Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G2801 Fragaria x ananassa HOM05D004470 ORTHO05D005079 3.1e-122 441.8 221 100.0
FAN26G0538 Fragaria x ananassa HOM05D004470 ORTHO05D005079 9.6e-108 393.7 203 97.5
FAN02G2550 Fragaria x ananassa HOM05D004470 ORTHO05D005079 2.2e-35 153.3 97 85.6
FAN14G0179 Fragaria x ananassa HOM05D004470 ORTHO05D005079 2.2e-35 153.3 97 85.6
FAN09G3660 Fragaria x ananassa HOM05D004470 ORTHO05D005079 6.4e-35 151.8 97 84.5
FAN05G2322 Fragaria x ananassa HOM05D004470 ORTHO05D005079 3.2e-34 149.4 97 83.5
RcHm_v2.0_Chr2g0139741 Rosa chinensis HOM05D004470 ORTHO05D005079 2.0e-33 146.7 97 81.4
Prupe.3G062500 Prunus persica HOM05D004470 ORTHO05D005079 2.2e-27 126.7 99 69.7
Prupe.2G047800 Prunus persica HOM05D004470 ORTHO05D005079 3.7e-27 125.9 97 71.1
MD10G1090000 Malus domestica HOM05D004470 ORTHO05D005079 4.9e-27 125.6 97 68.0
Dinv30905 Davidia involucrata HOM05D004470 ORTHO05D005079 1.3e-24 117.5 121 57.9
QL03p015399 Quercus lobata HOM05D004470 ORTHO05D005079 1.7e-24 117.1 92 68.5
Hma1.2p1_0052F.1_g030690 Hydrangea macrophylla HOM05D004470 ORTHO05D005079 3.0e-24 116.3 98 63.3
CiPaw.08G154600 Carya illinoinensis HOM05D004470 ORTHO05D005079 3.9e-24 115.9 92 66.3
PGSC0003DMG400002761 Solanum tuberosum HOM05D004470 ORTHO05D005079 3.9e-24 115.9 100 63.0
Sabra05G0020100 Salix brachista HOM05D004470 ORTHO05D005079 5.0e-24 115.5 102 64.7
CANSAT56G4147 Cannabis sativa HOM05D004470 ORTHO05D005079 6.6e-24 115.2 107 60.7
TWI36G1558 Tripterygium wilfordii HOM05D004470 ORTHO05D005079 6.6e-24 115.2 94 67.0
MD07G1055000 Malus domestica HOM05D004470 ORTHO05D005079 8.6e-24 114.8 90 68.9
Potri.005G011800 Populus trichocarpa HOM05D004470 ORTHO05D005079 8.6e-24 114.8 102 64.7
Sopen01g044200 Solanum pennellii HOM05D004470 ORTHO05D005079 8.6e-24 114.8 100 62.0
GSVIVG01031257001 Vitis vinifera HOM05D004470 ORTHO05D005079 8.6e-24 114.8 99 64.6
CANSAT54G2827 Cannabis sativa HOM05D004470 ORTHO05D005079 1.1e-23 114.4 106 59.4
MELO3C015252.2 Cucumis melo HOM05D004470 ORTHO05D005079 1.5e-23 114.0 92 67.4
Sed0027904 Sechium edule HOM05D004470 ORTHO05D005079 1.5e-23 114.0 94 66.0
Nitab4.5_0001338g0040 Nicotiana tabacum HOM05D004470 ORTHO05D005079 1.9e-23 113.6 101 60.4
Nitab4.5_0010074g0010 Nicotiana tabacum HOM05D004470 ORTHO05D005079 1.9e-23 113.6 101 60.4
TAR362G0763 Trochodendron aralioides HOM05D004470 ORTHO05D005079 1.9e-23 113.6 106 57.5
Haze_04037 Corylus avellana HOM05D004470 ORTHO05D005079 2.5e-23 113.2 92 65.2
Sabra13G0006500 Salix brachista HOM05D004470 ORTHO05D005079 2.5e-23 113.2 112 58.9
CSS0034232 Camellia sinensis var. sinensis HOM05D004470 ORTHO05D005079 3.3e-23 112.8 87 67.8
MSTRG.5145 Avicennia marina HOM05D004470 ORTHO05D005079 5.6e-23 112.1 120 53.3
Peaxi162Scf00357g00829 Petunia axillaris HOM05D004470 ORTHO05D005079 5.6e-23 112.1 101 60.4
Actinidia35512 Actinidia chinensis HOM05D004470 ORTHO05D005079 7.3e-23 111.7 87 66.7
CAN.G1076.31 Capsicum annuum HOM05D004470 ORTHO05D005079 7.3e-23 111.7 110 57.3
Hma1.2p1_0008F-1.1_g005470 Hydrangea macrophylla HOM05D004470 ORTHO05D005079 9.5e-23 111.3 100 60.0
CsaV3_1G037920 Cucumis sativus L. HOM05D004470 ORTHO05D005079 1.2e-22 110.9 92 66.3
TWI63G0379 Tripterygium wilfordii HOM05D004470 ORTHO05D005079 1.2e-22 110.9 94 66.0
Potri.013G007600 Populus trichocarpa HOM05D004470 ORTHO05D005079 2.1e-22 110.2 112 58.0
COL.COLO4_05537 Corchorus olitorius HOM05D004470 ORTHO05D005079 4.7e-22 109.0 87 65.5
PSO339G4842 Papaver somniferum HOM05D004470 ORTHO05D005079 4.7e-22 109.0 94 62.8
CiPaw.07G030800 Carya illinoinensis HOM05D004470 ORTHO05D005079 6.2e-22 108.6 92 63.0
Gohir.A08G205100 Gossypium hirsutum HOM05D004470 ORTHO05D005079 6.2e-22 108.6 87 64.4
Gohir.D08G222200 Gossypium hirsutum HOM05D004470 ORTHO05D005079 6.2e-22 108.6 87 64.4
Gorai.004G236000 Gossypium raimondii HOM05D004470 ORTHO05D005079 6.2e-22 108.6 87 64.4
Cfa006723 Carpinus fangiana HOM05D004470 ORTHO05D005079 8.1e-22 108.2 99 62.6
Cc02_g35220 Coffea canephora HOM05D004470 ORTHO05D005079 8.1e-22 108.2 87 65.5
Atru.chr1.2932 Acer truncatum HOM05D004470 ORTHO05D005079 1.1e-21 107.8 84 70.2
TPR.G34849 Trifolium pratense HOM05D004470 ORTHO05D005079 1.4e-21 107.5 90 65.6
FvH4_6g32060 Fragaria vesca HOM05D004470 ORTHO05D005079 1.8e-21 107.1 74 82.4
Nn3g21765 Nelumbo nucifera HOM05D004470 ORTHO05D005079 2.3e-21 106.7 92 62.0
SGA_v2.0_scaffold37G14596 Striga asiatica HOM05D004470 ORTHO05D005079 2.3e-21 106.7 90 62.2
TPR.G29395 Trifolium pratense HOM05D004470 ORTHO05D005079 2.3e-21 106.7 106 56.6
TWI34G1281 Tripterygium wilfordii HOM05D004470 ORTHO05D005079 2.3e-21 106.7 93 63.4
Duzib128G0232 Durio zibethinus HOM05D004470 ORTHO05D005079 3.1e-21 106.3 90 62.2
Medtr2g023920 Medicago truncatula HOM05D004470 ORTHO05D005079 3.1e-21 106.3 85 67.1
PSO513G0108 Papaver somniferum HOM05D004470 ORTHO05D005079 4.0e-21 105.9 94 60.6
SalBow5G0245 Salvia bowleyana HOM05D004470 ORTHO05D005079 4.0e-21 105.9 109 54.1
Thecc.05G324600 Theobroma cacao HOM05D004470 ORTHO05D005079 4.0e-21 105.9 87 63.2
Lj6g0017458 Lotus japonicus HOM05D004470 ORTHO05D005079 5.2e-21 105.5 83 68.7
arahy.Tifrunner.gnm1.ann1.IGN13F Arachis hypogaea HOM05D004470 ORTHO05D005079 6.8e-21 105.1 106 57.5
Migut.N00943 Erythranthe guttata HOM05D004470 ORTHO05D005079 6.8e-21 105.1 90 60.0
Aqoxy2G02663 Aquilegia oxysepala HOM05D004470 ORTHO05D005079 8.9e-21 104.8 87 65.5
PSO675G4687 Papaver somniferum HOM05D004470 ORTHO05D005079 8.9e-21 104.8 82 69.5
arahy.Tifrunner.gnm1.ann1.3R4C35 Arachis hypogaea HOM05D004470 ORTHO05D005079 1.5e-20 104.0 107 57.0
CARHR186760 Cardamine hirsuta HOM05D004470 ORTHO05D005079 1.5e-20 104.0 103 57.3
Duzib106G0025 Durio zibethinus HOM05D004470 ORTHO05D005079 1.5e-20 104.0 102 57.8
Ah.06g196140 Amaranthus hybridus HOM05D004470 ORTHO05D005079 2.0e-20 103.6 96 59.4
arahy.Tifrunner.gnm1.ann1.44SN5D Arachis hypogaea HOM05D004470 ORTHO05D005079 2.6e-20 103.2 84 65.5
EL10Ac4g09488 Beta vulgaris HOM05D004470 ORTHO05D005079 3.4e-20 102.8 87 63.2
Glyma.10G146200 Glycine max HOM05D004470 ORTHO05D005079 3.4e-20 102.8 83 67.5
PSO541G1615 Papaver somniferum HOM05D004470 ORTHO05D005079 3.4e-20 102.8 88 67.0
Phvul.007G202300 Phaseolus vulgaris HOM05D004470 ORTHO05D005079 3.4e-20 102.8 97 61.9
Ah.16g100620 Amaranthus hybridus HOM05D004470 ORTHO05D005079 4.4e-20 102.4 96 58.3
C09p06260 Brassica napus HOM05D004470 ORTHO05D005079 4.4e-20 102.4 108 52.8
Glyma.20G096000 Glycine max HOM05D004470 ORTHO05D005079 4.4e-20 102.4 83 66.3
SGA_v2.0_scaffold5G02899 Striga asiatica HOM05D004470 ORTHO05D005079 4.4e-20 102.4 90 58.9
CDE02G2719 Ceratophyllum demersum HOM05D004470 ORTHO05D005079 5.8e-20 102.1 89 59.6
Manes.09G177800 Manihot esculenta HOM05D004470 ORTHO05D005079 5.8e-20 102.1 87 64.4
Oeu000058.1 Olea europaea HOM05D004470 ORTHO05D005079 5.8e-20 102.1 108 54.6
Ciclev10002908m.g Citrus clementina HOM05D004470 ORTHO05D005079 7.5e-20 101.7 91 62.6
FAN28G0201 Fragaria x ananassa HOM05D004470 ORTHO05D005079 9.8e-20 101.3 54 92.6
Manes.08G110300 Manihot esculenta HOM05D004470 ORTHO05D005079 9.8e-20 101.3 94 60.6
Eucgr.A00650 Eucalyptus grandis HOM05D004470 ORTHO05D005079 1.3e-19 100.9 84 64.3
BcaB04g19711 Brassica carinata HOM05D004470 ORTHO05D005079 1.7e-19 100.5 108 51.9
BcaC04g23637 Brassica carinata HOM05D004470 ORTHO05D005079 1.7e-19 100.5 108 51.9
BolC9t53546H Brassica oleracea HOM05D004470 ORTHO05D005079 1.7e-19 100.5 108 51.9
CDE09G1304 Ceratophyllum demersum HOM05D004470 ORTHO05D005079 1.7e-19 100.5 89 58.4
PGR031G2302 Punica granatum HOM05D004470 ORTHO05D005079 1.7e-19 100.5 85 63.5
AUR62006764 Chenopodium quinoa HOM05D004470 ORTHO05D005079 2.2e-19 100.1 87 63.2
Psat1g179040 Pisum sativum HOM05D004470 ORTHO05D005079 2.9e-19 99.8 90 60.0
AL6G38670 Arabidopsis lyrata HOM05D004470 ORTHO05D005079 3.7e-19 99.4 109 55.0
A09p05650 Brassica napus HOM05D004470 ORTHO05D005079 3.7e-19 99.4 108 51.9
BraA09t36207Z Brassica rapa HOM05D004470 ORTHO05D005079 3.7e-19 99.4 108 51.9
Carub.0003s0517 Capsella rubella HOM05D004470 ORTHO05D005079 3.7e-19 99.4 90 62.2
Lalb_Chr02g0147721 Lupinus albus HOM05D004470 ORTHO05D005079 3.7e-19 99.4 105 53.3
BcaNung03672 Brassica carinata HOM05D004470 ORTHO05D005079 4.9e-19 99.0 92 59.8
Thhalv10021798m.g Eutrema salsugineum HOM05D004470 ORTHO05D005079 4.9e-19 99.0 85 63.5
Nitab4.5_0001255g0050 Nicotiana tabacum HOM05D004470 ORTHO05D005079 6.4e-19 98.6 129 47.3
ATR0693G181 Amborella trichopoda HOM05D004470 ORTHO05D005079 8.3e-19 98.2 91 62.6
Carub.0006s2445 Capsella rubella HOM05D004470 ORTHO05D005079 8.3e-19 98.2 103 55.3
Ca_10181_v3 Cicer arietinum L. HOM05D004470 ORTHO05D005079 8.3e-19 98.2 101 55.4
ClCG03G017770 Citrullus lanatus HOM05D004470 ORTHO05D005079 8.3e-19 98.2 126 49.2
Eucgr.H03299 Eucalyptus grandis HOM05D004470 ORTHO05D005079 8.3e-19 98.2 86 61.6
BcaNung03915 Brassica carinata HOM05D004470 ORTHO05D005079 1.1e-18 97.8 108 51.9
BraA06t26628Z Brassica rapa HOM05D004470 ORTHO05D005079 1.1e-18 97.8 108 51.9
AL3G16550 Arabidopsis lyrata HOM05D004470 ORTHO05D005079 1.4e-18 97.4 90 61.1
A06p37040 Brassica napus HOM05D004470 ORTHO05D005079 1.4e-18 97.4 92 58.7
AT3G05810 Arabidopsis thaliana HOM05D004470 ORTHO05D005079 1.9e-18 97.1 91 62.6
Sp2g21200 Schrenkiella parvula HOM05D004470 ORTHO05D005079 2.4e-18 96.7 92 57.6
Sabra05G0008600 Salix brachista HOM05D004470 ORTHO05D005079 3.2e-18 96.3 143 46.2
Hund07308 Selenicereus undatus HOM05D004470 ORTHO05D005079 4.1e-18 95.9 83 63.9
BolC7t44679H Brassica oleracea HOM05D004470 ORTHO05D005079 5.4e-18 95.5 92 58.7
CARHR080260 Cardamine hirsuta HOM05D004470 ORTHO05D005079 5.4e-18 95.5 90 60.0
Sc16g0009110 Simmondsia chinensis HOM05D004470 ORTHO05D005079 5.4e-18 95.5 123 45.5
DCAR_025290 Daucus carota HOM05D004470 ORTHO05D005079 9.2e-18 94.7 84 61.9
Sp3g04670 Schrenkiella parvula HOM05D004470 ORTHO05D005079 1.2e-17 94.4 90 60.0
Lsat_1_v5_gn_2_67201 Lactuca sativa HOM05D004470 ORTHO05D005079 1.6e-17 94.0 100 52.0
Aa31LG5G16190 Aethionema arabicum HOM05D004470 ORTHO05D005079 2.7e-17 93.2 103 57.3
THA.LOC104802774 Tarenaya hassleriana HOM05D004470 ORTHO05D005079 3.9e-16 89.4 106 51.9
HPP92_027934 Vanilla planifolia HOM05D004470 ORTHO05D005079 3.9e-16 89.4 90 54.4
ECA238G3981 Erigeron canadensis HOM05D004470 ORTHO05D005079 5.1e-16 89.0 91 54.9
THA.LOC104821881 Tarenaya hassleriana HOM05D004470 ORTHO05D005079 5.1e-16 89.0 92 56.5
HPP92_002708 Vanilla planifolia HOM05D004470 ORTHO05D005079 1.1e-15 87.8 75 58.7
Hund21865 Selenicereus undatus HOM05D004470 ORTHO05D005079 2.5e-15 86.7 76 63.2
HPP92_002665 Vanilla planifolia HOM05D004470 ORTHO05D005079 4.3e-15 85.9 90 53.3
Zm00001eb340410 Zea mays HOM05D004470 ORTHO05D005079 4.3e-15 85.9 87 56.3
Zm00001eb130040 Zea mays HOM05D004470 ORTHO05D005079 5.6e-15 85.5 82 56.1
Os01g0299400 Oryza sativa ssp. japonica HOM05D004470 ORTHO05D005079 7.3e-15 85.1 80 57.5
HanXRQChr14g0445721 Helianthus annuus HOM05D004470 ORTHO05D005079 1.2e-14 84.3 94 52.1
MBI18_g35544_MAGBIO Magnolia biondii HOM05D004470 ORTHO05D005079 1.2e-14 84.3 107 51.4
Nn4g25533 Nelumbo nucifera HOM05D004470 ORTHO05D005079 2.1e-14 83.6 128 43.8
Os10g0150200 Oryza sativa ssp. japonica HOM05D004470 ORTHO05D005079 2.1e-14 83.6 75 58.7
MD15G1427600 Malus domestica HOM05D004470 ORTHO05D005079 1.8e-13 80.5 76 59.2
Lju926A3T37 Lonicera japonica HOM05D004470 ORTHO05D005079 2.3e-13 80.1 76 59.2
vmacro01577 Vaccinium macrocarpon HOM05D004470 ORTHO05D005079 5.2e-13 79.0 53 75.5
Rhsim11G0097400 Rhododendron simsii HOM05D004470 ORTHO05D005079 1.5e-12 77.4 53 73.6
Thhalv10026672m.g Eutrema salsugineum HOM05D004470 ORTHO05D005079 5.8e-12 75.5 72 61.1
C02p58610 Brassica napus HOM05D004470 ORTHO05D005079 1.1e-10 71.2 66 59.1
VMungo0720G0966 Vigna mungo HOM05D004470 ORTHO05D005079 1.4e-10 70.9 50 72.0
BcaC03g17832 Brassica carinata HOM05D004470 ORTHO05D005079 2.4e-10 70.1 62 61.3
BcaNung06220 Brassica carinata HOM05D004470 ORTHO05D005079 2.4e-10 70.1 62 61.3
AUR62000416 Chenopodium quinoa HOM05D004470 ORTHO05D005079 1.2e-09 67.8 74 54.1
Sc18g0006160 Simmondsia chinensis HOM05D004470 ORTHO05D005079 2.7e-09 66.6 56 62.5
DCAR_002036 Daucus carota HOM05D004470 ORTHO05D005079 1.0e-08 64.7 65 56.9
AagrBONN_evm.TU.Sc2ySwM_228.963 Anthoceros agrestis HOM05D004470 ORTHO05D005079 1.3e-08 64.3 68 47.1
unitig_37.g12917 Utricularia gibba HOM05D004470 ORTHO05D005079 1.7e-08 63.9 53 60.4
HanXRQChr15g0471581 Helianthus annuus HOM05D004470 ORTHO05D005079 2.3e-08 63.5 54 59.3
Aa31LG1G17020 Aethionema arabicum HOM05D004470 ORTHO05D005079 8.6e-08 61.6 56 58.9
Mapoly0164s0021 Marchantia polymorpha HOM05D004470 ORTHO05D005079 1.5e-07 60.8 70 47.1
Eucgr.H03248 Eucalyptus grandis HOM05D004470 ORTHO05D005079 2.1e-06 57.0 65 52.3
Pp3c6_8090 Physcomitrium patens HOM05D004470 ORTHO05D005079 6.2e-06 55.5 68 47.1


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