Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FvH4_1g00961 Fragaria vesca HOM05D000002 ORTHO05D000001 1.4e-188 662.9 363 100.0
FvH4_3g17262 Fragaria vesca HOM05D000002 ORTHO05D000001 4.6e-91 339.0 364 59.9
FvH4_6g20601 Fragaria vesca HOM05D000002 ORTHO05D000001 4.9e-85 318.9 194 85.6
RcHm_v2.0_Chr2g0117741 Rosa chinensis HOM05D000002 ORTHO05D000001 1.5e-54 217.6 200 62.5
FvH4_2g23291 Fragaria vesca HOM05D000002 ORTHO05D000001 6.5e-45 185.7 198 58.6
Sabra18G0120700 Salix brachista HOM05D000002 ORTHO05D000001 2.9e-37 160.2 191 50.3
MD14G1189500 Malus domestica HOM05D000002 ORTHO05D000001 5.5e-36 156.0 228 43.4
Hma1.2p1_0840F.1_g226720 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.2e-35 154.8 202 47.0
Hma1.2p1_3787F.1_g337595 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.2e-35 154.8 202 47.0
MD04G1151700 Malus domestica HOM05D000002 ORTHO05D000001 2.1e-35 154.1 196 46.9
Prupe.8G084200 Prunus persica HOM05D000002 ORTHO05D000001 4.0e-34 149.8 220 45.0
FvH4_3g39581 Fragaria vesca HOM05D000002 ORTHO05D000001 5.2e-34 149.4 200 45.5
MD14G1225200 Malus domestica HOM05D000002 ORTHO05D000001 5.2e-34 149.4 205 45.9
Sabra15G0028100 Salix brachista HOM05D000002 ORTHO05D000001 5.2e-34 149.4 191 48.7
MD13G1050200 Malus domestica HOM05D000002 ORTHO05D000001 6.8e-34 149.1 227 40.5
MD02G1010600 Malus domestica HOM05D000002 ORTHO05D000001 1.5e-33 147.9 199 44.2
MD12G1185900 Malus domestica HOM05D000002 ORTHO05D000001 5.7e-33 146.0 202 45.0
MD13G1099200 Malus domestica HOM05D000002 ORTHO05D000001 4.8e-32 142.9 192 42.2
Prupe.2G074700 Prunus persica HOM05D000002 ORTHO05D000001 1.0e-29 135.2 188 47.3
MD17G1248200 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-29 134.4 199 38.7
MD16G1247000 Malus domestica HOM05D000002 ORTHO05D003361 2.9e-29 133.7 226 40.3
MD00G1024600 Malus domestica HOM05D000002 ORTHO05D000001 5.5e-28 129.4 215 40.9
MD05G1320000 Malus domestica HOM05D000002 ORTHO05D000001 2.1e-27 127.5 198 39.4
MD12G1175300 Malus domestica HOM05D000002 ORTHO05D000001 8.9e-26 122.1 215 40.0
FvH4_4g33449 Fragaria vesca HOM05D000002 ORTHO05D000001 7.5e-25 119.0 153 50.3
Hma1.2p1_0903F.1_g234920 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.5e-22 110.2 104 59.6
Hma1.2p1_1446F.1_g283970 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.5e-22 109.8 189 38.6
RcHm_v2.0_Chr6g0304931 Rosa chinensis HOM05D000002 ORTHO05D000001 5.9e-22 109.4 116 53.4
Ciclev10013318m.g Citrus clementina HOM05D000002 ORTHO05D000001 1.3e-21 108.2 102 59.8
Hma1.2p1_0158F.1_g069590 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-21 108.2 153 48.4
Hma1.2p1_2469F.1_g322690 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-21 108.2 153 48.4
Hma1.2p1_1768F.1_g301510 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.3e-21 107.5 105 57.1
Hma1.2p1_3787F.1_g337600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.3e-21 107.5 105 57.1
Hma1.2p1_0445F.1_g154480 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.6e-21 105.5 208 40.9
Hma1.2p1_1359F.1_g278060 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-20 105.1 158 43.0
MD03G1056000 Malus domestica HOM05D000002 ORTHO05D000001 3.3e-20 103.6 173 41.6
Hma1.2p1_0951F.1_g240790 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.0e-19 99.0 103 53.4
MD15G1119400 Malus domestica HOM05D000056 ORTHO05D000001 1.0e-18 98.6 105 46.7
Prupe.3G026300 Prunus persica HOM05D000002 ORTHO05D000001 1.8e-18 97.8 72 66.7
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.8e-18 97.8 154 37.7
Hma1.2p1_0134F.1_g061510 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.1e-18 97.1 100 55.0
MD12G1231800 Malus domestica HOM05D000002 ORTHO05D000001 5.8e-17 92.8 232 34.5
MD12G1254500 Malus domestica HOM05D002861 ORTHO05D003104 1.7e-16 91.3 72 56.9
Hma1.2p1_0299F.1_g117780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.4e-16 89.4 149 43.0
Hma1.2p1_0090F.1_g045570 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-15 88.6 68 64.7
Hma1.2p1_0240F.1_g100220 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-15 88.6 193 34.7
Atru.chr9.1622 Acer truncatum HOM05D000002 ORTHO05D000001 3.2e-15 87.0 93 50.5
Atru.chr9.1623 Acer truncatum HOM05D000002 ORTHO05D000001 3.2e-15 87.0 93 50.5
Atru.chr9.1635 Acer truncatum HOM05D000002 ORTHO05D000001 3.2e-15 87.0 93 50.5
RcHm_v2.0_Chr2g0129181 Rosa chinensis HOM05D000002 ORTHO05D000001 3.2e-15 87.0 252 29.4
RcHm_v2.0_Chr3g0465981 Rosa chinensis HOM05D000002 ORTHO05D000001 4.1e-15 86.7 201 32.8
Prupe.8G080900 Prunus persica HOM05D000002 ORTHO05D000001 5.4e-15 86.3 68 61.8
FvH4_2g20161 Fragaria vesca HOM05D000002 ORTHO05D000001 6.0e-14 82.8 96 57.3
MD12G1254700 Malus domestica HOM05D002861 ORTHO05D003104 1.3e-13 81.6 179 31.8
Aqoxy5G02395 Aquilegia oxysepala HOM05D000002 ORTHO05D000001 2.3e-13 80.9 211 30.3
Lj4P665T30 Lonicera japonica HOM05D000002 ORTHO05D000001 6.6e-13 79.3 219 31.5
Hma1.2p1_1036F.1_g250540 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-12 78.6 144 40.3
Sabra14G0114400 Salix brachista HOM05D000002 ORTHO05D000001 1.1e-12 78.6 202 28.7
Sabra01G0007200 Salix brachista HOM05D003064 ORTHO05D000001 1.5e-12 78.2 200 29.0
CANSAT54G2325 Cannabis sativa HOM05D000002 ORTHO05D000001 1.9e-12 77.8 110 40.9
Hma1.2p1_1458F.1_g284730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-12 77.8 50 76.0
MD12G1020900 Malus domestica HOM05D000103 ORTHO05D000001 3.3e-12 77.0 227 28.6
Atru.chr11.281 Acer truncatum HOM05D000002 ORTHO05D000001 4.3e-12 76.6 126 40.5
PSO170G3282 Papaver somniferum HOM05D000002 ORTHO05D000001 9.5e-12 75.5 184 31.5
QL08p061042 Quercus lobata HOM05D000002 ORTHO05D000001 1.2e-11 75.1 189 32.8
RcHm_v2.0_Chr7g0190501 Rosa chinensis HOM05D000002 ORTHO05D000001 1.6e-11 74.7 211 29.9
CANSAT21G1279 Cannabis sativa HOM05D000002 ORTHO05D000001 2.1e-11 74.3 85 44.7
TAR099G0005 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.8e-11 73.9 172 28.5
RcHm_v2.0_Chr2g0101531 Rosa chinensis HOM05D000002 ORTHO05D000001 3.6e-11 73.6 52 69.2
Sabra18G0040600 Salix brachista HOM05D000002 ORTHO05D010776 3.6e-11 73.6 175 30.3
MELO3C013392.2 Cucumis melo HOM05D000002 ORTHO05D000001 4.7e-11 73.2 200 32.0
Hma1.2p1_0110F.1_g052720 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.2e-11 72.8 53 66.0
Hma1.2p1_2381F.1_g321020 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.2e-11 72.8 67 56.7
Lj9C524G4 Lonicera japonica HOM05D000002 ORTHO05D000001 1.1e-10 72.0 68 50.0
Atru.chr6.1164 Acer truncatum HOM05D000002 ORTHO05D000001 1.4e-10 71.6 187 30.5
MD17G1115400 Malus domestica HOM05D000002 ORTHO05D000001 1.8e-10 71.2 213 29.1
MD00G1084700 Malus domestica HOM05D000002 ORTHO05D000001 3.1e-10 70.5 173 32.4
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.1e-10 70.5 170 30.0
CsaV3_7G000640 Cucumis sativus L. HOM05D000002 ORTHO05D000001 4.0e-10 70.1 193 30.1
Sabra16G0101900 Salix brachista HOM05D000002 ORTHO05D010776 4.0e-10 70.1 171 30.4
PSO832G1651 Papaver somniferum HOM05D000002 ORTHO05D000001 6.8e-10 69.3 178 34.3
Prupe.4G238700 Prunus persica HOM05D000002 ORTHO05D000001 8.9e-10 68.9 54 61.1
Aa31LG1G6100 Aethionema arabicum HOM05D000002 ORTHO05D000001 1.2e-09 68.6 191 31.4
GSVIVG01036343001 Vitis vinifera HOM05D000067 ORTHO05D000097 2.6e-09 67.4 206 25.7
Sed0000135 Sechium edule HOM05D000002 ORTHO05D000001 3.4e-09 67.0 177 27.1
TAR650G0001 Trochodendron aralioides HOM05D000067 ORTHO05D000001 3.4e-09 67.0 276 29.7
RcHm_v2.0_Chr3g0496771 Rosa chinensis HOM05D000002 ORTHO05D000001 7.5e-09 65.9 169 31.4
Sabra07G0042600 Salix brachista HOM05D000002 ORTHO05D000001 7.5e-09 65.9 201 30.3
Ah.11g039570 Amaranthus hybridus HOM05D000002 ORTHO05D000001 9.8e-09 65.5 174 28.7
CSS0034832 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.8e-09 65.5 196 30.1
COL.COLO4_37640 Corchorus olitorius HOM05D000002 ORTHO05D000001 9.8e-09 65.5 167 27.5
Sabra16G0137600 Salix brachista HOM05D000136 ORTHO05D000080 9.8e-09 65.5 84 44.0
CSS0004505 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-08 65.1 210 30.5
CSS0034935 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-08 64.7 169 29.6
MD11G1146000 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-08 64.7 217 28.1
Solyc10g038180.3 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.7e-08 64.7 198 25.3
Sabra06G0056900 Salix brachista HOM05D000002 ORTHO05D000001 2.2e-08 64.3 198 25.8
Solyc05g050070.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 3.7e-08 63.5 193 27.5
CSS0040078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.9e-08 63.2 205 28.8
VMungo1309G3040 Vigna mungo HOM05D000002 ORTHO05D000001 4.9e-08 63.2 168 31.0
ECA240G2866 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.3e-08 62.4 103 36.9
CSS0006924 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-07 62.0 223 28.7
CSS0020834 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-07 62.0 192 27.6
Sopen05g011750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-07 62.0 180 28.3
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-07 62.0 183 27.9
CANSAT64G1606 Cannabis sativa HOM05D000002 ORTHO05D000001 1.4e-07 61.6 165 29.1
CANSAT25G3406 Cannabis sativa HOM05D024232 ORTHO05D000001 1.9e-07 61.2 81 39.5
ECA248G2841 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-07 61.2 98 36.7
Sabra11G0117700 Salix brachista HOM05D020515 ORTHO05D000001 1.9e-07 61.2 144 32.6
Sopen11g003490 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-07 61.2 179 27.9
CSS0004364 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-07 60.8 206 28.2
Hma1.2p1_1397F.1_g280780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.4e-07 60.8 205 27.3
Rhsim04G0108900 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.4e-07 60.8 202 29.7
HanXRQChr03g0078371 Helianthus annuus HOM05D000002 ORTHO05D000001 3.2e-07 60.5 201 25.4
PSO017G2967 Papaver somniferum HOM05D000002 ORTHO05D000001 3.2e-07 60.5 101 36.6
Solyc05g015654.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 3.2e-07 60.5 204 27.9
TAR042G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.2e-07 60.5 187 25.7
PSO170G3169 Papaver somniferum HOM05D000002 ORTHO05D000001 5.4e-07 59.7 78 39.7
CSS0041353 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.0e-07 59.3 176 29.0
Hma1.2p1_0682F.1_g202600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.0e-07 59.3 174 25.9
PSO832G3798 Papaver somniferum HOM05D000002 ORTHO05D000001 7.0e-07 59.3 177 29.9
Psat6g102280 Pisum sativum HOM05D000002 ORTHO05D000001 7.0e-07 59.3 170 28.2
TAR218G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 7.0e-07 59.3 60 46.7
Aa31LG3G5060 Aethionema arabicum HOM05D000002 ORTHO05D000001 9.2e-07 58.9 196 26.5
Psat2g152960 Pisum sativum HOM05D000002 ORTHO05D000001 9.2e-07 58.9 192 26.0
CSS0001647 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D043317 1.2e-06 58.5 204 28.4
CiPaw.14G093700 Carya illinoinensis HOM05D000002 ORTHO05D000001 1.2e-06 58.5 70 40.0
Hma1.2p1_0939F.1_g239370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.2e-06 58.5 213 24.9
PSO478G4367 Papaver somniferum HOM05D000002 ORTHO05D000001 1.2e-06 58.5 77 36.4
Rhsim05G0196600 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.2e-06 58.5 205 28.8
Sabra18G0022200 Salix brachista HOM05D000002 ORTHO05D000001 1.2e-06 58.5 202 27.7
COL.COLO4_24669 Corchorus olitorius HOM05D014020 ORTHO05D000001 1.6e-06 58.2 155 31.0
ECA240G0216 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.6e-06 58.2 116 31.0
HanXRQChr13g0407151 Helianthus annuus HOM05D000002 ORTHO05D000001 1.6e-06 58.2 196 27.0
PSO170G6306 Papaver somniferum HOM05D000002 ORTHO05D000001 1.6e-06 58.2 153 32.0
Rhsim05G0062600 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.6e-06 58.2 202 29.7
PSO761G0433 Papaver somniferum HOM05D000002 ORTHO05D000001 2.1e-06 57.8 94 38.3
Sabra13G0015400 Salix brachista HOM05D004841 ORTHO05D005874 2.1e-06 57.8 361 25.2
CSS0011046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-06 57.4 173 30.1
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.7e-06 57.4 169 24.9
Nn8g39601 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.7e-06 57.4 149 30.9
Hma1.2p1_0233F.1_g098110 Hydrangea macrophylla HOM05D014274 ORTHO05D024986 3.5e-06 57.0 125 33.6
PSO063G2914 Papaver somniferum HOM05D000002 ORTHO05D000001 3.5e-06 57.0 191 28.8
PSO384G3528 Papaver somniferum HOM05D000002 ORTHO05D000001 3.5e-06 57.0 183 27.9
Hma1.2p1_0018F.1_g012350 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.6e-06 56.6 81 35.8
TAR386G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.6e-06 56.6 202 26.7
COL.COLO4_22605 Corchorus olitorius HOM05D014020 ORTHO05D000001 6.0e-06 56.2 99 34.3
ECA236G4365 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.0e-06 56.2 177 27.1
HanXRQChr17g0541481 Helianthus annuus HOM05D000002 ORTHO05D000001 6.0e-06 56.2 209 27.8
MD09G1100700 Malus domestica HOM05D000002 ORTHO05D000001 6.0e-06 56.2 208 26.4
QL08p052300 Quercus lobata HOM05D000002 ORTHO05D000001 6.0e-06 56.2 101 33.7
Sopen01g025080 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-06 56.2 204 27.5
Sopen02g037750 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-06 56.2 204 27.5
Sopen07g006410 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-06 56.2 204 27.5
Sopen07g029680 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-06 56.2 204 27.5
Sopen07g031580 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-06 56.2 204 27.5
Sopen08g004430 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-06 56.2 204 27.5
Sopen10g024730 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-06 56.2 204 27.5
Sopen12g022570 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-06 56.2 204 27.5
CSS0014384 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.8e-06 55.8 178 25.8
CSS0019354 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.8e-06 55.8 203 27.6
COL.COLO4_08663 Corchorus olitorius HOM05D014020 ORTHO05D000001 7.8e-06 55.8 155 29.7
Hma1.2p1_0098F.1_g048290 Hydrangea macrophylla HOM05D003044 ORTHO05D001869 7.8e-06 55.8 51 51.0
Hma1.2p1_1940F.1_g308370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.8e-06 55.8 120 30.0
Nn1g06783 Nelumbo nucifera HOM05D023713 ORTHO05D000001 7.8e-06 55.8 71 40.8
PSO066G0001 Papaver somniferum HOM05D000002 ORTHO05D000001 7.8e-06 55.8 117 34.2
Psat0s127g0080 Pisum sativum HOM05D008404 ORTHO05D000001 7.8e-06 55.8 167 28.7
Prupe.8G185100 Prunus persica HOM05D000002 ORTHO05D000001 7.8e-06 55.8 72 43.1


User provided reference genes

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