Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G2808 Fragaria x ananassa HOM05D002733 ORTHO05D003856 3.7e-85 318.2 158 100.0
FAN19G2118 Fragaria x ananassa HOM05D002733 ORTHO05D003856 3.1e-52 208.8 132 81.8
FvH4_1g16231 Fragaria vesca HOM05D002733 ORTHO05D003856 5.0e-50 201.4 136 78.7
FAN23G1485 Fragaria x ananassa HOM05D002733 ORTHO05D003856 2.1e-48 196.1 135 79.3
RcHm_v2.0_Chr7g0192641 Rosa chinensis HOM05D002733 ORTHO05D003856 5.2e-31 138.3 182 46.2
FvH4_5g06160 Fragaria vesca HOM05D002733 ORTHO05D003856 9.2e-28 127.5 157 47.8
FAN13G0375 Fragaria x ananassa HOM05D002733 ORTHO05D003856 9.2e-28 127.5 157 47.8
FAN18G0094 Fragaria x ananassa HOM05D002733 ORTHO05D003856 1.6e-27 126.7 157 47.8
FAN28G1642 Fragaria x ananassa HOM05D000949 ORTHO05D001276 6.6e-26 121.3 178 41.0
RcHm_v2.0_Chr2g0120751 Rosa chinensis HOM05D002733 ORTHO05D003856 8.6e-26 120.9 185 41.1
FvH4_1g24261 Fragaria vesca HOM05D002733 ORTHO05D003856 1.1e-25 120.6 166 42.8
FAN26G1179 Fragaria x ananassa HOM05D002733 ORTHO05D003856 1.2e-24 117.1 160 43.1
FAN23G1126 Fragaria x ananassa HOM05D002733 ORTHO05D003856 7.5e-22 107.8 107 55.1
Prupe.7G223900 Prunus persica HOM05D002733 ORTHO05D003856 3.0e-18 95.9 80 56.2
MD02G1059300 Malus domestica HOM05D002733 ORTHO05D003856 8.6e-18 94.4 81 53.1
MD15G1316300 Malus domestica HOM05D002733 ORTHO05D003856 8.6e-18 94.4 87 54.0
Prupe.7G223800 Prunus persica HOM05D002733 ORTHO05D003856 1.5e-17 93.6 81 55.6
MD00G1107900 Malus domestica HOM05D002733 ORTHO05D003856 3.3e-17 92.4 78 56.4
FAN19G0693 Fragaria x ananassa HOM05D002733 ORTHO05D003856 4.7e-16 88.6 130 40.8
Duzib213G0038 Durio zibethinus HOM05D002733 ORTHO05D003856 1.7e-13 80.1 88 44.3
Duzib213G1035 Durio zibethinus HOM05D002733 ORTHO05D003856 2.2e-13 79.7 72 50.0
Thecc.07G171000 Theobroma cacao HOM05D002733 ORTHO05D003856 4.9e-13 78.6 70 52.9
Potri.001G397100 Populus trichocarpa HOM05D002733 ORTHO05D003856 6.4e-13 78.2 72 51.4
Sabra16G0260100 Salix brachista HOM05D002733 ORTHO05D003856 6.4e-13 78.2 71 52.1
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 8.3e-13 77.8 91 44.0
Cpa.g.sc81.85 Carica papaya HOM05D002733 ORTHO05D003856 1.1e-12 77.4 70 51.4
Cfa009897 Carpinus fangiana HOM05D002733 ORTHO05D003856 1.4e-12 77.0 71 53.5
Prupe.7G224000 Prunus persica HOM05D002733 ORTHO05D003856 2.4e-12 76.3 155 34.2
CiPaw.03G014800 Carya illinoinensis HOM05D002733 ORTHO05D003856 9.2e-12 74.3 88 42.0
Manes.03G176200 Manihot esculenta HOM05D002733 ORTHO05D003856 1.6e-11 73.6 157 33.8
CiPaw.03G015000 Carya illinoinensis HOM05D002733 ORTHO05D003856 2.1e-11 73.2 135 37.0
Manes.03G176000 Manihot esculenta HOM05D002733 ORTHO05D003856 2.7e-11 72.8 83 48.2
Sabra08G0161200 Salix brachista HOM05D002733 ORTHO05D003856 3.5e-11 72.4 72 48.6
CiPaw.03G014700 Carya illinoinensis HOM05D002733 ORTHO05D003856 4.6e-11 72.0 71 49.3
Thecc.09G104200 Theobroma cacao HOM05D002733 ORTHO05D003856 1.0e-10 70.9 71 49.3
QL02p042807 Quercus lobata HOM05D002733 ORTHO05D003856 2.3e-10 69.7 68 50.0
QL02p042555 Quercus lobata HOM05D002733 ORTHO05D003856 3.9e-10 68.9 68 50.0
Sed0022151 Sechium edule HOM05D002733 ORTHO05D003856 3.9e-10 68.9 77 45.5
CiPaw.03G015300 Carya illinoinensis HOM05D002733 ORTHO05D003856 6.6e-10 68.2 71 47.9
Prupe.7G224100 Prunus persica HOM05D002733 ORTHO05D003856 1.5e-09 67.0 105 40.0
Duzib168G2229 Durio zibethinus HOM05D002733 ORTHO05D003856 4.3e-09 65.5 71 46.5
CsaV3_3G004840 Cucumis sativus L. HOM05D002733 ORTHO05D003856 7.3e-09 64.7 65 47.7
Peaxi162Scf00023g00136 Petunia axillaris HOM05D002733 ORTHO05D003856 7.3e-09 64.7 130 34.6
Solyc12g007300.1 Solanum lycopersicum HOM05D002733 ORTHO05D003856 9.5e-09 64.3 84 46.4
Sopen12g003260 Solanum pennellii HOM05D002733 ORTHO05D003856 9.5e-09 64.3 84 46.4
Lj3g0006952 Lotus japonicus HOM05D002733 ORTHO05D003856 1.2e-08 63.9 69 46.4
PGSC0003DMG400000368 Solanum tuberosum HOM05D002733 ORTHO05D003856 2.1e-08 63.2 84 45.2
Gohir.D06G064250 Gossypium hirsutum HOM05D002733 ORTHO05D003856 2.8e-08 62.8 69 44.9
Gorai.010G075000 Gossypium raimondii HOM05D002733 ORTHO05D003856 2.8e-08 62.8 69 44.9
Nitab4.5_0001888g0040 Nicotiana tabacum HOM05D002733 ORTHO05D003856 2.8e-08 62.8 66 43.9
COL.COLO4_34789 Corchorus olitorius HOM05D002733 ORTHO05D003856 3.6e-08 62.4 68 48.5
Nitab4.5_0000316g0140 Nicotiana tabacum HOM05D002733 ORTHO05D003856 3.6e-08 62.4 66 43.9
Cfa016245 Carpinus fangiana HOM05D002733 ORTHO05D003856 4.7e-08 62.0 76 44.7
Ciclev10010395m.g Citrus clementina HOM05D002733 ORTHO05D003856 4.7e-08 62.0 74 43.2
Cfa016244 Carpinus fangiana HOM05D002733 ORTHO05D003856 6.2e-08 61.6 74 41.9
CiPaw.03G015100 Carya illinoinensis HOM05D002733 ORTHO05D003856 6.2e-08 61.6 65 47.7
Haze_00196 Corylus avellana HOM05D002733 ORTHO05D003856 8.1e-08 61.2 70 45.7
MELO3C004101.2 Cucumis melo HOM05D002733 ORTHO05D003856 8.1e-08 61.2 65 46.2
DCAR_028226 Daucus carota HOM05D002733 ORTHO05D003856 1.1e-07 60.8 66 43.9
Gohir.A06G065650 Gossypium hirsutum HOM05D002733 ORTHO05D003856 1.1e-07 60.8 69 43.5
CSS0001293 Camellia sinensis var. sinensis HOM05D002733 ORTHO05D003856 2.3e-07 59.7 65 46.2
Peaxi162Scf00665g00126 Petunia axillaris HOM05D002733 ORTHO05D003856 2.3e-07 59.7 64 50.0
Hma1.2p1_1080F.1_g255020 Hydrangea macrophylla HOM05D002733 ORTHO05D003856 4.0e-07 58.9 95 38.9
Lj1g0000886 Lotus japonicus HOM05D002733 ORTHO05D003856 5.2e-07 58.5 67 38.8
Phvul.005G031300 Phaseolus vulgaris HOM05D002733 ORTHO05D003856 8.9e-07 57.8 101 32.7
TPR.G1412 Trifolium pratense HOM05D002733 ORTHO05D003856 8.9e-07 57.8 73 42.5
TPR.G22027 Trifolium pratense HOM05D002733 ORTHO05D003856 1.2e-06 57.4 72 40.3
Peaxi162Scf00665g00148 Petunia axillaris HOM05D002733 ORTHO05D003856 2.0e-06 56.6 68 47.1
TPR.G1447 Trifolium pratense HOM05D002733 ORTHO05D003856 2.6e-06 56.2 70 44.3
CAN.G1774.3 Capsicum annuum HOM05D002733 ORTHO05D003856 3.4e-06 55.8 66 47.0


User provided reference genes

Program Settings