Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.4e-137 493.0 264 100.0
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 9.6e-46 188.0 137 78.8
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.7e-40 169.9 137 73.0
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.7e-40 169.9 137 73.0
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 4.0e-36 156.0 137 70.8
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 7.1e-33 145.2 137 66.4
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.2e-26 123.6 117 65.8
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 1.1e-22 111.3 130 56.2
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 7.4e-22 108.6 148 49.3
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 7.4e-22 108.6 139 54.7
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 6.9e-20 102.1 125 55.2
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 2.6e-19 100.1 157 47.1
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 4.5e-19 99.4 135 52.6
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 1.3e-18 97.8 126 54.8
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 1.3e-18 97.8 138 53.6
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 1.7e-18 97.4 127 54.3
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 3.8e-18 96.3 112 55.4
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 6.5e-18 95.5 112 57.1
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 2.5e-17 93.6 146 50.7
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 5.5e-17 92.4 152 48.7
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 7.1e-17 92.0 124 53.2
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 1.2e-16 91.3 133 49.6
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 2.1e-16 90.5 125 52.8
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 2.1e-16 90.5 125 52.8
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 3.5e-16 89.7 127 52.8
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 7.9e-16 88.6 125 52.0
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 7.9e-16 88.6 110 53.6
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 1.0e-15 88.2 150 48.7
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 1.1e-14 84.7 125 50.4
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 1.1e-14 84.7 125 50.4
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 1.1e-14 84.7 125 50.4
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 3.3e-14 83.2 140 50.0
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 4.3e-14 82.8 105 54.3
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 4.3e-14 82.8 80 62.5
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 7.4e-14 82.0 147 44.2
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 5.3e-12 75.9 126 43.7
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 6.9e-12 75.5 108 50.0
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 1.5e-11 74.3 71 60.6
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 1.5e-11 74.3 135 45.2
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 2.0e-11 73.9 140 45.0
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.0e-11 73.9 139 43.9
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 2.0e-11 73.9 131 44.3
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 3.4e-11 73.2 138 44.2
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 4.5e-11 72.8 73 58.9
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 5.9e-11 72.4 125 48.0
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 7.6e-11 72.0 109 48.6
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 1.3e-10 71.2 117 46.2
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 1.7e-10 70.9 71 60.6
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 2.2e-10 70.5 151 39.1
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 2.2e-10 70.5 137 42.3
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 5.0e-10 69.3 117 46.2
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 1.1e-09 68.2 128 43.0
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 1.4e-09 67.8 126 44.4
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 1.9e-09 67.4 64 59.4
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 2.5e-09 67.0 69 59.4
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 3.2e-09 66.6 137 45.3
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 4.2e-09 66.2 138 45.7
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 5.5e-09 65.9 68 58.8
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 5.5e-09 65.9 108 44.4
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 7.2e-09 65.5 141 41.8
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 1.6e-08 64.3 108 45.4
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 2.7e-08 63.5 120 45.0
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 3.6e-08 63.2 141 42.6
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 4.6e-08 62.8 136 43.4
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 6.1e-08 62.4 121 44.6
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 1.3e-07 61.2 130 40.8
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 1.3e-07 61.2 147 38.1
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 1.8e-07 60.8 120 42.5
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 2.3e-07 60.5 251 27.5
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 2.3e-07 60.5 99 41.4
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 3.0e-07 60.1 153 38.6
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 3.0e-07 60.1 134 41.0
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 3.9e-07 59.7 141 41.8
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 5.1e-07 59.3 133 40.6
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 5.1e-07 59.3 144 42.4
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 8.7e-07 58.5 137 40.1
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 1.9e-06 57.4 140 40.0
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 2.5e-06 57.0 156 37.2
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 3.3e-06 56.6 108 41.7
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 3.3e-06 56.6 149 36.9
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 3.3e-06 56.6 135 38.5
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 4.3e-06 56.2 139 36.7
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 5.7e-06 55.8 32 81.2


User provided reference genes

Program Settings