Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G2655 Fragaria x ananassa HOM05D005638 ORTHO05D006913 3.0e-102 375.2 190 100.0
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.1e-24 117.5 69 87.0
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 1.5e-24 117.1 68 88.2
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.5e-24 117.1 68 88.2
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.5e-24 117.1 68 88.2
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.5e-24 117.1 66 89.4
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 1.1e-22 110.9 68 82.4
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 4.1e-22 109.0 72 80.6
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 3.4e-21 105.9 65 73.8
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 5.9e-21 105.1 65 72.3
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 5.9e-21 105.1 65 75.4
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 7.7e-21 104.8 65 75.4
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 1.0e-20 104.4 65 73.8
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 2.9e-20 102.8 65 70.8
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 2.9e-20 102.8 65 70.8
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 2.9e-20 102.8 65 70.8
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 2.9e-20 102.8 65 72.3
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 5.0e-20 102.1 65 70.8
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 8.5e-20 101.3 65 72.3
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 1.1e-19 100.9 65 70.8
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 1.1e-19 100.9 65 70.8
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 1.9e-19 100.1 65 69.2
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 2.5e-19 99.8 65 70.8
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 3.2e-19 99.4 65 75.4
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 4.2e-19 99.0 65 69.2
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 4.2e-19 99.0 65 69.2
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 4.2e-19 99.0 65 70.8
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 7.2e-19 98.2 65 69.2
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 7.2e-19 98.2 65 69.2
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 7.2e-19 98.2 65 69.2
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 7.2e-19 98.2 65 67.7
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 7.2e-19 98.2 65 67.7
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 1.2e-18 97.4 72 62.5
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 1.2e-18 97.4 65 70.8
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 1.6e-18 97.1 65 69.2
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 1.6e-18 97.1 65 72.3
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 1.6e-18 97.1 65 72.3
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 1.6e-18 97.1 65 72.3
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 1.6e-18 97.1 65 67.7
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 1.6e-18 97.1 81 56.8
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 1.6e-18 97.1 73 65.8
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 2.7e-18 96.3 65 70.8
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 2.7e-18 96.3 68 69.1
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 3.6e-18 95.9 65 70.8
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 4.6e-18 95.5 65 70.8
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 4.6e-18 95.5 65 70.8
TPR.G7417 Trifolium pratense HOM05D005638 ORTHO05D006913 4.6e-18 95.5 67 70.1
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 7.9e-18 94.7 65 66.2
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 7.9e-18 94.7 66 66.7
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 7.9e-18 94.7 65 70.8
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 1.0e-17 94.4 65 70.8
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 1.0e-17 94.4 65 69.2
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 1.0e-17 94.4 65 70.8
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 1.0e-17 94.4 65 69.2
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 1.4e-17 94.0 65 64.6
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 1.4e-17 94.0 65 64.6
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 1.8e-17 93.6 65 66.2
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 2.3e-17 93.2 65 64.6
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 3.0e-17 92.8 65 66.2
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 3.0e-17 92.8 65 64.6
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 3.9e-17 92.4 65 72.3
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 3.9e-17 92.4 65 72.3
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 3.9e-17 92.4 65 70.8
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 3.9e-17 92.4 65 70.8
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 3.9e-17 92.4 65 70.8
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 3.9e-17 92.4 65 64.6
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 3.9e-17 92.4 65 64.6
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 3.9e-17 92.4 65 64.6
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 5.1e-17 92.0 65 70.8
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 5.1e-17 92.0 65 70.8
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 5.1e-17 92.0 68 60.3
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 6.7e-17 91.7 65 64.6
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 6.7e-17 91.7 65 64.6
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 6.7e-17 91.7 65 70.8
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 8.8e-17 91.3 65 69.2
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 1.5e-16 90.5 65 63.1
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 2.0e-16 90.1 64 65.6
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 2.0e-16 90.1 65 67.7
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 2.5e-16 89.7 87 56.3
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 2.5e-16 89.7 65 67.7
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 4.3e-16 89.0 99 47.5
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 4.3e-16 89.0 66 60.6
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 7.4e-16 88.2 65 64.6
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 7.4e-16 88.2 98 53.1
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 9.7e-16 87.8 65 64.6
Rhsim11G0032000 Rhododendron simsii HOM05D005638 ORTHO05D006913 9.7e-16 87.8 74 58.1
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 9.7e-16 87.8 65 60.0
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 1.3e-15 87.4 65 61.5
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 1.3e-15 87.4 65 64.6
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 1.3e-15 87.4 65 64.6
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 3.7e-15 85.9 65 61.5
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 4.8e-15 85.5 65 61.5
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 4.8e-15 85.5 65 66.2
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 6.3e-15 85.1 65 61.5
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 1.4e-14 84.0 65 56.9
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 1.8e-14 83.6 65 58.5
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 6.9e-14 81.6 65 55.4
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 1.3e-12 77.4 65 50.8
SEGI_29357 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 1.7e-12 77.0 66 51.5
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 2.2e-12 76.6 65 52.3
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 1.4e-11 73.9 49 73.5
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 1.9e-11 73.6 55 60.0
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 6.1e-10 68.6 49 65.3
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 2.3e-09 66.6 66 47.0
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 3.9e-09 65.9 110 35.5
Rhsim09G0101700 Rhododendron simsii HOM05D005638 ORTHO05D006913 3.9e-09 65.9 59 54.2
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 5.1e-09 65.5 49 61.2
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 1.1e-08 64.3 69 40.6
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 1.3e-07 60.8 113 36.3
MCO02G007 Micromonas commoda HOM05D005638 ORTHO05D006913 1.8e-06 57.0 66 39.4
FvH4_2g00150 Fragaria vesca HOM05D008315 ORTHO05D009452 3.1e-06 56.2 31 83.9
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 5.3e-06 55.5 72 40.3


User provided reference genes

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