHO05D002869 2.3e-07 59.7 136 34.6
Cc02_g05770 Coffea canephora HOM05D002309 ORTHO05D002869 3.0e-07 59.3 121 35.5
Haze_21111 Corylus avellana HOM05D002309 ORTHO05D002869 3.0e-07 59.3 131 33.6
Atru.chr12.126 Acer truncatum HOM05D002309 ORTHO05D002869 3.9e-07 58.9 133 33.1
Ca_06013_v3 Cicer arietinum L. HOM05D002309 ORTHO05D002869 3.9e-07 58.9 130 33.1
Phvul.008G089600 Phaseolus vulgaris HOM05D002309 ORTHO05D002869 5.1e-07 58.5 110 36.4
vmacro09986 Vaccinium macrocarpon HOM05D002309 ORTHO05D002869 6.7e-07 58.2 65 49.2
Ciclev10032291m.g Citrus clementina HOM05D002309 ORTHO05D002869 8.8e-07 57.8 132 33.3
Lsat_1_v5_gn_9_27941 Lactuca sativa HOM05D002309 ORTHO05D002869 8.8e-07 57.8 140 32.9
HanXRQChr10g0295731 Helianthus annuus HOM05D002309 ORTHO05D002869 2.5e-06 56.2 140 33.6
Potri.008G075400 Populus trichocarpa HOM05D002309 ORTHO05D002869 2.5e-06 56.2 88 37.5
Ca_28623_v3 Cicer arietinum L. HOM05D002309 ORTHO05D002869 4.3e-06 55.5 136 32.4
Lalb_Chr11g0075161 Lupinus albus HOM05D002309 ORTHO05D002869 5.7e-06 55.1 129 33.3
Glyma.18G022500 Glycine max HOM05D002309 ORTHO05D002869 7.4e-06 54.7 95 33.7
AL5G37510 Arabidopsis lyrata HOM05D002309 ORTHO05D002869 9.7e-06 54.3 118 38.1
AT3G56190 Arabidopsis thaliana HOM05D002309 ORTHO05D002869 9.7e-06 54.3 118 38.1
Carub.0005s2297 Capsella rubella HOM05D002309 ORTHO05D002869 9.7e-06 54.3 118 38.1
CARHR166340 Cardamine hirsuta HOM05D002309 ORTHO05D002869 9.7e-06 54.3 120 36.7


User provided reference genes

Program Settings