Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G3008 Fragaria x ananassa HOM05D014719 ORTHO05D003355 2.1e-206 722.2 396 100.0
FAN26G0704 Fragaria x ananassa HOM05D014719 ORTHO05D003355 1.6e-166 589.7 419 84.5
FvH4_1g28370 Fragaria vesca HOM05D014719 ORTHO05D003355 2.2e-147 526.2 364 87.1
FAN23G2175 Fragaria x ananassa HOM05D014719 ORTHO05D003355 3.3e-143 512.3 409 78.0
FAN19G1520 Fragaria x ananassa HOM05D014719 ORTHO05D003355 3.8e-131 472.2 364 81.0
RcHm_v2.0_Chr3g0496661 Rosa chinensis HOM05D014719 ORTHO05D003355 3.6e-105 386.0 374 59.9
Prupe.8G267500 Prunus persica HOM05D014719 ORTHO05D003355 1.1e-40 171.8 375 39.2
QL08p003943 Quercus lobata HOM05D014719 ORTHO05D003355 7.9e-20 102.4 377 30.0
Hma1.2p1_2829F.1_g329210 Hydrangea macrophylla HOM05D005863 ORTHO05D003355 1.3e-17 95.1 360 30.3
TAR629G0397 Trochodendron aralioides HOM05D005863 ORTHO05D003355 2.8e-17 94.0 387 27.9
Rhsim04G0012300 Rhododendron simsii HOM05D005863 ORTHO05D003355 4.1e-16 90.1 372 29.0
GSVIVG01014696001 Vitis vinifera HOM05D005863 ORTHO05D003355 5.3e-16 89.7 387 28.7
CiPaw.12G138700 Carya illinoinensis HOM05D014719 ORTHO05D003355 1.0e-14 85.5 384 29.4
Eucgr.F03684 Eucalyptus grandis HOM05D005863 ORTHO05D003355 2.7e-12 77.4 368 25.0
Actinidia37152 Actinidia chinensis HOM05D005863 ORTHO05D003355 7.9e-12 75.9 368 27.4
Dinv10342 Davidia involucrata HOM05D005863 ORTHO05D003355 2.0e-10 71.2 371 27.5
CSS0034444 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D001683 2.2e-09 67.8 99 36.4
Medtr2g036070 Medicago truncatula HOM05D005863 ORTHO05D003355 6.3e-09 66.2 116 35.3
Psat1g149600 Pisum sativum HOM05D005863 ORTHO05D003355 6.3e-09 66.2 137 34.3
Nn1g07525 Nelumbo nucifera HOM05D005863 ORTHO05D003355 1.1e-08 65.5 375 24.3
Potri.007G102500 Populus trichocarpa HOM05D005863 ORTHO05D003355 1.1e-08 65.5 100 39.0
CsaV3_7G011440 Cucumis sativus L. HOM05D031146 ORTHO05D003355 1.8e-08 64.7 361 27.1
Lj6g0020676 Lotus japonicus HOM05D005863 ORTHO05D003355 1.8e-08 64.7 106 37.7
arahy.Tifrunner.gnm1.ann1.9BU9L2 Arachis hypogaea HOM05D005863 ORTHO05D003355 4.1e-08 63.5 89 38.2
TPR.G1700 Trifolium pratense HOM05D005863 ORTHO05D003355 5.3e-08 63.2 404 24.5
Sp1g41465 Schrenkiella parvula HOM05D012516 ORTHO05D003355 7.0e-08 62.8 93 36.6
PSO384G3490 Papaver somniferum HOM05D005863 ORTHO05D003355 1.2e-07 62.0 71 42.3
arahy.Tifrunner.gnm1.ann1.11ED70 Arachis hypogaea HOM05D005863 ORTHO05D003355 2.0e-07 61.2 69 43.5
Lalb_Chr18g0052131 Lupinus albus HOM05D005863 ORTHO05D003355 2.0e-07 61.2 60 51.7
PSO339G2613 Papaver somniferum HOM05D005863 ORTHO05D003355 2.0e-07 61.2 66 45.5
Sed0025324 Sechium edule HOM05D031146 ORTHO05D003355 2.0e-07 61.2 363 25.9
CANSAT78G1634 Cannabis sativa HOM05D005863 ORTHO05D003355 5.9e-07 59.7 63 46.0
ClCG09G021400 Citrullus lanatus HOM05D031146 ORTHO05D003355 5.9e-07 59.7 363 26.2
Cpa.g.sc12.119 Carica papaya HOM05D005863 ORTHO05D003355 1.0e-06 58.9 91 37.4
Lsat_1_v5_gn_7_114301 Lactuca sativa HOM05D005863 ORTHO05D003355 2.2e-06 57.8 81 35.8
COL.COLO4_23547 Corchorus olitorius HOM05D005863 ORTHO05D003355 2.9e-06 57.4 65 40.0
AL1G63990 Arabidopsis lyrata HOM05D012516 ORTHO05D003355 3.8e-06 57.0 93 36.6
PGR031G0790 Punica granatum HOM05D005863 ORTHO05D003355 3.8e-06 57.0 93 40.9
MELO3C024948.2 Cucumis melo HOM05D031146 ORTHO05D003355 5.0e-06 56.6 210 30.0
TPR.G14234 Trifolium pratense HOM05D013281 ORTHO05D003355 5.0e-06 56.6 74 37.8
BcaB02g10795 Brassica carinata HOM05D012516 ORTHO05D003355 6.5e-06 56.2 86 34.9
Haze_09834 Corylus avellana HOM05D014719 ORTHO05D003355 6.5e-06 56.2 158 31.6
Thhalv10011171m.g Eutrema salsugineum HOM05D000747 ORTHO05D001683 6.5e-06 56.2 58 43.1
Glyma.09G051600 Glycine max HOM05D005863 ORTHO05D003355 6.5e-06 56.2 60 45.0
vmacro01106 Vaccinium macrocarpon HOM05D005863 ORTHO05D003355 8.5e-06 55.8 60 46.7


User provided reference genes

Program Settings