Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G2984 Fragaria x ananassa HOM05D006730 ORTHO05D008189 1.4e-155 553.1 320 100.0
FAN26G1825 Fragaria x ananassa HOM05D006730 ORTHO05D008189 8.1e-140 500.7 300 90.0
FAN19G2476 Fragaria x ananassa HOM05D006730 ORTHO05D008189 4.7e-132 474.9 304 86.5
FvH4_1g27220 Fragaria vesca HOM05D006730 ORTHO05D008189 1.5e-130 469.9 300 86.3
FAN23G1889 Fragaria x ananassa HOM05D006730 ORTHO05D008189 2.1e-103 379.8 292 74.7
Prupe.8G045700 Prunus persica HOM05D006730 ORTHO05D008189 1.0e-73 281.2 305 52.8
RcHm_v2.0_Chr3g0487611 Rosa chinensis HOM05D006730 ORTHO05D008189 2.8e-68 263.1 312 53.5
MD04G1046800 Malus domestica HOM05D006730 ORTHO05D008189 2.5e-64 250.0 305 51.5
TAR633G0487 Trochodendron aralioides HOM05D006730 ORTHO05D008189 1.8e-43 180.6 307 38.8
QL10p052118 Quercus lobata HOM05D006730 ORTHO05D008189 5.9e-42 175.6 373 36.7
TAR633G1963 Trochodendron aralioides HOM05D006730 ORTHO05D008189 1.7e-41 174.1 313 39.0
Cfa015217 Carpinus fangiana HOM05D006730 ORTHO05D008189 1.5e-40 171.0 366 35.2
Potri.017G018300 Populus trichocarpa HOM05D006730 ORTHO05D008189 7.3e-40 168.7 317 34.7
Dinv05091 Davidia involucrata HOM05D006730 ORTHO05D008189 2.8e-39 166.8 317 37.9
Nn1g09713 Nelumbo nucifera HOM05D006730 ORTHO05D008189 3.6e-39 166.4 318 34.3
Duzib151G0982 Durio zibethinus HOM05D006730 ORTHO05D008189 4.0e-38 162.9 307 35.5
Sabra06G0076300 Salix brachista HOM05D006730 ORTHO05D008189 5.2e-38 162.5 319 33.5
Manes.04G048400 Manihot esculenta HOM05D006730 ORTHO05D008189 9.8e-37 158.3 338 37.0
Sabra17G0012500 Salix brachista HOM05D006730 ORTHO05D008189 9.8e-37 158.3 320 33.4
Ciclev10019155m.g Citrus clementina HOM05D006730 ORTHO05D008189 1.2e-34 151.4 336 36.0
Thecc.04G171700 Theobroma cacao HOM05D006730 ORTHO05D008189 1.2e-34 151.4 308 34.4
PGR102G2296 Punica granatum HOM05D006730 ORTHO05D008189 3.5e-34 149.8 334 32.3
Haze_01419 Corylus avellana HOM05D006730 ORTHO05D008189 7.8e-34 148.7 343 36.2
Lj3g0015132 Lotus japonicus HOM05D006730 ORTHO05D008189 1.7e-33 147.5 308 33.4
Actinidia27097 Actinidia chinensis HOM05D006730 ORTHO05D008189 2.3e-33 147.1 365 32.6
Gohir.D02G011000 Gossypium hirsutum HOM05D006730 ORTHO05D008189 2.3e-33 147.1 316 38.0
Glyma.12G050000 Glycine max HOM05D006730 ORTHO05D008189 6.6e-33 145.6 345 32.8
Gorai.005G013400 Gossypium raimondii HOM05D006730 ORTHO05D008189 8.6e-33 145.2 308 39.0
Medtr4g068005 Medicago truncatula HOM05D006730 ORTHO05D008189 8.6e-33 145.2 315 34.6
GSVIVG01038091001 Vitis vinifera HOM05D006730 ORTHO05D008189 8.6e-33 145.2 368 34.8
CsaV3_7G002050 Cucumis sativus L. HOM05D006730 ORTHO05D008189 1.1e-32 144.8 334 31.7
vmacro00655 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 5.6e-32 142.5 359 29.0
BcaB02g08030 Brassica carinata HOM05D006730 ORTHO05D008189 7.3e-32 142.1 309 32.4
MELO3C015702.2 Cucumis melo HOM05D006730 ORTHO05D008189 9.5e-32 141.7 335 32.2
BraA05t20528Z Brassica rapa HOM05D006730 ORTHO05D008189 1.6e-31 141.0 321 32.7
Aa31LG1G25250 Aethionema arabicum HOM05D006730 ORTHO05D008189 2.1e-31 140.6 327 33.0
CANSAT56G2182 Cannabis sativa HOM05D006730 ORTHO05D008189 2.1e-31 140.6 314 33.8
A05p16170 Brassica napus HOM05D006730 ORTHO05D008189 2.8e-31 140.2 319 32.3
Ca_07546_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 2.8e-31 140.2 326 35.6
AUR62028127 Chenopodium quinoa HOM05D006730 ORTHO05D008189 3.6e-31 139.8 323 30.0
Ca_03751_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 3.6e-31 139.8 341 35.8
Cpa.g.sc9.329 Carica papaya HOM05D006730 ORTHO05D008189 4.7e-31 139.4 357 30.3
Carub.0007s3500 Capsella rubella HOM05D006730 ORTHO05D008189 8.1e-31 138.7 362 28.5
AL7G49300 Arabidopsis lyrata HOM05D006730 ORTHO05D008189 1.4e-30 137.9 344 32.0
BcaC08g44345 Brassica carinata HOM05D006730 ORTHO05D008189 4.0e-30 136.3 312 30.4
MBI11_g10487_MAGBIO Magnolia biondii HOM05D006730 ORTHO05D008189 4.0e-30 136.3 313 31.0
vmacro21172 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 4.0e-30 136.3 359 29.5
Hma1.2p1_3037F.1_g331960 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 5.2e-30 136.0 288 39.9
BolC6t36977H Brassica oleracea HOM05D006730 ORTHO05D008189 6.8e-30 135.6 315 29.8
COL.COLO4_28380 Corchorus olitorius HOM05D006730 ORTHO05D008189 8.9e-30 135.2 306 30.4
Hma1.2p1_0324F.1_g125720 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 1.2e-29 134.8 288 39.6
Sp7g05120 Schrenkiella parvula HOM05D006730 ORTHO05D008189 2.0e-29 134.0 315 30.8
Sed0020880 Sechium edule HOM05D006730 ORTHO05D008189 2.0e-29 134.0 352 30.4
TPR.G34183 Trifolium pratense HOM05D006730 ORTHO05D008189 3.4e-29 133.3 337 34.4
Thhalv10027675m.g Eutrema salsugineum HOM05D006730 ORTHO05D008189 4.4e-29 132.9 317 33.8
C06p17830 Brassica napus HOM05D006730 ORTHO05D008189 9.9e-29 131.7 347 29.1
AUR62005936 Chenopodium quinoa HOM05D006730 ORTHO05D008189 9.9e-29 131.7 314 30.3
Eucgr.A00038 Eucalyptus grandis HOM05D006730 ORTHO05D008189 1.3e-28 131.3 347 30.3
TAR633G2319 Trochodendron aralioides HOM05D006730 ORTHO05D008189 1.3e-28 131.3 248 37.5
Lj3A110T20 Lonicera japonica HOM05D006730 ORTHO05D008189 2.2e-28 130.6 327 34.6
arahy.Tifrunner.gnm1.ann1.S6BLSS Arachis hypogaea HOM05D006730 ORTHO05D008189 3.7e-28 129.8 314 31.8
Phvul.011G201600 Phaseolus vulgaris HOM05D006730 ORTHO05D008189 3.7e-28 129.8 354 32.5
Sc19g0000330 Simmondsia chinensis HOM05D006730 ORTHO05D008189 1.1e-27 128.3 349 29.5
VMungo0720G0522 Vigna mungo HOM05D006730 ORTHO05D008189 1.4e-27 127.9 345 31.6
ClCG09G018880 Citrullus lanatus HOM05D006730 ORTHO05D008189 1.9e-27 127.5 325 32.9
Oeu029987.1 Olea europaea HOM05D006730 ORTHO05D008189 1.2e-26 124.8 371 28.6
ECA233G5772 Erigeron canadensis HOM05D005219 ORTHO05D006451 4.6e-26 122.9 326 32.8
Psat7g208760 Pisum sativum HOM05D006730 ORTHO05D008189 4.6e-26 122.9 330 32.4
THA.LOC104805724 Tarenaya hassleriana HOM05D006730 ORTHO05D008189 7.8e-26 122.1 334 28.4
arahy.Tifrunner.gnm1.ann1.PF62HI Arachis hypogaea HOM05D006730 ORTHO05D008189 2.3e-25 120.6 302 34.1
Atru.chr4.1340 Acer truncatum HOM05D006730 ORTHO05D008189 5.1e-25 119.4 331 31.7
Lalb_Chr03g0025971 Lupinus albus HOM05D006730 ORTHO05D008189 5.1e-25 119.4 334 33.2
Lalb_Chr03g0026031 Lupinus albus HOM05D006730 ORTHO05D008189 5.1e-25 119.4 334 33.2
VMungo0647G1321 Vigna mungo HOM05D006730 ORTHO05D008189 5.1e-25 119.4 347 31.4
AT5G40520 Arabidopsis thaliana HOM05D006730 ORTHO05D008189 6.6e-25 119.0 349 31.2
CARHR138600 Cardamine hirsuta HOM05D006730 ORTHO05D008189 8.6e-25 118.6 303 31.0
EL10Ac9g22987 Beta vulgaris HOM05D006730 ORTHO05D008189 1.1e-24 118.2 322 28.6
Oeu002416.1 Olea europaea HOM05D006730 ORTHO05D008189 1.1e-24 118.2 372 27.4
Nitab4.5_0001586g0210 Nicotiana tabacum HOM05D006730 ORTHO05D008189 9.5e-24 115.2 360 27.8
TWI15G0430 Tripterygium wilfordii HOM05D006730 ORTHO05D008189 1.2e-23 114.8 324 34.0
CiPaw.01G173600 Carya illinoinensis HOM05D006730 ORTHO05D008189 4.7e-23 112.8 327 33.6
Sopen06g029510 Solanum pennellii HOM05D006730 ORTHO05D008189 4.7e-23 112.8 360 27.8
Nitab4.5_0001210g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 8.9e-22 108.6 380 26.3
Nitab4.5_0002782g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 1.5e-21 107.8 375 26.4
Solyc06g073160.4 Solanum lycopersicum HOM05D006730 ORTHO05D008189 2.0e-21 107.5 360 27.5
PGSC0003DMG400026917 Solanum tuberosum HOM05D006730 ORTHO05D008189 4.4e-21 106.3 360 26.9
Peaxi162Scf00180g00519 Petunia axillaris HOM05D006730 ORTHO05D008189 1.3e-20 104.8 344 26.5
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 4.9e-20 102.8 302 29.5
SGA_v2.0_scaffold94G28623 Striga asiatica HOM05D006730 ORTHO05D008189 9.2e-19 98.6 321 27.4
Ah.10g027080 Amaranthus hybridus HOM05D006730 ORTHO05D008189 2.1e-18 97.4 272 30.9
MSTRG.27276 Avicennia marina HOM05D006730 ORTHO05D008189 5.1e-17 92.8 340 24.1
Cc03_g12540 Coffea canephora HOM05D006730 ORTHO05D008189 6.6e-17 92.4 323 25.4
Lsat_1_v5_gn_5_69460 Lactuca sativa HOM05D006730 ORTHO05D008189 8.1e-15 85.5 253 27.3
Actinidia26680 Actinidia chinensis HOM05D006730 ORTHO05D008189 1.4e-14 84.7 87 46.0
CDE07G0581 Ceratophyllum demersum HOM05D006730 ORTHO05D008189 1.8e-14 84.3 309 27.5
SGA_v2.0_scaffold36G14479 Striga asiatica HOM05D000061 ORTHO05D008189 9.0e-14 82.0 292 27.4
SHI01154 Sapria himalayana HOM05D006730 ORTHO05D008189 2.6e-13 80.5 253 26.5
Gohir.A02G010550 Gossypium hirsutum HOM05D006730 ORTHO05D008189 3.4e-13 80.1 87 44.8
ATR0743G243 Amborella trichopoda HOM05D006730 ORTHO05D008189 4.2e-11 73.2 303 22.8
HanXRQChr12g0385981 Helianthus annuus HOM05D006730 ORTHO05D008189 4.2e-11 73.2 87 46.0
HanXRQChr17g0565921 Helianthus annuus HOM05D006730 ORTHO05D008189 2.1e-10 70.9 87 41.4
Hund25530 Selenicereus undatus HOM05D006730 ORTHO05D008189 8.7e-09 65.5 86 40.7
Gohir.A02G010500 Gossypium hirsutum HOM05D006730 ORTHO05D008189 1.5e-08 64.7 72 48.6
DCAR_027052 Daucus carota HOM05D006730 ORTHO05D008189 1.4e-06 58.2 85 36.5


User provided reference genes

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