Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G2015 Fragaria x ananassa HOM05D010166 ORTHO05D205652 3.2e-127 458.4 223 100.0
FAN10G3035 Fragaria x ananassa HOM05D010166 ORTHO05D207531 3.5e-118 428.3 246 88.2
FAN17G1839 Fragaria x ananassa HOM05D010166 ORTHO05D204969 1.3e-115 419.9 246 86.6
FAN11G3088 Fragaria x ananassa HOM05D010166 ORTHO05D210407 7.4e-108 394.0 230 85.7
FAN12G1614 Fragaria x ananassa HOM05D010166 ORTHO05D005239 3.3e-71 272.3 140 92.9
FAN23G2331 Fragaria x ananassa HOM05D010166 ORTHO05D014634 2.6e-52 209.5 102 97.1
FAN23G2409 Fragaria x ananassa HOM05D010166 ORTHO05D014634 2.6e-52 209.5 102 97.1
FvH4_5g22560 Fragaria vesca HOM05D010166 ORTHO05D014634 3.4e-52 209.1 100 99.0
FAN18G3261 Fragaria x ananassa HOM05D010166 ORTHO05D014634 3.4e-52 209.1 102 97.1
FAN18G4494 Fragaria x ananassa HOM05D010166 ORTHO05D209891 3.4e-52 209.1 157 70.1
FAN25G1772 Fragaria x ananassa HOM05D010166 ORTHO05D014634 3.4e-52 209.1 102 97.1
FAN10G3240 Fragaria x ananassa HOM05D010166 ORTHO05D014634 7.5e-52 208.0 102 96.1
FAN13G2777 Fragaria x ananassa HOM05D010166 ORTHO05D014634 9.8e-52 207.6 102 96.1
FAN11G1066 Fragaria x ananassa HOM05D010166 ORTHO05D014634 1.3e-51 207.2 102 96.1
FAN10G1464 Fragaria x ananassa HOM05D010166 ORTHO05D014634 2.2e-51 206.5 102 96.1
FAN12G0932 Fragaria x ananassa HOM05D010166 ORTHO05D014634 2.2e-51 206.5 102 96.1
FAN25G0135 Fragaria x ananassa HOM05D010166 ORTHO05D014634 2.9e-51 206.1 102 95.1
FAN09G1099 Fragaria x ananassa HOM05D010166 ORTHO05D014634 6.4e-51 204.9 102 96.1
FAN18G0379 Fragaria x ananassa HOM05D010166 ORTHO05D014634 5.4e-50 201.8 100 96.0
FAN24G0636 Fragaria x ananassa HOM05D010166 ORTHO05D010681 4.7e-46 188.7 113 83.2
FAN08G1398 Fragaria x ananassa HOM05D010166 ORTHO05D199405 1.0e-40 171.0 97 84.5
FAN04G2592 Fragaria x ananassa HOM05D010166 ORTHO05D014634 3.0e-40 169.5 87 93.1
FAN12G2273 Fragaria x ananassa HOM05D007741 ORTHO05D209008 1.7e-32 143.7 143 54.5
FAN15G3031 Fragaria x ananassa HOM05D007741 ORTHO05D014215 1.4e-29 134.0 142 56.3
FAN06G3290 Fragaria x ananassa HOM05D007741 ORTHO05D203466 2.9e-27 126.3 144 52.1
FAN23G2308 Fragaria x ananassa HOM05D007741 ORTHO05D014215 1.3e-24 117.5 118 58.5
FAN21G2484 Fragaria x ananassa HOM05D007741 ORTHO05D014215 3.0e-24 116.3 133 53.4
FAN04G0311 Fragaria x ananassa HOM05D007741 ORTHO05D209742 8.7e-24 114.8 119 55.5
FAN13G2213 Fragaria x ananassa HOM05D007741 ORTHO05D208410 1.1e-23 114.4 103 60.2
FAN15G0375 Fragaria x ananassa HOM05D007741 ORTHO05D014215 3.3e-23 112.8 114 58.8
FAN22G0864 Fragaria x ananassa HOM05D007741 ORTHO05D014215 5.6e-23 112.1 139 49.6
RcHm_v2.0_Chr1g0346381 Rosa chinensis HOM05D007741 ORTHO05D016318 9.0e-21 104.8 134 53.0
RcHm_v2.0_Chr4g0423141 Rosa chinensis HOM05D007741 ORTHO05D016318 9.0e-21 104.8 134 53.0
FAN11G1680 Fragaria x ananassa HOM05D007741 ORTHO05D204100 2.9e-19 99.8 121 52.1
RcHm_v2.0_Chr1g0339901 Rosa chinensis HOM05D007741 ORTHO05D016318 8.4e-19 98.2 116 54.3
RcHm_v2.0_Chr2g0119361 Rosa chinensis HOM05D007741 ORTHO05D016318 8.4e-19 98.2 116 54.3
RcHm_v2.0_Chr5g0050261 Rosa chinensis HOM05D007741 ORTHO05D014215 4.6e-17 92.4 190 40.0
RcHm_v2.0_Chr3g0465101 Rosa chinensis HOM05D007741 ORTHO05D342996 2.5e-15 86.7 152 42.8
RcHm_v2.0_Chr1g0351211 Rosa chinensis HOM05D007741 ORTHO05D015647 3.3e-15 86.3 117 47.0
RcHm_v2.0_Chr7g0204591 Rosa chinensis HOM05D007741 ORTHO05D016318 3.3e-15 86.3 122 48.4
FAN15G0652 Fragaria x ananassa HOM05D007741 ORTHO05D014215 1.6e-14 84.0 108 48.1
FAN15G0259 Fragaria x ananassa HOM05D007741 ORTHO05D200480 1.8e-13 80.5 244 32.0
FAN19G0161 Fragaria x ananassa HOM05D007741 ORTHO05D204998 2.4e-13 80.1 122 45.1
RcHm_v2.0_Chr4g0427731 Rosa chinensis HOM05D007741 ORTHO05D006912 2.4e-13 80.1 117 43.6
FAN20G1840 Fragaria x ananassa HOM05D007741 ORTHO05D202158 9.0e-13 78.2 129 41.1
FAN18G4008 Fragaria x ananassa HOM05D007741 ORTHO05D200570 2.6e-12 76.6 86 54.7
RcHm_v2.0_Chr1g0358041 Rosa chinensis HOM05D007741 ORTHO05D347005 5.8e-12 75.5 122 44.3
RcHm_v2.0_Chr4g0422751 Rosa chinensis HOM05D007741 ORTHO05D016318 5.8e-12 75.5 108 46.3
FAN10G2132 Fragaria x ananassa HOM05D007741 ORTHO05D204785 1.3e-11 74.3 101 46.5
FAN02G1663 Fragaria x ananassa HOM05D007741 ORTHO05D014215 3.8e-11 72.8 61 62.3
RcHm_v2.0_Chr6g0279711 Rosa chinensis HOM05D007741 ORTHO05D016318 6.5e-11 72.0 100 48.0
RcHm_v2.0_Chr4g0442201 Rosa chinensis HOM05D028330 ORTHO05D342349 8.4e-11 71.6 135 40.7
RcHm_v2.0_Chr2g0151251 Rosa chinensis HOM05D005636 ORTHO05D006912 1.9e-10 70.5 105 41.0
FAN21G0226 Fragaria x ananassa HOM05D007741 ORTHO05D208582 2.5e-10 70.1 175 33.1
FAN12G3907 Fragaria x ananassa HOM05D022609 ORTHO05D029410 4.2e-10 69.3 93 47.3
RcHm_v2.0_Chr2g0140171 Rosa chinensis HOM05D007741 ORTHO05D015647 4.2e-10 69.3 98 41.8
FAN11G0182 Fragaria x ananassa HOM05D007741 ORTHO05D016318 9.3e-10 68.2 84 51.2
RcHm_v2.0_Chr7g0204801 Rosa chinensis HOM05D007741 ORTHO05D016318 1.2e-09 67.8 70 58.6
FAN02G2687 Fragaria x ananassa HOM05D007741 ORTHO05D211123 1.6e-09 67.4 150 38.0
FAN22G0676 Fragaria x ananassa HOM05D007741 ORTHO05D204708 2.1e-09 67.0 112 42.0
FAN22G2406 Fragaria x ananassa HOM05D007741 ORTHO05D210186 2.1e-09 67.0 112 42.0
FAN27G3337 Fragaria x ananassa HOM05D007741 ORTHO05D016314 2.7e-09 66.6 102 47.1
FvH4_5g00140 Fragaria vesca HOM05D007761 ORTHO05D015647 1.0e-08 64.7 124 41.1
FAN10G2127 Fragaria x ananassa HOM05D022609 ORTHO05D029410 1.0e-08 64.7 55 56.4
RcHm_v2.0_Chr4g0422711 Rosa chinensis HOM05D007741 ORTHO05D011461 1.3e-08 64.3 134 38.8
RcHm_v2.0_Chr7g0201181 Rosa chinensis HOM05D007741 ORTHO05D014215 1.3e-08 64.3 72 56.9
RcHm_v2.0_Chr6g0280951 Rosa chinensis HOM05D007761 ORTHO05D011461 1.8e-08 63.9 112 42.9
FAN23G1385 Fragaria x ananassa HOM05D015953 ORTHO05D019200 3.0e-08 63.2 92 43.5
RcHm_v2.0_Chr4g0424711 Rosa chinensis HOM05D007741 ORTHO05D006912 3.9e-08 62.8 92 46.7
RcHm_v2.0_Chr7g0213041 Rosa chinensis HOM05D007741 ORTHO05D014215 5.1e-08 62.4 72 52.8
FvH4_6g29890 Fragaria vesca HOM05D007741 ORTHO05D014215 6.7e-08 62.0 79 46.8
FAN19G1218 Fragaria x ananassa HOM05D007741 ORTHO05D035834 1.1e-07 61.2 91 42.9
RcHm_v2.0_Chr1g0367541 Rosa chinensis HOM05D007741 ORTHO05D011083 1.5e-07 60.8 87 40.2
FAN18G4524 Fragaria x ananassa HOM05D011394 ORTHO05D015655 3.3e-07 59.7 37 73.0
FAN27G1809 Fragaria x ananassa HOM05D007761 ORTHO05D206830 2.1e-06 57.0 98 37.8
FvH4_5g02251 Fragaria vesca HOM05D000005 ORTHO05D000294 2.8e-06 56.6 117 38.5
FAN25G2115 Fragaria x ananassa HOM05D007741 ORTHO05D014215 3.7e-06 56.2 94 40.4
FAN14G3085 Fragaria x ananassa HOM05D007741 ORTHO05D201723 4.8e-06 55.8 186 32.8
FAN11G1752 Fragaria x ananassa HOM05D007741 ORTHO05D204122 6.3e-06 55.5 195 31.3
RcHm_v2.0_Chr6g0312921 Rosa chinensis HOM05D007741 ORTHO05D014215 6.3e-06 55.5 54 59.3
FAN24G3283 Fragaria x ananassa HOM05D007741 ORTHO05D201185 8.2e-06 55.1 61 54.1
RcHm_v2.0_Chr1g0330531 Rosa chinensis HOM05D007741 ORTHO05D011461 8.2e-06 55.1 94 41.5
RcHm_v2.0_Chr3g0459951 Rosa chinensis HOM05D007741 ORTHO05D342834 8.2e-06 55.1 114 37.7
RcHm_v2.0_Chr6g0277431 Rosa chinensis HOM05D007741 ORTHO05D014215 8.2e-06 55.1 54 57.4


User provided reference genes

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