Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G2862 Fragaria x ananassa HOM05D006972 ORTHO05D008519 2.6e-65 251.9 129 100.0
FvH4_1g10330 Fragaria vesca HOM05D006972 ORTHO05D008519 1.5e-57 226.1 128 93.0
FAN23G2574 Fragaria x ananassa HOM05D006972 ORTHO05D008519 4.7e-54 214.5 111 100.0
FAN19G2622 Fragaria x ananassa HOM05D006972 ORTHO05D008519 1.8e-53 212.6 118 94.9
FAN26G0227 Fragaria x ananassa HOM05D006972 ORTHO05D008519 3.9e-53 211.5 111 97.3
RcHm_v2.0_Chr2g0097181 Rosa chinensis HOM05D006972 ORTHO05D008519 4.8e-51 204.5 118 89.8
RcHm_v2.0_Chr1g0346531 Rosa chinensis HOM05D006972 ORTHO05D008519 6.5e-48 194.1 120 83.3
RcHm_v2.0_Chr2g0090391 Rosa chinensis HOM05D006972 ORTHO05D008519 1.1e-47 193.4 120 83.3
Glyma.01G158800 Glycine max HOM05D006972 ORTHO05D008519 3.0e-45 185.3 109 84.4
arahy.Tifrunner.gnm1.ann1.B19VPR Arachis hypogaea HOM05D006972 ORTHO05D008519 4.0e-45 184.9 110 81.8
arahy.Tifrunner.gnm1.ann1.K20VQB Arachis hypogaea HOM05D006972 ORTHO05D008519 4.0e-45 184.9 110 81.8
Potri.005G101501 Populus trichocarpa HOM05D006972 ORTHO05D008519 6.7e-45 184.1 110 79.1
Lj2g0018473 Lotus japonicus HOM05D006972 ORTHO05D008519 8.8e-45 183.7 110 82.7
PSO541G2195 Papaver somniferum HOM05D006972 ORTHO05D008519 8.8e-45 183.7 110 80.0
Psat2g148200 Pisum sativum HOM05D006972 ORTHO05D008519 8.8e-45 183.7 110 82.7
Atru.chr3.134 Acer truncatum HOM05D006972 ORTHO05D008519 1.2e-44 183.3 109 81.7
CiPaw.08G181600 Carya illinoinensis HOM05D006972 ORTHO05D008519 1.2e-44 183.3 111 80.2
MELO3C013724.2 Cucumis melo HOM05D006972 ORTHO05D008519 1.2e-44 183.3 109 79.8
CsaV3_3G000300 Cucumis sativus L. HOM05D006972 ORTHO05D008519 1.2e-44 183.3 109 79.8
Manes.01G155400 Manihot esculenta HOM05D006972 ORTHO05D008519 1.2e-44 183.3 109 80.7
TPR.G33865 Trifolium pratense HOM05D006972 ORTHO05D008519 1.5e-44 183.0 110 82.7
ClCG10G000270 Citrullus lanatus HOM05D006972 ORTHO05D008519 2.6e-44 182.2 109 79.8
Medtr5g024200 Medicago truncatula HOM05D006972 ORTHO05D008519 2.6e-44 182.2 111 82.0
PSO675G3277 Papaver somniferum HOM05D006972 ORTHO05D008519 3.3e-44 181.8 115 76.5
Ciclev10026547m.g Citrus clementina HOM05D006972 ORTHO05D008519 4.4e-44 181.4 112 80.4
Eucgr.I02225 Eucalyptus grandis HOM05D006972 ORTHO05D008519 5.7e-44 181.0 109 78.0
TWI73G0968 Tripterygium wilfordii HOM05D006972 ORTHO05D008519 5.7e-44 181.0 109 80.7
Prupe.7G182900 Prunus persica HOM05D006972 ORTHO05D008519 7.5e-44 180.6 117 80.3
Rhsim10G0195900 Rhododendron simsii HOM05D006972 ORTHO05D008519 7.5e-44 180.6 109 80.7
Sed0027466 Sechium edule HOM05D006972 ORTHO05D008519 7.5e-44 180.6 109 79.8
Haze_03661 Corylus avellana HOM05D006972 ORTHO05D008519 1.7e-43 179.5 113 77.9
Zm00001eb002450 Zea mays HOM05D006972 ORTHO05D008519 1.7e-43 179.5 109 78.0
Ca_24981_v3 Cicer arietinum L. HOM05D006972 ORTHO05D008519 2.2e-43 179.1 109 81.7
Cc07_g11850 Coffea canephora HOM05D006972 ORTHO05D008519 2.2e-43 179.1 109 78.9
Lalb_Chr16g0380011 Lupinus albus HOM05D006972 ORTHO05D008519 2.2e-43 179.1 110 79.1
Lsat_1_v5_gn_2_73640 Lactuca sativa HOM05D006972 ORTHO05D008519 3.7e-43 178.3 110 80.0
TAR628G0904 Trochodendron aralioides HOM05D006972 ORTHO05D008519 4.8e-43 177.9 109 78.0
Cfa007077 Carpinus fangiana HOM05D006972 ORTHO05D008519 6.3e-43 177.6 111 77.5
MBI05_g14344_MAGBIO Magnolia biondii HOM05D006972 ORTHO05D008519 6.3e-43 177.6 110 79.1
Nn5g30989 Nelumbo nucifera HOM05D006972 ORTHO05D008519 6.3e-43 177.6 109 78.9
Haze_03655 Corylus avellana HOM05D006972 ORTHO05D008519 8.2e-43 177.2 111 78.4
GSVIVG01026641001 Vitis vinifera HOM05D006972 ORTHO05D008519 1.1e-42 176.8 115 79.1
Cpa.g.sc365.5 Carica papaya HOM05D006972 ORTHO05D008519 1.4e-42 176.4 109 77.1
Oeu012451.1 Olea europaea HOM05D006972 ORTHO05D008519 1.8e-42 176.0 109 79.8
HanXRQChr14g0442531 Helianthus annuus HOM05D006972 ORTHO05D008519 2.4e-42 175.6 110 80.9
ECA238G2655 Erigeron canadensis HOM05D006972 ORTHO05D008519 3.1e-42 175.3 111 79.3
Migut.L00961 Erythranthe guttata HOM05D006972 ORTHO05D008519 3.1e-42 175.3 110 80.0
Phvul.002G116601 Phaseolus vulgaris HOM05D006972 ORTHO05D008519 3.1e-42 175.3 109 81.7
MSTRG.3630 Avicennia marina HOM05D006972 ORTHO05D008519 4.1e-42 174.9 115 73.0
Actinidia17360 Actinidia chinensis HOM05D006972 ORTHO05D008519 5.3e-42 174.5 109 77.1
Nitab4.5_0005297g0020 Nicotiana tabacum HOM05D006972 ORTHO05D008519 7.0e-42 174.1 109 77.1
VMungo1215G1992 Vigna mungo HOM05D006972 ORTHO05D008519 7.0e-42 174.1 109 80.7
SalBow5G0785 Salvia bowleyana HOM05D006972 ORTHO05D008519 1.2e-41 173.3 109 78.0
vmacro20633 Vaccinium macrocarpon HOM05D006972 ORTHO05D008519 1.2e-41 173.3 109 74.3
Solyc03g032120.3 Solanum lycopersicum HOM05D006972 ORTHO05D008519 1.6e-41 172.9 109 76.1
Gohir.A07G171100 Gossypium hirsutum HOM05D006972 ORTHO05D008519 2.0e-41 172.6 112 73.2
Nitab4.5_0000495g0120 Nicotiana tabacum HOM05D006972 ORTHO05D008519 2.0e-41 172.6 109 76.1
CSS0043244 Camellia sinensis var. sinensis HOM05D006972 ORTHO05D008519 2.7e-41 172.2 109 74.3
Gohir.D07G177900 Gossypium hirsutum HOM05D006972 ORTHO05D008519 2.7e-41 172.2 119 70.6
CANSAT25G3183 Cannabis sativa HOM05D006972 ORTHO05D008519 3.5e-41 171.8 109 77.1
CAN.G354.14 Capsicum annuum HOM05D006972 ORTHO05D008519 5.9e-41 171.0 109 75.2
CDE04G1133 Ceratophyllum demersum HOM05D006972 ORTHO05D008519 5.9e-41 171.0 109 73.4
COL.COLO4_24144 Corchorus olitorius HOM05D006972 ORTHO05D008519 7.7e-41 170.6 118 72.0
Gorai.001G199000 Gossypium raimondii HOM05D006972 ORTHO05D008519 1.0e-40 170.2 119 69.7
QL06p052953 Quercus lobata HOM05D006972 ORTHO05D008519 1.0e-40 170.2 131 67.2
Aqoxy5G01011 Aquilegia oxysepala HOM05D006972 ORTHO05D008519 2.2e-40 169.1 109 76.1
AL8G45620 Arabidopsis lyrata HOM05D006972 ORTHO05D008519 5.0e-40 167.9 109 72.5
Sc03g0003950 Simmondsia chinensis HOM05D006972 ORTHO05D008519 5.0e-40 167.9 113 69.0
THA.LOC104826441 Tarenaya hassleriana HOM05D006972 ORTHO05D008519 6.5e-40 167.5 109 75.2
Duzib147G0479 Durio zibethinus HOM05D006972 ORTHO05D008519 5.5e-39 164.5 112 68.8
AT5G66005 Arabidopsis thaliana HOM05D006972 ORTHO05D008519 9.4e-39 163.7 109 70.6
Thecc.01G005600 Theobroma cacao HOM05D006972 ORTHO05D008519 2.1e-38 162.5 118 66.1
SGA_v2.0_scaffold132G34519 Striga asiatica HOM05D006972 ORTHO05D008519 3.0e-37 158.7 109 71.6
ATR0807G046 Amborella trichopoda HOM05D006972 ORTHO05D008519 5.2e-37 157.9 109 69.7
Hund19696 Selenicereus undatus HOM05D006972 ORTHO05D008519 1.5e-36 156.4 109 68.8
EL10Ac5g11121 Beta vulgaris HOM05D006972 ORTHO05D008519 1.7e-35 152.9 109 66.1
AUR62021571 Chenopodium quinoa HOM05D006972 ORTHO05D008519 1.7e-35 152.9 109 65.1
HPP92_026034 Vanilla planifolia HOM05D006972 ORTHO05D008519 2.8e-35 152.1 109 66.1
AUR62008520 Chenopodium quinoa HOM05D006972 ORTHO05D008519 4.8e-35 151.4 109 64.2
Carub.0008s2851 Capsella rubella HOM05D006972 ORTHO05D008519 8.3e-35 150.6 110 70.0
Ah.02g113990 Amaranthus hybridus HOM05D006972 ORTHO05D008519 1.4e-34 149.8 109 62.4
RcHm_v2.0_Chr5g0047551 Rosa chinensis HOM05D006972 ORTHO05D008519 3.1e-34 148.7 81 91.4
Lsat_1_v5_gn_5_10160 Lactuca sativa HOM05D006972 ORTHO05D008519 2.7e-33 145.6 111 67.6
MD15G1231300 Malus domestica HOM05D006972 ORTHO05D008519 4.5e-33 144.8 86 80.2
Peaxi162Scf00122g02416 Petunia axillaris HOM05D006972 ORTHO05D008519 3.8e-32 141.7 82 80.5
Os03g0130750 Oryza sativa ssp. japonica HOM05D006972 ORTHO05D008519 7.2e-31 137.5 86 74.4
RcHm_v2.0_Chr5g0015201 Rosa chinensis HOM05D006972 ORTHO05D008519 1.6e-30 136.3 73 93.2
Lsat_1_v5_gn_1_125281 Lactuca sativa HOM05D006972 ORTHO05D008519 5.7e-20 101.3 76 71.1
SMO352G0055 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 2.9e-19 99.0 103 53.4
Mapoly0114s0024 Marchantia polymorpha HOM05D006972 ORTHO05D008519 3.7e-19 98.6 143 47.6
Lsat_1_v5_gn_8_30121 Lactuca sativa HOM05D006972 ORTHO05D008519 4.1e-18 95.1 61 75.4
CANSAT35G0485 Cannabis sativa HOM05D006972 ORTHO05D008519 3.5e-17 92.0 52 84.6
Sopen03g005970 Solanum pennellii HOM05D006972 ORTHO05D008519 6.6e-16 87.8 59 71.2
Cre16.g682050 Chlamydomonas reinhardtii HOM05D006972 ORTHO05D008519 8.6e-16 87.4 118 46.6
Glyma.11G085800 Glycine max HOM05D006972 ORTHO05D008519 3.6e-14 82.0 100 51.0
unitig_747.g21812 Utricularia gibba HOM05D006972 ORTHO05D008519 4.7e-14 81.6 52 76.9
PRCOL_00004399 Prasinoderma coloniale HOM05D006972 ORTHO05D008519 3.4e-12 75.5 111 45.0
SMO147G0393 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 1.1e-10 70.5 95 36.8
MCO16G109 Micromonas commoda HOM05D006972 ORTHO05D008519 3.2e-10 68.9 130 38.5
CBR_g19759 Chara braunii HOM05D006972 ORTHO05D008519 1.2e-09 67.0 100 44.0
Actinidia22899 Actinidia chinensis HOM05D006972 ORTHO05D008519 2.7e-09 65.9 36 86.1
Mapoly0023s0154 Marchantia polymorpha HOM05D006972 ORTHO05D008519 1.7e-08 63.2 105 35.2
Pp3c7_7150 Physcomitrium patens HOM05D006972 ORTHO05D008519 1.6e-06 56.6 105 35.2
Lsat_1_v5_gn_3_12301 Lactuca sativa HOM05D035019 ORTHO05D008519 2.1e-06 56.2 33 75.8
Lsat_1_v5_gn_8_143201 Lactuca sativa HOM05D035019 ORTHO05D008519 2.1e-06 56.2 33 75.8
Pp3c11_19180 Physcomitrium patens HOM05D006972 ORTHO05D008519 2.8e-06 55.8 107 34.6


User provided reference genes

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