Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G2979 Fragaria x ananassa HOM05D004469 ORTHO05D005429 7.3e-220 766.9 387 100.0
FAN28G2138 Fragaria x ananassa HOM05D004469 ORTHO05D005429 8.9e-109 397.9 236 92.4
FvH4_1g01990 Fragaria vesca HOM05D004469 ORTHO05D005429 1.9e-106 390.2 236 90.3
FAN23G0971 Fragaria x ananassa HOM05D004469 ORTHO05D005429 4.1e-106 389.0 236 90.7
FAN19G1855 Fragaria x ananassa HOM05D004469 ORTHO05D005429 5.4e-106 388.7 236 89.8
FAN26G0918 Fragaria x ananassa HOM05D004469 ORTHO05D005429 2.7e-105 386.3 236 90.7
RcHm_v2.0_Chr2g0087051 Rosa chinensis HOM05D004469 ORTHO05D005429 5.2e-101 372.1 236 86.4
RcHm_v2.0_Chr5g0061231 Rosa chinensis HOM05D004469 ORTHO05D005429 1.5e-84 317.4 236 76.3
MD15G1162100 Malus domestica HOM05D004469 ORTHO05D005429 2.1e-81 307.0 240 71.2
FvH4_3g33700 Fragaria vesca HOM05D004469 ORTHO05D005429 4.6e-81 305.8 236 73.7
FAN11G3069 Fragaria x ananassa HOM05D004469 ORTHO05D005429 1.1e-79 301.2 236 72.9
Prupe.7G257500 Prunus persica HOM05D004469 ORTHO05D005429 5.6e-79 298.9 229 74.7
FAN16G0997 Fragaria x ananassa HOM05D004469 ORTHO05D005429 7.4e-79 298.5 236 72.0
FAN21G2818 Fragaria x ananassa HOM05D004469 ORTHO05D005429 7.4e-79 298.5 236 72.0
FAN25G0032 Fragaria x ananassa HOM05D004469 ORTHO05D005429 7.9e-73 278.5 237 69.2
CiPaw.04G177500 Carya illinoinensis HOM05D004469 ORTHO05D005429 3.7e-70 269.6 219 68.0
Manes.14G119700 Manihot esculenta HOM05D004469 ORTHO05D005429 8.2e-70 268.5 231 62.3
Atru.chr7.2015 Acer truncatum HOM05D004469 ORTHO05D005429 1.1e-69 268.1 229 65.1
Cfa002260 Carpinus fangiana HOM05D004469 ORTHO05D005429 1.4e-69 267.7 231 65.4
CANSAT11G1945 Cannabis sativa HOM05D004469 ORTHO05D005429 5.3e-69 265.8 206 69.4
Potri.018G118143 Populus trichocarpa HOM05D004469 ORTHO05D005429 6.9e-69 265.4 261 58.2
Thecc.09G137700 Theobroma cacao HOM05D004469 ORTHO05D005429 6.9e-69 265.4 253 60.5
QL02p090812 Quercus lobata HOM05D004469 ORTHO05D005429 2.6e-68 263.5 216 67.1
Dinv41443 Davidia involucrata HOM05D004469 ORTHO05D005429 1.7e-67 260.8 215 66.0
Sabra06G0044100 Salix brachista HOM05D004469 ORTHO05D005429 2.9e-67 260.0 238 60.1
Duzib187G0975 Durio zibethinus HOM05D004469 ORTHO05D005429 1.9e-66 257.3 252 59.9
Haze_25443 Corylus avellana HOM05D004469 ORTHO05D005429 7.1e-66 255.4 236 62.7
Potri.006G061500 Populus trichocarpa HOM05D004469 ORTHO05D005429 7.1e-66 255.4 216 65.3
Glyma.09G091700 Glycine max HOM05D004469 ORTHO05D005429 4.6e-65 252.7 213 63.4
GSVIVG01012860001 Vitis vinifera HOM05D004469 ORTHO05D005429 4.6e-65 252.7 224 62.5
Gorai.004G109600 Gossypium raimondii HOM05D004469 ORTHO05D005429 6.0e-65 252.3 252 57.9
Gohir.A08G091100 Gossypium hirsutum HOM05D004469 ORTHO05D005429 1.0e-64 251.5 252 57.9
Ciclev10007887m.g Citrus clementina HOM05D004469 ORTHO05D005429 1.8e-64 250.8 238 60.1
Lj6g0024161 Lotus japonicus HOM05D004469 ORTHO05D005429 1.8e-64 250.8 238 57.6
Nn2g12194 Nelumbo nucifera HOM05D004469 ORTHO05D005429 2.3e-64 250.4 221 62.0
arahy.Tifrunner.gnm1.ann1.2E9WSC Arachis hypogaea HOM05D004469 ORTHO05D005429 3.9e-64 249.6 238 58.4
CSS0041761 Camellia sinensis var. sinensis HOM05D004469 ORTHO05D005429 3.9e-64 249.6 235 60.0
Glyma.15G198300 Glycine max HOM05D004469 ORTHO05D005429 5.1e-64 249.2 212 62.3
Gohir.D08G101600 Gossypium hirsutum HOM05D004469 ORTHO05D005429 5.1e-64 249.2 252 57.5
COL.COLO4_33364 Corchorus olitorius HOM05D004469 ORTHO05D005429 6.7e-64 248.8 253 56.9
Eucgr.L03235 Eucalyptus grandis HOM05D004469 ORTHO05D005429 8.7e-64 248.4 258 55.8
Phvul.009G212100 Phaseolus vulgaris HOM05D004469 ORTHO05D005429 8.7e-64 248.4 263 53.6
arahy.Tifrunner.gnm1.ann1.K75BJP Arachis hypogaea HOM05D004469 ORTHO05D005429 1.9e-63 247.3 238 57.1
TWI32G1222 Tripterygium wilfordii HOM05D004469 ORTHO05D005429 2.5e-63 246.9 229 60.3
Medtr2g450730 Medicago truncatula HOM05D004469 ORTHO05D005429 4.3e-63 246.1 215 60.9
PGR102G2677 Punica granatum HOM05D004469 ORTHO05D005429 5.7e-63 245.7 245 56.7
Cpa.g.sc46.70 Carica papaya HOM05D004469 ORTHO05D005429 2.2e-62 243.8 240 57.5
Nitab4.5_0002845g0050 Nicotiana tabacum HOM05D004469 ORTHO05D005429 4.8e-62 242.7 215 62.8
CAN.G1281.7 Capsicum annuum HOM05D004469 ORTHO05D005429 6.3e-62 242.3 239 57.3
Ca_03095_v3 Cicer arietinum L. HOM05D004469 ORTHO05D005429 6.3e-62 242.3 231 55.0
Sed0012323 Sechium edule HOM05D004469 ORTHO05D005429 6.3e-62 242.3 231 60.6
VMungo1309G2337 Vigna mungo HOM05D004469 ORTHO05D005429 8.2e-62 241.9 231 57.6
AL3G45030 Arabidopsis lyrata HOM05D004469 ORTHO05D005429 1.1e-61 241.5 241 55.6
Lalb_Chr11g0073091 Lupinus albus HOM05D004469 ORTHO05D005429 2.4e-61 240.4 251 55.8
Nitab4.5_0002286g0020 Nicotiana tabacum HOM05D004469 ORTHO05D005429 3.1e-61 240.0 215 62.8
Solyc07g007370.3 Solanum lycopersicum HOM05D004469 ORTHO05D005429 4.1e-61 239.6 207 63.3
AT2G12550 Arabidopsis thaliana HOM05D004469 ORTHO05D005429 5.3e-61 239.2 236 55.5
PGSC0003DMG400030724 Solanum tuberosum HOM05D004469 ORTHO05D005429 6.9e-61 238.8 207 63.8
Lj9C704T18 Lonicera japonica HOM05D004469 ORTHO05D005429 9.0e-61 238.4 253 56.1
Sopen07g003440 Solanum pennellii HOM05D004469 ORTHO05D005429 1.5e-60 237.7 207 63.3
RcHm_v2.0_Chr5g0079831 Rosa chinensis HOM05D004469 ORTHO05D005429 2.6e-60 236.9 334 51.8
CARHR105080 Cardamine hirsuta HOM05D004469 ORTHO05D005429 4.5e-60 236.1 233 55.4
TAR625G0398 Trochodendron aralioides HOM05D004469 ORTHO05D005429 4.5e-60 236.1 236 57.6
MBI14_g24228_MAGBIO Magnolia biondii HOM05D004469 ORTHO05D005429 1.0e-59 235.0 231 56.7
Psat1g021280 Pisum sativum HOM05D004469 ORTHO05D005429 1.0e-59 235.0 204 60.3
Actinidia26357 Actinidia chinensis HOM05D004469 ORTHO05D005429 2.2e-59 233.8 216 59.3
Migut.J01235 Erythranthe guttata HOM05D004469 ORTHO05D005429 2.9e-59 233.4 229 56.3
Actinidia14229 Actinidia chinensis HOM05D004469 ORTHO05D005429 6.5e-59 232.3 216 59.3
arahy.Tifrunner.gnm1.ann1.T08WW4 Arachis hypogaea HOM05D004469 ORTHO05D005429 6.5e-59 232.3 209 59.3
Sabra18G0101500 Salix brachista HOM05D004469 ORTHO05D005429 6.5e-59 232.3 249 55.4
THA.LOC104808947 Tarenaya hassleriana HOM05D004469 ORTHO05D005429 8.5e-59 231.9 257 50.6
Rhsim03G0253400 Rhododendron simsii HOM05D004469 ORTHO05D005429 1.4e-58 231.1 221 58.4
Peaxi162Scf00088g00521 Petunia axillaris HOM05D004469 ORTHO05D005429 1.9e-58 230.7 209 60.8
Lsat_1_v5_gn_5_92700 Lactuca sativa HOM05D004469 ORTHO05D005429 4.2e-58 229.6 211 59.2
Carub.0003s2782 Capsella rubella HOM05D004469 ORTHO05D005429 5.5e-58 229.2 232 55.2
Sabra18G0099700 Salix brachista HOM05D004469 ORTHO05D005429 7.2e-58 228.8 249 54.6
Thhalv10022623m.g Eutrema salsugineum HOM05D004469 ORTHO05D005429 9.4e-58 228.4 215 56.7
vmacro06114 Vaccinium macrocarpon HOM05D004469 ORTHO05D005429 2.1e-57 227.3 221 58.4
Eucgr.L03187 Eucalyptus grandis HOM05D004469 ORTHO05D005429 2.7e-57 226.9 185 64.9
Aqoxy7G03591 Aquilegia oxysepala HOM05D004469 ORTHO05D005429 4.6e-57 226.1 231 55.0
A03p44900 Brassica napus HOM05D004469 ORTHO05D005429 4.6e-57 226.1 234 53.0
SalBow1G3789 Salvia bowleyana HOM05D004469 ORTHO05D005429 4.6e-57 226.1 222 54.5
BcaC01g03128 Brassica carinata HOM05D004469 ORTHO05D005429 6.1e-57 225.7 221 54.8
BolC3t17859H Brassica oleracea HOM05D004469 ORTHO05D005429 6.1e-57 225.7 221 54.8
Cc06_g07630 Coffea canephora HOM05D004469 ORTHO05D005429 6.1e-57 225.7 243 54.7
C03p55780 Brassica napus HOM05D004469 ORTHO05D005429 7.9e-57 225.3 221 54.8
HanXRQChr10g0314151 Helianthus annuus HOM05D004469 ORTHO05D005429 1.0e-56 224.9 210 57.6
ECA234G1865 Erigeron canadensis HOM05D004469 ORTHO05D005429 1.4e-56 224.6 209 58.4
Sp3g26680 Schrenkiella parvula HOM05D004469 ORTHO05D005429 1.4e-56 224.6 212 56.6
BraA03t13626Z Brassica rapa HOM05D004469 ORTHO05D005429 3.0e-56 223.4 231 52.4
Thhalv10001944m.g Eutrema salsugineum HOM05D004469 ORTHO05D005429 1.1e-55 221.5 215 55.3
Aa31sc54G60 Aethionema arabicum HOM05D004469 ORTHO05D005429 3.3e-55 219.9 211 55.5
arahy.Tifrunner.gnm1.ann1.FNUG0A Arachis hypogaea HOM05D004469 ORTHO05D005429 3.3e-55 219.9 227 54.2
DCAR_014918 Daucus carota HOM05D004469 ORTHO05D005429 5.7e-55 219.2 235 55.7
BcaB08g34526 Brassica carinata HOM05D004469 ORTHO05D005429 9.7e-55 218.4 224 53.1
EL10Ac8g18788 Beta vulgaris HOM05D004469 ORTHO05D005429 2.8e-54 216.9 234 52.6
MELO3C004484.2 Cucumis melo HOM05D004469 ORTHO05D005429 2.8e-54 216.9 231 53.2
RcHm_v2.0_Chr5g0016251 Rosa chinensis HOM05D004469 ORTHO05D005429 2.8e-54 216.9 233 61.8
ClCG11G003510 Citrullus lanatus HOM05D004469 ORTHO05D005429 6.3e-54 215.7 233 54.5
Duzib168G2240 Durio zibethinus HOM05D004469 ORTHO05D005429 2.4e-53 213.8 238 54.2
AUR62011228 Chenopodium quinoa HOM05D004469 ORTHO05D005429 3.1e-53 213.4 231 51.9
AUR62020006 Chenopodium quinoa HOM05D004469 ORTHO05D005429 9.1e-53 211.8 231 51.5
MSTRG.19616 Avicennia marina HOM05D004469 ORTHO05D005429 1.0e-51 208.4 237 51.5
CsaV3_2G003380 Cucumis sativus L. HOM05D004469 ORTHO05D005429 2.2e-51 207.2 224 54.0
Hund09311 Selenicereus undatus HOM05D004469 ORTHO05D005429 2.2e-51 207.2 211 54.0
ATR0767G179 Amborella trichopoda HOM05D004469 ORTHO05D005429 3.8e-51 206.5 241 49.4
PSO210G6517 Papaver somniferum HOM05D004469 ORTHO05D005429 1.1e-50 204.9 242 53.3
Sc08g0006010 Simmondsia chinensis HOM05D004469 ORTHO05D005429 1.9e-50 204.1 248 47.2
Oeu028017.1 Olea europaea HOM05D004469 ORTHO05D005429 7.2e-50 202.2 226 53.5
CDE05G2521 Ceratophyllum demersum HOM05D004469 ORTHO05D005429 2.3e-48 197.2 211 53.6
RcHm_v2.0_Chr5g0072051 Rosa chinensis HOM05D004469 ORTHO05D005429 1.7e-46 191.0 212 59.4
unitig_27.g25106 Utricularia gibba HOM05D004469 ORTHO05D005429 1.5e-44 184.5 172 57.0
TPR.G23109 Trifolium pratense HOM05D004469 ORTHO05D005429 5.9e-44 182.6 204 50.0
HPP92_003256 Vanilla planifolia HOM05D004469 ORTHO05D005429 1.7e-43 181.0 173 53.8
Aqoxy3G02754 Aquilegia oxysepala HOM05D004469 ORTHO05D005429 4.7e-41 172.9 194 54.6
Duzib168G2148 Durio zibethinus HOM05D004469 ORTHO05D005429 1.4e-40 171.4 129 72.1
arahy.Tifrunner.gnm1.ann1.WC6UXQ Arachis hypogaea HOM05D004469 ORTHO05D005429 2.2e-38 164.1 237 45.1
SEGI_05144 Sequoiadendron giganteum HOM05D004469 ORTHO05D005429 8.2e-38 162.2 255 39.2
Eucgr.C04399 Eucalyptus grandis HOM05D004469 ORTHO05D005429 3.1e-37 160.2 140 60.7
Zm00001eb068670 Zea mays HOM05D004469 ORTHO05D005429 3.8e-35 153.3 164 50.0
arahy.Tifrunner.gnm1.ann1.CP8KSN Arachis hypogaea HOM05D004469 ORTHO05D005429 1.9e-34 151.0 274 39.4
Glyma.17G107100 Glycine max HOM05D004469 ORTHO05D005429 8.0e-33 145.6 235 42.6
AagrBONN_evm.TU.Sc2ySwM_344.1954 Anthoceros agrestis HOM05D004469 ORTHO05D005429 1.8e-32 144.4 273 37.7
Pp3c3_18690 Physcomitrium patens HOM05D004469 ORTHO05D005429 1.8e-32 144.4 258 38.0
Nitab4.5_0010073g0010 Nicotiana tabacum HOM05D004469 ORTHO05D005429 1.2e-31 141.7 95 75.8
SMO367G0076 Selaginella moellendorffii HOM05D004469 ORTHO05D005429 1.2e-31 141.7 232 40.1
Mapoly0101s0042 Marchantia polymorpha HOM05D004469 ORTHO05D005429 1.5e-31 141.4 243 38.7
CBR_g57083 Chara braunii HOM05D000019 ORTHO05D000048 9.7e-31 138.7 219 42.0
RcHm_v2.0_Chr5g0016151 Rosa chinensis HOM05D004469 ORTHO05D005429 3.7e-30 136.7 99 80.8
RcHm_v2.0_Chr7g0226011 Rosa chinensis HOM05D004469 ORTHO05D345385 1.1e-26 125.2 81 79.0
RcHm_v2.0_Chr1g0341151 Rosa chinensis HOM05D004469 ORTHO05D005429 2.5e-26 124.0 84 81.0
RcHm_v2.0_Chr2g0147341 Rosa chinensis HOM05D004469 ORTHO05D005429 5.5e-26 122.9 99 76.8
RcHm_v2.0_Chr7g0241381 Rosa chinensis HOM05D004469 ORTHO05D005429 2.7e-25 120.6 99 76.8
RcHm_v2.0_Chr5g0061311 Rosa chinensis HOM05D004469 ORTHO05D005429 2.8e-22 110.5 179 46.4
RcHm_v2.0_Chr5g0016141 Rosa chinensis HOM05D004469 ORTHO05D005429 3.1e-21 107.1 67 86.6
RcHm_v2.0_Chr1g0314541 Rosa chinensis HOM05D004469 ORTHO05D005429 1.6e-20 104.8 67 85.1
Cre03.g205650 Chlamydomonas reinhardtii HOM05D004469 ORTHO05D005429 6.1e-17 92.8 163 35.0
CiPaw.04G177800 Carya illinoinensis HOM05D004469 ORTHO05D005429 3.4e-15 87.0 59 74.6
RcHm_v2.0_Chr5g0069491 Rosa chinensis HOM05D004469 ORTHO05D005429 4.4e-15 86.7 54 83.3
Oeu028136.1 Olea europaea HOM05D004469 ORTHO05D005429 9.8e-15 85.5 107 52.3
HanXRQChr04g0107841 Helianthus annuus HOM05D004469 ORTHO05D005429 1.2e-12 78.6 63 63.5
Eucgr.E04269 Eucalyptus grandis HOM05D004469 ORTHO05D005429 4.7e-09 66.6 46 69.6
RcHm_v2.0_Chr1g0314551 Rosa chinensis HOM05D004469 ORTHO05D342664 1.4e-08 65.1 41 82.9
Thecc.08G193600 Theobroma cacao HOM05D004469 ORTHO05D005429 4.0e-08 63.5 54 59.3
vmacro11088 Vaccinium macrocarpon HOM05D004469 ORTHO05D426737 2.0e-07 61.2 42 66.7
RcHm_v2.0_Chr1g0341141 Rosa chinensis HOM05D004469 ORTHO05D005429 5.8e-07 59.7 70 50.0


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