Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 2.2e-160 568.9 288 100.0
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 8.3e-160 567.0 288 99.7
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.8e-159 565.8 288 99.3
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 1.3e-152 543.1 289 97.2
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 9.8e-137 490.3 298 87.6
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 1.1e-116 423.7 225 96.4
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 3.5e-110 402.1 306 71.6
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 2.5e-108 396.0 309 71.2
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 3.0e-101 372.5 287 70.0
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 3.3e-100 369.0 293 67.6
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 5.6e-100 368.2 268 71.3
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 7.4e-100 367.9 263 71.9
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 9.6e-100 367.5 295 66.1
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 9.6e-100 367.5 281 70.1
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 1.6e-99 366.7 298 68.8
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 2.8e-99 365.9 259 73.4
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 3.6e-99 365.5 223 79.4
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 3.6e-99 365.5 298 67.1
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.1e-98 364.0 238 76.9
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.4e-98 363.6 265 70.2
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 1.4e-98 363.6 281 70.1
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 2.4e-98 362.8 293 66.2
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 2.4e-98 362.8 298 66.1
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 2.4e-98 362.8 291 68.0
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 2.4e-98 362.8 259 71.4
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 3.1e-98 362.5 290 68.6
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 4.0e-98 362.1 261 72.4
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 5.3e-98 361.7 259 71.4
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 6.9e-98 361.3 259 73.0
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 6.9e-98 361.3 273 69.2
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.5e-97 360.1 285 67.4
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 1.5e-97 360.1 252 72.6
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 2.0e-97 359.8 291 66.3
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 2.0e-97 359.8 269 70.3
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 2.0e-97 359.8 294 65.3
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 2.0e-97 359.8 234 77.4
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 2.6e-97 359.4 292 67.1
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 2.6e-97 359.4 279 67.4
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 2.6e-97 359.4 291 66.0
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 4.5e-97 358.6 317 62.8
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 4.5e-97 358.6 249 73.5
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 7.6e-97 357.8 291 67.0
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 9.9e-97 357.5 262 70.6
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 9.9e-97 357.5 249 73.1
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 1.7e-96 356.7 298 68.5
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.7e-96 356.7 291 67.7
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 1.7e-96 356.7 249 73.1
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 2.2e-96 356.3 282 67.4
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 2.9e-96 355.9 266 70.3
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 2.9e-96 355.9 287 65.2
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 3.8e-96 355.5 336 61.0
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 3.8e-96 355.5 295 65.4
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 3.8e-96 355.5 263 70.7
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 4.9e-96 355.1 214 81.3
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 6.4e-96 354.8 279 67.0
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 8.4e-96 354.4 278 68.7
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 1.1e-95 354.0 265 70.9
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 1.4e-95 353.6 288 66.0
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 1.9e-95 353.2 281 66.2
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 4.2e-95 352.1 289 65.7
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 5.5e-95 351.7 233 74.7
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 9.3e-95 350.9 272 69.9
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 9.3e-95 350.9 241 73.9
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 9.3e-95 350.9 228 76.8
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 1.2e-94 350.5 230 74.8
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 2.1e-94 349.7 261 69.3
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 3.5e-94 349.0 271 67.5
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 3.5e-94 349.0 292 65.8
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 7.9e-94 347.8 230 76.5
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 7.9e-94 347.8 231 76.2
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 1.3e-93 347.1 228 75.0
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 3.0e-93 345.9 294 62.9
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 3.0e-93 345.9 294 62.9
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 3.9e-93 345.5 229 75.5
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 5.1e-93 345.1 289 63.3
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 6.7e-93 344.7 273 67.4
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 2.5e-92 342.8 298 61.7
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 3.3e-92 342.4 296 61.5
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 5.6e-92 341.7 288 63.2
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 7.4e-92 341.3 301 60.5
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 7.4e-92 341.3 294 61.6
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 7.4e-92 341.3 307 61.6
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 1.3e-91 340.5 300 62.0
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 1.6e-91 340.1 303 60.7
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 1.6e-91 340.1 303 60.7
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 1.6e-91 340.1 242 71.5
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 2.8e-91 339.3 213 78.4
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 2.8e-91 339.3 264 65.9
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 3.7e-91 339.0 299 61.9
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 3.7e-91 339.0 244 72.1
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 6.2e-91 338.2 263 68.4
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 1.8e-90 336.7 264 67.8
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 1.5e-89 333.6 377 52.8
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 4.5e-89 332.0 263 65.0
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 1.4e-87 327.0 262 64.5
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 4.6e-86 322.0 325 56.3
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 4.6e-86 322.0 270 65.9
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 3.4e-81 305.8 230 67.0
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 8.5e-80 301.2 271 60.9
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 3.3e-76 289.3 280 57.5
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 8.5e-72 274.6 196 70.9
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 4.6e-70 268.9 247 56.7
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 4.6e-70 268.9 244 62.3
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 3.9e-69 265.8 209 60.8
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 9.1e-66 254.6 217 65.0
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 2.0e-65 253.4 204 60.8
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 1.9e-63 246.9 203 59.1
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 7.9e-62 241.5 175 69.7
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 4.9e-35 152.5 242 41.7
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 1.6e-33 147.5 191 40.8
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 7.8e-33 145.2 172 44.2
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 5.0e-32 142.5 180 48.9
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 1.4e-29 134.4 162 44.4
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 5.2e-29 132.5 95 71.6
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 7.0e-26 122.1 151 45.0
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 2.7e-25 120.2 94 67.0
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 1.7e-24 117.5 77 72.7
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 1.5e-07 61.2 119 33.6


User provided reference genes

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