Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G2899 Fragaria x ananassa HOM05D005407 ORTHO05D006544 2.7e-179 632.1 367 100.0
FAN23G2725 Fragaria x ananassa HOM05D005407 ORTHO05D006544 3.2e-164 582.0 370 92.7
FvH4_1g17130 Fragaria vesca HOM05D005407 ORTHO05D006544 1.4e-156 556.6 371 89.8
FAN19G1545 Fragaria x ananassa HOM05D005407 ORTHO05D006544 9.2e-156 553.9 371 89.5
FAN26G3453 Fragaria x ananassa HOM05D005407 ORTHO05D006544 4.6e-155 551.6 371 89.2
RcHm_v2.0_Chr2g0107301 Rosa chinensis HOM05D005407 ORTHO05D006544 9.0e-111 404.4 372 71.8
MD15G1292600 Malus domestica HOM05D005407 ORTHO05D006544 2.8e-43 180.3 383 45.7
Prupe.6G224800 Prunus persica HOM05D005407 ORTHO05D006544 6.0e-38 162.5 329 48.6
MD02G1181700 Malus domestica HOM05D005407 ORTHO05D006544 1.0e-37 161.8 406 42.6
Dinv26896 Davidia involucrata HOM05D005407 ORTHO05D006544 1.7e-29 134.4 378 36.0
Ciclev10025829m.g Citrus clementina HOM05D005407 ORTHO05D006544 1.9e-28 131.0 392 33.9
Nn5g30501 Nelumbo nucifera HOM05D005407 ORTHO05D006544 5.6e-28 129.4 374 34.5
CANSAT01G3084 Cannabis sativa HOM05D005407 ORTHO05D006544 9.0e-26 122.1 402 34.1
Gohir.A12G074500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.5e-25 121.3 368 36.4
Gohir.A11G217700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 2.0e-25 120.9 369 33.6
Gorai.007G220900 Gossypium raimondii HOM05D005407 ORTHO05D006544 9.9e-25 118.6 369 34.4
Cpa.g.sc6.55 Carica papaya HOM05D005407 ORTHO05D006544 1.7e-24 117.9 360 38.3
Gohir.A02G153500 Gossypium hirsutum HOM05D005407 ORTHO05D006544 4.9e-24 116.3 313 37.4
Gohir.D11G205800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 8.4e-24 115.5 371 34.2
Gorai.008G080000 Gossypium raimondii HOM05D005407 ORTHO05D006544 1.4e-23 114.8 373 34.9
Duzib264G0474 Durio zibethinus HOM05D005407 ORTHO05D006544 9.3e-23 112.1 379 33.2
Gohir.D12G072700 Gossypium hirsutum HOM05D005407 ORTHO05D006544 6.0e-22 109.4 368 34.5
CiPaw.01G007800 Carya illinoinensis HOM05D005407 ORTHO05D006544 3.9e-21 106.7 377 34.0
Nitab4.5_0007941g0010 Nicotiana tabacum HOM05D005407 ORTHO05D006544 3.9e-21 106.7 360 32.5
Sabra05G0114800 Salix brachista HOM05D005407 ORTHO05D006544 3.9e-21 106.7 320 34.4
Sabra05G0115900 Salix brachista HOM05D005407 ORTHO05D006544 3.9e-21 106.7 320 34.4
CsaV3_6G043820 Cucumis sativus L. HOM05D005407 ORTHO05D006544 8.7e-21 105.5 366 31.1
PSO541G0358 Papaver somniferum HOM05D005407 ORTHO05D006544 8.7e-21 105.5 306 38.9
Potri.007G051800 Populus trichocarpa HOM05D005407 ORTHO05D006544 8.7e-21 105.5 367 33.5
Duzib187G0216 Durio zibethinus HOM05D005407 ORTHO05D006544 1.1e-20 105.1 384 34.9
Potri.005G145100 Populus trichocarpa HOM05D005407 ORTHO05D006544 4.3e-20 103.2 370 30.8
Gohir.D03G026900 Gossypium hirsutum HOM05D005407 ORTHO05D006544 9.6e-20 102.1 313 39.0
CiPaw.02G004700 Carya illinoinensis HOM05D005407 ORTHO05D006544 1.6e-19 101.3 390 34.9
QL06p039956 Quercus lobata HOM05D005407 ORTHO05D006544 1.6e-19 101.3 376 37.2
Nitab4.5_0003878g0070 Nicotiana tabacum HOM05D005407 ORTHO05D006544 4.8e-19 99.8 358 32.1
arahy.Tifrunner.gnm1.ann1.IRX7P6 Arachis hypogaea HOM05D005407 ORTHO05D006544 6.2e-19 99.4 361 35.2
Gorai.003G028600 Gossypium raimondii HOM05D005407 ORTHO05D006544 8.1e-19 99.0 313 38.7
GSVIVG01000158001 Vitis vinifera HOM05D005407 ORTHO05D006544 1.8e-18 97.8 300 36.3
Nn1g04631 Nelumbo nucifera HOM05D005407 ORTHO05D006544 2.4e-18 97.4 367 31.3
Sabra07G0045500 Salix brachista HOM05D005407 ORTHO05D006544 3.1e-18 97.1 377 33.4
TAR628G1677 Trochodendron aralioides HOM05D005407 ORTHO05D006544 3.1e-18 97.1 386 35.8
arahy.Tifrunner.gnm1.ann1.UV71K9 Arachis hypogaea HOM05D005407 ORTHO05D006544 4.0e-18 96.7 364 35.2
Cfa004094 Carpinus fangiana HOM05D005407 ORTHO05D006544 5.3e-18 96.3 305 36.7
Duzib147G1232 Durio zibethinus HOM05D005407 ORTHO05D006544 1.2e-17 95.1 376 33.0
Thecc.01G067900 Theobroma cacao HOM05D005407 ORTHO05D006544 1.2e-17 95.1 370 35.4
ClCG01G017290 Citrullus lanatus HOM05D005407 ORTHO05D006544 1.5e-17 94.7 363 33.1
Manes.13G114000 Manihot esculenta HOM05D005407 ORTHO05D006544 1.5e-17 94.7 365 32.9
Sopen02g037270 Solanum pennellii HOM05D005407 ORTHO05D006544 1.5e-17 94.7 363 29.5
MSTRG.2839 Avicennia marina HOM05D005407 ORTHO05D006544 2.0e-17 94.4 368 29.1
MELO3C007607.2 Cucumis melo HOM05D005407 ORTHO05D006544 1.3e-16 91.7 368 32.3
Lj4g0004383 Lotus japonicus HOM05D005407 ORTHO05D006544 1.7e-16 91.3 330 35.8
Haze_15320 Corylus avellana HOM05D005407 ORTHO05D006544 2.2e-16 90.9 359 35.1
Glyma.05G103000 Glycine max HOM05D005407 ORTHO05D006544 2.2e-16 90.9 362 34.8
Solyc02g092720.1 Solanum lycopersicum HOM05D005407 ORTHO05D006544 6.4e-16 89.4 365 28.8
Eucgr.I00726 Eucalyptus grandis HOM05D005407 ORTHO05D006544 8.4e-16 89.0 384 33.1
VMungo1011G0001 Vigna mungo HOM05D005407 ORTHO05D006544 1.4e-15 88.2 362 34.5
MSTRG.3457 Avicennia marina HOM05D005407 ORTHO05D006544 1.9e-15 87.8 373 27.9
PSO675G4008 Papaver somniferum HOM05D005407 ORTHO05D006544 1.9e-15 87.8 305 37.4
TWI09G0600 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 2.4e-15 87.4 339 33.0
Psat4g083080 Pisum sativum HOM05D005407 ORTHO05D006544 4.2e-15 86.7 362 34.8
CAN.G1075.9 Capsicum annuum HOM05D005407 ORTHO05D006544 2.1e-14 84.3 358 27.1
Actinidia21238 Actinidia chinensis HOM05D005407 ORTHO05D006544 4.6e-14 83.2 328 34.1
PGSC0003DMG400024943 Solanum tuberosum HOM05D005407 ORTHO05D006544 1.3e-13 81.6 325 28.9
SGA_v2.0_scaffold15G07407 Striga asiatica HOM05D005407 ORTHO05D006544 1.8e-13 81.3 250 34.0
MSTRG.23698 Avicennia marina HOM05D005407 ORTHO05D006544 2.3e-13 80.9 376 27.9
TPR.G23890 Trifolium pratense HOM05D005407 ORTHO05D006544 2.3e-13 80.9 358 33.8
AL8G43980 Arabidopsis lyrata HOM05D005407 ORTHO05D006544 3.0e-13 80.5 233 33.9
Sed0008783 Sechium edule HOM05D005407 ORTHO05D006544 3.9e-13 80.1 359 31.8
Oeu040602.1 Olea europaea HOM05D005407 ORTHO05D006544 5.1e-13 79.7 356 30.3
THA.LOC104827519 Tarenaya hassleriana HOM05D005407 ORTHO05D006544 6.7e-13 79.3 217 34.1
AT5G67350 Arabidopsis thaliana HOM05D005407 ORTHO05D006544 1.5e-12 78.2 228 32.9
Aqoxy6G02765 Aquilegia oxysepala HOM05D005407 ORTHO05D006544 2.5e-12 77.4 185 38.9
Glyma.17G164300 Glycine max HOM05D005407 ORTHO05D006544 4.3e-12 76.6 356 32.0
Atru.chr3.207 Acer truncatum HOM05D005407 ORTHO05D006544 9.6e-12 75.5 202 41.1
HanXRQChr12g0373231 Helianthus annuus HOM05D005407 ORTHO05D006544 1.6e-11 74.7 359 27.6
Lsat_1_v5_gn_3_87740 Lactuca sativa HOM05D005407 ORTHO05D006544 1.6e-11 74.7 324 28.4
DCAR_021471 Daucus carota HOM05D005407 ORTHO05D006544 2.1e-11 74.3 373 27.9
SalBow1G5175 Salvia bowleyana HOM05D005407 ORTHO05D006544 2.8e-11 73.9 235 33.6
Cc07_g06740 Coffea canephora HOM05D005407 ORTHO05D006544 3.7e-11 73.6 366 30.3
Carub.0008s2714 Capsella rubella HOM05D005407 ORTHO05D006544 4.8e-11 73.2 213 32.4
CARHR280260 Cardamine hirsuta HOM05D005407 ORTHO05D006544 4.8e-11 73.2 234 31.6
TWI53G1118 Tripterygium wilfordii HOM05D005407 ORTHO05D006544 6.2e-11 72.8 369 29.5
EL10Ac6g15663 Beta vulgaris HOM05D005407 ORTHO05D006544 8.1e-11 72.4 321 31.8
Gorai.011G107400 Gossypium raimondii HOM05D005407 ORTHO05D006544 8.1e-11 72.4 314 30.3
Dinv30062 Davidia involucrata HOM05D005407 ORTHO05D006544 1.1e-10 72.0 306 34.0
Migut.H00374 Erythranthe guttata HOM05D005407 ORTHO05D006544 1.4e-10 71.6 235 34.5
Gohir.D10G097800 Gossypium hirsutum HOM05D005407 ORTHO05D006544 1.8e-10 71.2 314 30.6
Lsat_1_v5_gn_4_162000 Lactuca sativa HOM05D005407 ORTHO05D006544 1.8e-10 71.2 364 25.8
Glyma.11G050800 Glycine max HOM05D005407 ORTHO05D006544 2.4e-10 70.9 361 28.8
Gohir.A10G090300 Gossypium hirsutum HOM05D005407 ORTHO05D006544 2.4e-10 70.9 314 32.2
C09p11100 Brassica napus HOM05D005407 ORTHO05D006544 4.0e-10 70.1 242 33.5
A07p16540 Brassica napus HOM05D005407 ORTHO05D006544 9.0e-10 68.9 226 32.3
BraA07t29378Z Brassica rapa HOM05D005407 ORTHO05D006544 9.0e-10 68.9 226 32.3
BolC7t42952H Brassica oleracea HOM05D005407 ORTHO05D006544 1.5e-09 68.2 228 32.0
BcaB04g20064 Brassica carinata HOM05D005407 ORTHO05D006544 2.0e-09 67.8 231 32.5
BcaC04g23209 Brassica carinata HOM05D005407 ORTHO05D006544 2.0e-09 67.8 230 32.6
BolC9t53999H Brassica oleracea HOM05D005407 ORTHO05D006544 2.6e-09 67.4 239 32.6
Sp2g29310 Schrenkiella parvula HOM05D005407 ORTHO05D006544 2.6e-09 67.4 228 31.6
Lj2g0008966 Lotus japonicus HOM05D005407 ORTHO05D006544 5.8e-09 66.2 358 26.8
Glyma.01G191400 Glycine max HOM05D005407 ORTHO05D006544 9.9e-09 65.5 365 31.5
Rhsim08G0096100 Rhododendron simsii HOM05D005407 ORTHO05D006544 9.9e-09 65.5 182 35.7
BcaC04g19788 Brassica carinata HOM05D005407 ORTHO05D006544 1.7e-08 64.7 242 31.8
C09p51650 Brassica napus HOM05D005407 ORTHO05D006544 1.7e-08 64.7 242 31.8
BolC9t58026H Brassica oleracea HOM05D005407 ORTHO05D006544 1.7e-08 64.7 242 31.8
Phvul.002G013600 Phaseolus vulgaris HOM05D005407 ORTHO05D006544 2.2e-08 64.3 363 32.0
SGA_v2.0_scaffold143G35780 Striga asiatica HOM05D005407 ORTHO05D006544 4.9e-08 63.2 251 31.5
Lalb_Chr16g0389101 Lupinus albus HOM05D005407 ORTHO05D006544 6.4e-08 62.8 300 31.0
A09p09420 Brassica napus HOM05D005407 ORTHO05D006544 8.4e-08 62.4 231 32.0
Peaxi162Scf00365g00076 Petunia axillaris HOM05D005407 ORTHO05D006544 1.1e-07 62.0 236 30.5
BraA09t36591Z Brassica rapa HOM05D005407 ORTHO05D006544 1.9e-07 61.2 238 29.8
Thhalv10005384m.g Eutrema salsugineum HOM05D005407 ORTHO05D006544 1.9e-07 61.2 206 32.0
VMungo1215G1030 Vigna mungo HOM05D005407 ORTHO05D006544 1.9e-07 61.2 357 32.8
PGR004G2820 Punica granatum HOM05D005407 ORTHO05D006544 3.2e-07 60.5 375 32.8
Os03g0439000 Oryza sativa ssp. japonica HOM05D013881 ORTHO05D016369 4.2e-07 60.1 192 36.5
Actinidia32821 Actinidia chinensis HOM05D005407 ORTHO05D006544 5.5e-07 59.7 234 33.8
Peaxi162Scf00264g00321 Petunia axillaris HOM05D005407 ORTHO05D006544 3.5e-06 57.0 209 29.7
vmacro17985 Vaccinium macrocarpon HOM05D005407 ORTHO05D006544 3.5e-06 57.0 122 38.5
unitig_52.g17607 Utricularia gibba HOM05D005407 ORTHO05D006544 4.6e-06 56.6 241 28.6
TAR376G1145 Trochodendron aralioides HOM05D005407 ORTHO05D006544 6.0e-06 56.2 259 32.8


User provided reference genes

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