Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 1.2e-155 553.1 285 100.0
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 1.4e-151 539.7 285 97.9
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 7.4e-145 517.3 285 92.6
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 5.3e-127 458.0 292 82.9
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 2.1e-107 392.9 277 73.3
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 2.3e-106 389.4 284 73.2
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 3.7e-88 328.9 277 62.5
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 3.3e-84 315.8 276 63.8
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 4.3e-84 315.5 285 63.2
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 5.6e-84 315.1 284 59.9
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 1.6e-83 313.5 282 58.2
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 1.4e-82 310.5 284 58.5
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 2.4e-82 309.7 276 62.7
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 3.1e-82 309.3 272 61.4
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 3.1e-82 309.3 278 60.8
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 4.0e-82 308.9 287 58.5
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 6.8e-82 308.1 272 59.6
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 1.5e-81 307.0 280 57.9
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 9.9e-81 304.3 278 59.0
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 9.9e-81 304.3 272 60.3
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 2.9e-80 302.8 277 59.9
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 3.8e-80 302.4 278 59.4
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 1.1e-79 300.8 276 58.3
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 1.4e-79 300.4 273 57.5
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 3.2e-79 299.3 277 57.0
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 4.2e-79 298.9 285 57.2
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 9.2e-79 297.7 276 57.2
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 1.6e-78 297.0 271 57.6
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 7.8e-78 294.7 276 57.2
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 1.0e-77 294.3 278 56.1
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 1.3e-77 293.9 285 55.8
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 1.7e-77 293.5 289 53.6
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 3.0e-77 292.7 271 57.9
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 6.6e-77 291.6 275 57.8
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 8.7e-77 291.2 278 55.8
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 1.9e-76 290.0 284 54.9
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 1.2e-75 287.3 288 54.9
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 3.6e-75 285.8 267 56.6
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 3.6e-75 285.8 277 54.9
THA.LOC104827422 Tarenaya hassleriana HOM05D008006 ORTHO05D010181 4.7e-75 285.4 273 56.4
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 1.8e-74 283.5 279 56.6
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 3.1e-74 282.7 280 56.8
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 1.2e-73 280.8 271 55.7
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 2.2e-72 276.6 269 55.4
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 6.4e-72 275.0 276 55.8
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 8.4e-72 274.6 265 55.5
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 8.4e-72 274.6 273 54.6
EL10Ac6g14724 Beta vulgaris HOM05D008006 ORTHO05D010181 2.1e-70 270.0 284 56.0
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 1.0e-69 267.7 271 53.5
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 3.9e-69 265.8 278 52.2
HPP92_022771 Vanilla planifolia HOM05D008006 ORTHO05D010181 5.1e-69 265.4 270 54.4
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 1.1e-68 264.2 280 53.2
Ah.07g202950 Amaranthus hybridus HOM05D008006 ORTHO05D010181 3.3e-68 262.7 283 55.1
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 6.2e-67 258.5 288 51.7
Zm00001eb102080 Zea mays HOM05D008006 ORTHO05D010181 5.8e-65 251.9 283 51.6
AUR62016258 Chenopodium quinoa HOM05D008006 ORTHO05D010181 1.1e-63 247.7 254 56.7
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 6.0e-62 241.9 291 51.9
SalBow5G3372 Salvia bowleyana HOM05D008006 ORTHO05D010181 7.4e-60 235.0 274 51.5
SEGI_07410 Sequoiadendron giganteum HOM05D008006 ORTHO05D010181 1.6e-59 233.8 274 50.0
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 4.0e-58 229.2 278 48.6
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 3.8e-56 222.6 218 56.9
FAN26G1902 Fragaria x ananassa HOM05D008006 ORTHO05D010181 6.4e-56 221.9 123 93.5
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 3.7e-51 206.1 201 55.7
Mapoly0054s0065 Marchantia polymorpha HOM05D008006 ORTHO05D010181 1.1e-47 194.5 278 45.0
HanXRQChr15g0486431 Helianthus annuus HOM05D008006 ORTHO05D010181 1.4e-47 194.1 159 57.2
AUR62003323 Chenopodium quinoa HOM05D002832 ORTHO05D007530 7.7e-41 171.8 134 61.2
Lalb_Chr11g0072821 Lupinus albus HOM05D008006 ORTHO05D010181 1.0e-40 171.4 117 70.9
SMO364G0826 Selaginella moellendorffii HOM05D008006 ORTHO05D010181 1.1e-34 151.4 186 49.5
FAN26G1226 Fragaria x ananassa HOM05D008006 ORTHO05D010181 5.7e-28 129.0 93 78.5
Solyc02g068350.1 Solanum lycopersicum HOM05D008006 ORTHO05D010181 1.8e-26 124.0 149 47.7
CBR_g4365 Chara braunii HOM05D008006 ORTHO05D010181 4.5e-25 119.4 311 30.9
AUR62043755 Chenopodium quinoa HOM05D008006 ORTHO05D010181 3.9e-21 106.3 80 65.0
Cre16.g675000 Chlamydomonas reinhardtii HOM05D008006 ORTHO05D010181 2.2e-19 100.5 301 32.9
Hma1.2p1_2924F.1_g330380 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 6.3e-11 72.4 57 56.1


User provided reference genes

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