Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.7e-70 269.2 138 100.0
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 9.4e-69 263.5 135 98.5
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 1.3e-57 226.5 119 99.2
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 1.3e-46 189.9 116 87.1
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.4e-35 153.3 79 100.0
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 1.3e-33 146.7 126 61.9
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 1.7e-33 146.4 109 69.7
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 5.4e-32 141.4 107 70.1
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 9.1e-32 140.6 105 67.6
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 1.6e-31 139.8 108 67.6
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 1.6e-31 139.8 87 77.0
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 2.0e-31 139.4 109 67.0
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 3.5e-31 138.7 90 78.9
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 3.5e-31 138.7 108 63.9
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 3.5e-31 138.7 107 67.3
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 4.5e-31 138.3 103 69.9
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 5.9e-31 137.9 104 70.2
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 5.9e-31 137.9 107 69.2
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 5.9e-31 137.9 107 69.2
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 2.9e-30 135.6 104 67.3
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 6.6e-30 134.4 90 72.2
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 1.1e-29 133.7 91 78.0
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 1.1e-29 133.7 98 71.4
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.5e-29 133.3 111 62.2
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 1.5e-29 133.3 108 65.7
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 1.9e-29 132.9 108 65.7
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 2.5e-29 132.5 113 62.8
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 2.5e-29 132.5 106 64.2
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 4.2e-29 131.7 114 63.2
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 4.2e-29 131.7 74 82.4
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 4.2e-29 131.7 95 68.4
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 5.5e-29 131.3 105 65.7
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 7.2e-29 131.0 116 62.1
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 9.5e-29 130.6 105 65.7
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.6e-28 129.8 105 65.7
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.6e-28 129.8 105 65.7
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 3.6e-28 128.6 101 65.3
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 3.6e-28 128.6 112 61.6
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 4.7e-28 128.3 98 69.4
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 4.7e-28 128.3 89 71.9
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 6.1e-28 127.9 119 61.3
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 8.0e-28 127.5 88 76.1
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 8.0e-28 127.5 102 64.7
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 1.0e-27 127.1 95 70.5
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 1.0e-27 127.1 95 67.4
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 1.0e-27 127.1 87 74.7
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 1.8e-27 126.3 107 66.4
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 1.8e-27 126.3 107 60.7
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 2.3e-27 125.9 108 63.0
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 5.2e-27 124.8 104 63.5
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 5.2e-27 124.8 102 65.7
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 5.2e-27 124.8 120 59.2
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 5.2e-27 124.8 105 62.9
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 1.5e-26 123.2 105 63.8
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 1.5e-26 123.2 105 63.8
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 1.5e-26 123.2 83 69.9
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 1.5e-26 123.2 109 61.5
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 2.0e-26 122.9 104 63.5
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 2.6e-26 122.5 104 64.4
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 2.6e-26 122.5 104 63.5
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 3.4e-26 122.1 105 62.9
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 3.4e-26 122.1 105 62.9
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 4.4e-26 121.7 105 67.6
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 5.7e-26 121.3 94 67.0
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 7.5e-26 120.9 115 53.9
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 7.5e-26 120.9 86 73.3
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 9.8e-26 120.6 86 73.3
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 9.8e-26 120.6 79 73.4
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 1.3e-25 120.2 99 63.6
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 2.2e-25 119.4 86 73.3
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 2.9e-25 119.0 113 57.5
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 3.7e-25 118.6 113 57.5
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 3.7e-25 118.6 113 57.5
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 4.9e-25 118.2 84 71.4
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 4.9e-25 118.2 97 64.9
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 6.3e-25 117.9 87 71.3
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 8.3e-25 117.5 88 70.5
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 1.4e-24 116.7 101 62.4
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 4.1e-24 115.2 79 69.6
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 5.4e-24 114.8 82 65.9
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 3.5e-23 112.1 119 51.3
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 4.6e-23 111.7 124 50.0
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 3.9e-22 108.6 105 54.3
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 1.5e-21 106.7 89 65.2
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 2.1e-12 76.3 71 59.2
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 3.1e-11 72.4 69 60.9
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 4.0e-11 72.0 82 56.1
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 1.2e-10 70.5 61 67.2
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 1.5e-10 70.1 39 76.9
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 2.2e-09 66.2 73 53.4
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 1.1e-08 63.9 55 60.0
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 6.0e-07 58.2 72 48.6
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 2.3e-06 56.2 69 37.7


User provided reference genes

Program Settings