Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G2493 Fragaria x ananassa HOM05D006745 ORTHO05D008449 2.2e-117 425.6 211 100.0
FAN19G0356 Fragaria x ananassa HOM05D006745 ORTHO05D008449 4.0e-87 325.1 243 74.1
FAN23G2677 Fragaria x ananassa HOM05D006745 ORTHO05D008449 1.6e-83 313.2 243 72.0
FAN26G1827 Fragaria x ananassa HOM05D006745 ORTHO05D008449 6.6e-82 307.8 243 71.2
RcHm_v2.0_Chr2g0098641 Rosa chinensis HOM05D006745 ORTHO05D008449 3.4e-78 295.4 240 66.2
MD15G1238900 Malus domestica HOM05D006745 ORTHO05D008449 5.3e-71 271.6 241 60.2
CiPaw.07G062000 Carya illinoinensis HOM05D006745 ORTHO05D008449 2.9e-69 265.8 218 62.8
Manes.01G150100 Manihot esculenta HOM05D006745 ORTHO05D008449 3.5e-67 258.8 240 57.9
Prupe.7G173600 Prunus persica HOM05D006745 ORTHO05D008449 3.9e-66 255.4 240 58.3
Cfa007050 Carpinus fangiana HOM05D006745 ORTHO05D008449 5.1e-66 255.0 237 57.8
Atru.chr3.895 Acer truncatum HOM05D006745 ORTHO05D008449 1.1e-65 253.8 217 60.4
Thhalv10023706m.g Eutrema salsugineum HOM05D006745 ORTHO05D008449 1.1e-65 253.8 211 63.5
QL06p051396 Quercus lobata HOM05D006745 ORTHO05D008449 2.5e-65 252.7 232 57.8
Actinidia28725 Actinidia chinensis HOM05D006745 ORTHO05D008449 8.1e-64 247.7 234 56.4
TWI73G1304 Tripterygium wilfordii HOM05D006745 ORTHO05D008449 8.1e-64 247.7 230 57.4
VMungo1215G1582 Vigna mungo HOM05D006745 ORTHO05D008449 1.8e-63 246.5 233 57.5
CANSAT01G0215 Cannabis sativa HOM05D006745 ORTHO05D008449 3.1e-63 245.7 235 57.9
Eucgr.I02315 Eucalyptus grandis HOM05D006745 ORTHO05D008449 3.1e-63 245.7 243 54.3
Potri.005G109000 Populus trichocarpa HOM05D006745 ORTHO05D008449 3.1e-63 245.7 238 55.0
Glyma.01G163200 Glycine max HOM05D006745 ORTHO05D008449 5.3e-63 245.0 238 55.5
vmacro18434 Vaccinium macrocarpon HOM05D006745 ORTHO05D008449 5.3e-63 245.0 234 56.0
Lj2A482T63 Lonicera japonica HOM05D006745 ORTHO05D008449 2.6e-62 242.7 238 56.7
Phvul.002G105300 Phaseolus vulgaris HOM05D006745 ORTHO05D008449 2.6e-62 242.7 238 55.0
arahy.Tifrunner.gnm1.ann1.DU2BQF Arachis hypogaea HOM05D006745 ORTHO05D008449 3.4e-62 242.3 239 55.6
arahy.Tifrunner.gnm1.ann1.EE1FTG Arachis hypogaea HOM05D006745 ORTHO05D008449 3.4e-62 242.3 239 55.6
Gohir.D11G044400 Gossypium hirsutum HOM05D006745 ORTHO05D008449 9.9e-62 240.7 239 54.4
Gorai.007G047700 Gossypium raimondii HOM05D006745 ORTHO05D008449 9.9e-62 240.7 239 54.4
Sp2g00830 Schrenkiella parvula HOM05D006745 ORTHO05D008449 9.9e-62 240.7 212 59.9
Gohir.A11G041100 Gossypium hirsutum HOM05D006745 ORTHO05D008449 1.3e-61 240.4 239 54.4
Ciclev10026368m.g Citrus clementina HOM05D006745 ORTHO05D008449 2.9e-61 239.2 238 53.4
FvH4_1g11230 Fragaria vesca HOM05D006745 ORTHO05D008449 4.9e-61 238.4 163 79.1
Nn6g31942 Nelumbo nucifera HOM05D006745 ORTHO05D008449 6.4e-61 238.0 237 54.0
Oeu058205.1 Olea europaea HOM05D006745 ORTHO05D008449 8.4e-61 237.7 238 55.5
Oeu058207.1 Olea europaea HOM05D006745 ORTHO05D008449 8.4e-61 237.7 238 55.5
GSVIVG01007224001 Vitis vinifera HOM05D006745 ORTHO05D008449 8.4e-61 237.7 234 55.6
Haze_03682 Corylus avellana HOM05D006745 ORTHO05D008449 1.1e-60 237.3 223 57.0
Ah.02g123330 Amaranthus hybridus HOM05D006745 ORTHO05D008449 1.4e-60 236.9 231 55.4
CSS0046970 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 1.9e-60 236.5 216 57.9
PGR119G0426 Punica granatum HOM05D006745 ORTHO05D008449 1.9e-60 236.5 239 52.7
AUR62003702 Chenopodium quinoa HOM05D006745 ORTHO05D008449 2.4e-60 236.1 241 53.1
CSS0026839 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 3.2e-60 235.7 216 57.9
Rhsim08G0031100 Rhododendron simsii HOM05D006745 ORTHO05D008449 3.2e-60 235.7 228 55.3
THA.LOC104817830 Tarenaya hassleriana HOM05D006745 ORTHO05D008449 3.2e-60 235.7 242 53.3
AL2G11270 Arabidopsis lyrata HOM05D006745 ORTHO05D008449 1.2e-59 233.8 242 53.3
HanXRQChr16g0531741 Helianthus annuus HOM05D006745 ORTHO05D008449 1.2e-59 233.8 236 53.8
Lj2g0007566 Lotus japonicus HOM05D006745 ORTHO05D008449 1.2e-59 233.8 241 53.5
AT1G63855 Arabidopsis thaliana HOM05D006745 ORTHO05D008449 7.9e-59 231.1 210 59.0
Solyc02g061950.4 Solanum lycopersicum HOM05D006745 ORTHO05D008449 7.9e-59 231.1 238 54.2
Carub.0002s0099 Capsella rubella HOM05D006745 ORTHO05D008449 1.0e-58 230.7 241 53.1
A09p13970 Brassica napus HOM05D006745 ORTHO05D008449 1.3e-58 230.3 242 53.3
BcaB07g31542 Brassica carinata HOM05D006745 ORTHO05D008449 1.8e-58 229.9 241 53.1
Lsat_1_v5_gn_3_71521 Lactuca sativa HOM05D006745 ORTHO05D008449 6.7e-58 228.0 234 53.4
ECA246G0119 Erigeron canadensis HOM05D006745 ORTHO05D008449 8.7e-58 227.6 236 53.4
BcaC04g22678 Brassica carinata HOM05D006745 ORTHO05D008449 1.1e-57 227.3 241 52.3
BolC9t54579H Brassica oleracea HOM05D006745 ORTHO05D008449 1.1e-57 227.3 241 52.3
CsaV3_6G047410 Cucumis sativus L. HOM05D006745 ORTHO05D008449 1.9e-57 226.5 236 50.0
Sopen02g012910 Solanum pennellii HOM05D006745 ORTHO05D008449 1.9e-57 226.5 238 53.8
PSO675G1483 Papaver somniferum HOM05D006745 ORTHO05D008449 2.5e-57 226.1 223 53.8
MELO3C007934.2 Cucumis melo HOM05D006745 ORTHO05D008449 3.3e-57 225.7 236 50.0
PGSC0003DMG401023885 Solanum tuberosum HOM05D006745 ORTHO05D008449 4.3e-57 225.3 238 52.9
Thecc.01G012900 Theobroma cacao HOM05D006745 ORTHO05D008449 1.3e-56 223.8 240 51.7
Aa31LG2G1020 Aethionema arabicum HOM05D006745 ORTHO05D008449 2.1e-56 223.0 229 52.4
CAN.G576.2 Capsicum annuum HOM05D006745 ORTHO05D008449 2.1e-56 223.0 238 52.1
Ca_24936_v3 Cicer arietinum L. HOM05D006745 ORTHO05D008449 2.1e-56 223.0 238 52.9
PSO541G1183 Papaver somniferum HOM05D006745 ORTHO05D008449 2.8e-56 222.6 243 50.2
Atru.chr3.884 Acer truncatum HOM05D006745 ORTHO05D008449 3.7e-56 222.2 190 60.5
Nitab4.5_0000188g0160 Nicotiana tabacum HOM05D006745 ORTHO05D008449 4.8e-56 221.9 269 48.0
EL10Ac6g15168 Beta vulgaris HOM05D006745 ORTHO05D008449 6.2e-56 221.5 236 51.3
TPR.G25110 Trifolium pratense HOM05D006745 ORTHO05D008449 6.2e-56 221.5 238 51.3
Sed0008453 Sechium edule HOM05D006745 ORTHO05D008449 8.1e-56 221.1 231 50.6
Zm00001eb229980 Zea mays HOM05D006745 ORTHO05D008449 1.4e-55 220.3 238 50.8
DCAR_023133 Daucus carota HOM05D006745 ORTHO05D008449 2.4e-55 219.5 238 50.8
unitig_60.g25574 Utricularia gibba HOM05D006745 ORTHO05D008449 2.4e-55 219.5 260 49.6
Os02g0120300 Oryza sativa ssp. japonica HOM05D006745 ORTHO05D008449 3.1e-55 219.2 236 50.4
Sc22g0002270 Simmondsia chinensis HOM05D006745 ORTHO05D008449 3.1e-55 219.2 240 47.9
Migut.N00678 Erythranthe guttata HOM05D006745 ORTHO05D008449 4.0e-55 218.8 240 50.4
BcaC04g22675 Brassica carinata HOM05D006745 ORTHO05D008449 1.2e-54 217.2 244 51.6
Lalb_Chr09g0321491 Lupinus albus HOM05D006745 ORTHO05D008449 1.2e-54 217.2 235 52.3
Sabra05G0089300 Salix brachista HOM05D006745 ORTHO05D008449 1.2e-54 217.2 214 54.2
Medtr5g022860 Medicago truncatula HOM05D006745 ORTHO05D008449 1.5e-54 216.9 238 50.0
Aqoxy6G02103 Aquilegia oxysepala HOM05D006745 ORTHO05D008449 4.5e-54 215.3 248 48.4
Psat2g152400 Pisum sativum HOM05D006745 ORTHO05D008449 4.5e-54 215.3 240 49.6
Duzib147G0156 Durio zibethinus HOM05D006745 ORTHO05D008449 1.3e-53 213.8 232 51.7
SGA_v2.0_scaffold77G25309 Striga asiatica HOM05D006745 ORTHO05D008449 1.3e-53 213.8 241 50.6
Cc07_g11200 Coffea canephora HOM05D006745 ORTHO05D008449 8.4e-53 211.1 209 53.1
ATR0661G256 Amborella trichopoda HOM05D006745 ORTHO05D008449 3.2e-52 209.1 234 49.1
ClCG01G020530 Citrullus lanatus HOM05D006745 ORTHO05D008449 1.6e-51 206.8 253 46.6
HPP92_012950 Vanilla planifolia HOM05D006745 ORTHO05D008449 5.1e-50 201.8 238 45.4
Cpa.g.sc29.52 Carica papaya HOM05D006745 ORTHO05D008449 2.8e-48 196.1 168 61.9
AUR62018011 Chenopodium quinoa HOM05D006745 ORTHO05D008449 1.1e-47 194.1 202 54.5
SalBow3G1250 Salvia bowleyana HOM05D006745 ORTHO05D008449 1.9e-44 183.3 229 48.9
SMO340G0117 Selaginella moellendorffii HOM05D006745 ORTHO05D008449 7.4e-41 171.4 230 42.2
Nitab4.5_0002337g0130 Nicotiana tabacum HOM05D006745 ORTHO05D008449 9.7e-41 171.0 164 56.7
Peaxi162Scf00439g00049 Petunia axillaris HOM05D006745 ORTHO05D008449 9.7e-41 171.0 261 42.1
Pp3c3_3170 Physcomitrium patens HOM05D006745 ORTHO05D008449 6.9e-39 164.9 232 42.2
CSS0012608 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 5.9e-38 161.8 198 50.5
Aqoxy278s001 Aquilegia oxysepala HOM05D006745 ORTHO05D008449 1.9e-36 156.8 216 42.1
Mapoly0041s0084 Marchantia polymorpha HOM05D006745 ORTHO05D008449 7.2e-36 154.8 232 40.5
Pp3c3_3178 Physcomitrium patens HOM05D006745 ORTHO05D008449 1.0e-34 151.0 232 39.2
CDE05G1799 Ceratophyllum demersum HOM05D006745 ORTHO05D008449 2.5e-33 146.4 237 38.8
Glyma.02G164500 Glycine max HOM05D006745 ORTHO05D008449 8.2e-32 141.4 217 38.2
CARHR047280 Cardamine hirsuta HOM05D006745 ORTHO05D008449 6.5e-29 131.7 136 50.0
CARHR047310 Cardamine hirsuta HOM05D006745 ORTHO05D008449 9.4e-28 127.9 174 44.3
Sed0011409 Sechium edule HOM05D006745 ORTHO05D008449 4.7e-27 125.6 267 33.3
MSTRG.17961 Avicennia marina HOM05D006745 ORTHO05D008449 8.8e-26 121.3 98 65.3
BraA09t37044Z Brassica rapa HOM05D006745 ORTHO05D008449 1.5e-25 120.6 99 65.7
SEGI_40099 Sequoiadendron giganteum HOM05D006745 ORTHO05D008449 5.9e-22 108.6 77 64.9
Rhsim01G0268300 Rhododendron simsii HOM05D006745 ORTHO05D008449 1.3e-21 107.5 119 50.4
arahy.Tifrunner.gnm1.ann1.N8WRPV Arachis hypogaea HOM05D006745 ORTHO05D008449 1.7e-21 107.1 155 41.9
Medtr2g078490 Medicago truncatula HOM05D006745 ORTHO05D008449 1.7e-21 107.1 206 36.9
Hund14069 Selenicereus undatus HOM05D006745 ORTHO05D008449 7.2e-20 101.7 164 42.1
Medtr3g096562 Medicago truncatula HOM05D006745 ORTHO05D008449 1.4e-18 97.4 180 36.7
Medtr3g096570 Medicago truncatula HOM05D006745 ORTHO05D008449 8.8e-18 94.7 143 41.3
Glyma.11G080201 Glycine max HOM05D006745 ORTHO05D008449 1.3e-16 90.9 60 66.7
COL.COLO4_22483 Corchorus olitorius HOM05D006745 ORTHO05D008449 3.2e-12 76.3 49 69.4


User provided reference genes

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