Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G1526 Fragaria x ananassa HOM05D006096 ORTHO05D007775 1.1e-204 716.5 360 100.0
FAN23G0863 Fragaria x ananassa HOM05D006096 ORTHO05D007775 4.6e-160 568.2 394 78.7
FvH4_1g20510 Fragaria vesca HOM05D006096 ORTHO05D007775 1.9e-153 546.2 413 74.1
FAN19G2919 Fragaria x ananassa HOM05D006096 ORTHO05D007775 9.1e-148 527.3 366 79.8
RcHm_v2.0_Chr2g0112761 Rosa chinensis HOM05D006096 ORTHO05D007775 1.6e-136 490.0 413 67.6
Prupe.6G191000 Prunus persica HOM05D006096 ORTHO05D007775 1.8e-111 406.8 408 58.3
MD01G1033500 Malus domestica HOM05D006096 ORTHO05D007775 2.3e-106 389.8 409 55.5
Rhsim08G0012600 Rhododendron simsii HOM05D006096 ORTHO05D007775 3.5e-83 312.8 383 49.6
Haze_24882 Corylus avellana HOM05D006096 ORTHO05D007775 3.0e-82 309.7 407 47.4
Atru.chr3.1373 Acer truncatum HOM05D006096 ORTHO05D007775 1.6e-80 303.9 415 45.1
Duzib187G1253 Durio zibethinus HOM05D006096 ORTHO05D007775 4.0e-79 299.3 410 45.9
Cpa.g.sc55.89 Carica papaya HOM05D006096 ORTHO05D007775 1.5e-78 297.4 406 46.6
Gorai.011G113400 Gossypium raimondii HOM05D006096 ORTHO05D007775 2.0e-78 297.0 415 44.8
Actinidia28854 Actinidia chinensis HOM05D006096 ORTHO05D007775 3.4e-78 296.2 400 46.5
Gohir.A10G085100 Gossypium hirsutum HOM05D006096 ORTHO05D007775 9.9e-78 294.7 411 44.3
Haze_24873 Corylus avellana HOM05D006096 ORTHO05D007775 2.2e-77 293.5 371 48.0
CANSAT01G2346 Cannabis sativa HOM05D006096 ORTHO05D007775 4.9e-77 292.4 457 41.8
CSS0046442 Camellia sinensis var. sinensis HOM05D006096 ORTHO05D007775 2.1e-75 287.0 420 43.8
TWI53G1189 Tripterygium wilfordii HOM05D006096 ORTHO05D007775 6.0e-75 285.4 417 45.8
vmacro18587 Vaccinium macrocarpon HOM05D006096 ORTHO05D007775 8.7e-74 281.6 413 43.6
Sc16g0000180 Simmondsia chinensis HOM05D006096 ORTHO05D007775 2.5e-73 280.0 402 43.8
Sed0027583 Sechium edule HOM05D006096 ORTHO05D007775 2.8e-72 276.6 407 44.7
Sabra05G0060100 Salix brachista HOM05D006096 ORTHO05D007775 3.6e-72 276.2 369 45.3
Nn1g05418 Nelumbo nucifera HOM05D006096 ORTHO05D007775 9.0e-71 271.6 422 43.1
Eucgr.H04751 Eucalyptus grandis HOM05D006096 ORTHO05D007775 9.9e-70 268.1 413 42.1
Potri.005G073600 Populus trichocarpa HOM05D006096 ORTHO05D007775 3.8e-69 266.2 411 41.8
EL10Ac6g15136 Beta vulgaris HOM05D006096 ORTHO05D007775 1.1e-68 264.6 442 39.6
Psat5g090600 Pisum sativum HOM05D006096 ORTHO05D007775 2.4e-68 263.5 410 43.4
PGSC0003DMG400016160 Solanum tuberosum HOM05D006096 ORTHO05D007775 4.2e-68 262.7 410 43.4
TPR.G15994 Trifolium pratense HOM05D006096 ORTHO05D007775 1.2e-67 261.2 410 41.7
MBI02_g02177_MAGBIO Magnolia biondii HOM05D006096 ORTHO05D007775 1.6e-67 260.8 415 42.9
Cc07_g14840 Coffea canephora HOM05D006096 ORTHO05D007775 3.5e-67 259.6 420 41.4
Sopen11g004830 Solanum pennellii HOM05D006096 ORTHO05D007775 3.5e-67 259.6 410 42.9
TAR625G1553 Trochodendron aralioides HOM05D006096 ORTHO05D007775 3.5e-67 259.6 360 43.9
Aqoxy6G00746 Aquilegia oxysepala HOM05D006096 ORTHO05D007775 6.0e-67 258.8 413 41.4
AT5G10320 Arabidopsis thaliana HOM05D006096 ORTHO05D007775 7.9e-67 258.5 419 40.8
BcaC04g19312 Brassica carinata HOM05D006096 ORTHO05D007775 1.3e-66 257.7 418 40.4
Phvul.001G253200 Phaseolus vulgaris HOM05D006096 ORTHO05D007775 1.7e-66 257.3 416 40.4
AL6G20820 Arabidopsis lyrata HOM05D006096 ORTHO05D007775 3.0e-66 256.5 420 41.7
BolC9t59480H Brassica oleracea HOM05D006096 ORTHO05D007775 5.1e-66 255.8 418 40.9
Glyma.18G015800 Glycine max HOM05D006096 ORTHO05D007775 5.1e-66 255.8 413 41.4
C09p67070 Brassica napus HOM05D006096 ORTHO05D007775 3.3e-65 253.1 413 41.4
BcaB08g37116 Brassica carinata HOM05D006096 ORTHO05D007775 7.3e-65 251.9 429 40.1
A10p27260 Brassica napus HOM05D006096 ORTHO05D007775 7.3e-65 251.9 420 40.0
BraA10t44776Z Brassica rapa HOM05D006096 ORTHO05D007775 9.6e-65 251.5 417 40.3
Medtr3g087010 Medicago truncatula HOM05D006096 ORTHO05D007775 1.3e-64 251.1 410 40.7
Lsat_1_v5_gn_5_34320 Lactuca sativa HOM05D006096 ORTHO05D007775 1.6e-64 250.8 411 41.8
Glyma.11G241200 Glycine max HOM05D006096 ORTHO05D007775 2.1e-64 250.4 415 40.7
AUR62001986 Chenopodium quinoa HOM05D006096 ORTHO05D007775 4.8e-64 249.2 461 38.0
Lalb_Chr19g0127391 Lupinus albus HOM05D006096 ORTHO05D007775 6.2e-64 248.8 417 42.0
ECA246G2908 Erigeron canadensis HOM05D006096 ORTHO05D007775 1.1e-63 248.1 411 42.1
Lj6g0005810 Lotus japonicus HOM05D006096 ORTHO05D007775 4.0e-63 246.1 420 41.4
COL.COLO4_27275 Corchorus olitorius HOM05D006096 ORTHO05D007775 6.9e-63 245.4 416 41.3
Hund13600 Selenicereus undatus HOM05D006096 ORTHO05D007775 4.5e-62 242.7 487 35.7
VMungo1383G2853 Vigna mungo HOM05D006096 ORTHO05D007775 5.8e-62 242.3 416 38.9
arahy.Tifrunner.gnm1.ann1.C4UPUA Arachis hypogaea HOM05D006096 ORTHO05D007775 1.3e-61 241.1 421 40.4
arahy.Tifrunner.gnm1.ann1.DD3ZZY Arachis hypogaea HOM05D006096 ORTHO05D007775 1.1e-60 238.0 448 38.8
CAN.G905.37 Capsicum annuum HOM05D006096 ORTHO05D007775 3.2e-60 236.5 374 42.8
SalBow3G4176 Salvia bowleyana HOM05D006096 ORTHO05D007775 5.5e-60 235.7 414 38.4
PSO210G0897 Papaver somniferum HOM05D006096 ORTHO05D007775 2.1e-59 233.8 402 39.1
ATR0684G225 Amborella trichopoda HOM05D006096 ORTHO05D007775 1.1e-57 228.0 416 39.9
PSO447G0355 Papaver somniferum HOM05D006096 ORTHO05D007775 1.1e-57 228.0 404 39.6
Peaxi162Scf00381g01013 Petunia axillaris HOM05D006096 ORTHO05D007775 3.3e-57 226.5 411 39.2
Oeu033049.1 Olea europaea HOM05D006096 ORTHO05D007775 5.6e-57 225.7 368 39.9
ClCG07G017370 Citrullus lanatus HOM05D006096 ORTHO05D007775 1.6e-56 224.2 530 34.3
QL06p048476 Quercus lobata HOM05D006096 ORTHO05D007775 4.8e-56 222.6 343 42.0
Aa31LG3G16830 Aethionema arabicum HOM05D006096 ORTHO05D007775 6.2e-56 222.2 432 37.3
Os04g0451100 Oryza sativa ssp. japonica HOM05D006096 ORTHO05D007775 2.5e-52 210.3 425 37.2
Migut.H02345 Erythranthe guttata HOM05D006096 ORTHO05D007775 2.1e-51 207.2 409 37.4
Thhalv10013818m.g Eutrema salsugineum HOM05D006096 ORTHO05D007775 9.6e-49 198.4 407 35.9
AUR62003818 Chenopodium quinoa HOM05D006096 ORTHO05D007775 1.1e-47 194.9 275 44.7
CsaV3_4G004600 Cucumis sativus L. HOM05D006096 ORTHO05D007775 2.0e-46 190.7 267 46.4
CsaV3_UNG122970 Cucumis sativus L. HOM05D006096 ORTHO05D007775 5.9e-46 189.1 292 43.5
CsaV3_UNG160190 Cucumis sativus L. HOM05D006096 ORTHO05D007775 2.9e-45 186.8 135 68.1
CARHR202970 Cardamine hirsuta HOM05D006096 ORTHO05D007775 2.5e-44 183.7 326 39.3
BcaC04g19315 Brassica carinata HOM05D006096 ORTHO05D007775 3.2e-44 183.3 301 41.2
QL06p048506 Quercus lobata HOM05D006096 ORTHO05D007775 1.2e-43 181.4 328 42.4
CARHR202960 Cardamine hirsuta HOM05D006096 ORTHO05D007775 3.0e-42 176.8 292 40.8
HPP92_011214 Vanilla planifolia HOM05D006096 ORTHO05D007775 3.0e-42 176.8 428 33.4
Cfa002624 Carpinus fangiana HOM05D006096 ORTHO05D007775 8.7e-42 175.3 323 40.2
MELO3C017606.2 Cucumis melo HOM05D006096 ORTHO05D007775 1.1e-41 174.9 556 30.2
SGA_v2.0_scaffold111G31503 Striga asiatica HOM05D006096 ORTHO05D007775 4.3e-41 172.9 400 34.5
CiPaw.03G143900 Carya illinoinensis HOM05D006096 ORTHO05D007775 2.9e-37 160.2 338 37.3
Thecc.01G097900 Theobroma cacao HOM05D006096 ORTHO05D007775 1.1e-36 158.3 314 39.8
QL06p048511 Quercus lobata HOM05D006096 ORTHO05D007775 4.2e-36 156.4 99 72.7
Zm00001eb081250 Zea mays HOM05D006096 ORTHO05D007775 5.5e-36 156.0 198 47.0
CsaV3_UNG223570 Cucumis sativus L. HOM05D006096 ORTHO05D007775 9.4e-36 155.2 139 59.0
Ciclev10026196m.g Citrus clementina HOM05D006096 ORTHO05D007775 1.6e-35 154.5 311 35.7
Nitab4.5_0000743g0130 Nicotiana tabacum HOM05D006096 ORTHO05D007775 2.1e-35 154.1 360 33.3
GSVIVG01006632001 Vitis vinifera HOM05D006096 ORTHO05D007775 6.1e-35 152.5 100 71.0
Nitab4.5_0004570g0020 Nicotiana tabacum HOM05D006096 ORTHO05D007775 1.8e-34 151.0 322 37.0
Pp3c26_3770 Physcomitrium patens HOM05D006096 ORTHO05D007775 1.8e-34 151.0 422 30.1
Dinv08841 Davidia involucrata HOM05D006096 ORTHO05D007775 1.1e-33 148.3 314 36.9
CDE06G0254 Ceratophyllum demersum HOM05D006096 ORTHO05D007775 4.3e-33 146.4 322 33.2
Manes.13G095500 Manihot esculenta HOM05D006096 ORTHO05D007775 5.7e-33 146.0 324 36.4
Gohir.D10G103900 Gossypium hirsutum HOM05D006096 ORTHO05D007775 1.3e-32 144.8 315 35.9
Ca_16518_v3 Cicer arietinum L. HOM05D006096 ORTHO05D007775 3.1e-31 140.2 289 35.3
unitig_899.g14550 Utricularia gibba HOM05D006096 ORTHO05D007775 3.1e-31 140.2 444 30.2
Mapoly0077s0016 Marchantia polymorpha HOM05D006096 ORTHO05D007775 4.1e-31 139.8 463 29.2
Sp6g33110 Schrenkiella parvula HOM05D006096 ORTHO05D007775 8.5e-29 132.1 331 32.9
Carub.0006s0878 Capsella rubella HOM05D006096 ORTHO05D007775 1.6e-27 127.9 85 72.9
Gohir.D10G103800 Gossypium hirsutum HOM05D006096 ORTHO05D007775 1.6e-27 127.9 84 70.2
SMO301G0024 Selaginella moellendorffii HOM05D006096 ORTHO05D007775 2.3e-26 124.0 139 48.9
Solyc11g009060.2 Solanum lycopersicum HOM05D006096 ORTHO05D007775 5.7e-25 119.4 311 33.8
HanXRQChr02g0032011 Helianthus annuus HOM05D006096 ORTHO05D007775 1.7e-24 117.9 301 33.2
MSTRG.23356 Avicennia marina HOM05D006096 ORTHO05D007775 3.7e-24 116.7 192 38.0
Pp3c3_14090 Physcomitrium patens HOM05D006096 ORTHO05D007775 3.7e-24 116.7 409 27.9
DCAR_014211 Daucus carota HOM05D006096 ORTHO05D007775 7.0e-23 112.5 228 37.3
CBR_g53530 Chara braunii HOM05D006096 ORTHO05D007775 2.2e-21 107.5 230 33.9
CBR_g26374 Chara braunii HOM05D006096 ORTHO05D007775 3.8e-21 106.7 108 51.9
HanXRQChr02g0032001 Helianthus annuus HOM05D006096 ORTHO05D007775 9.4e-20 102.1 65 78.5
CARHR202980 Cardamine hirsuta HOM05D006096 ORTHO05D007775 2.1e-19 100.9 237 33.8
Carub.0006s0879 Capsella rubella HOM05D006096 ORTHO05D007775 6.1e-19 99.4 246 35.0
Ah.02g123840 Amaranthus hybridus HOM05D006096 ORTHO05D007775 4.0e-18 96.7 67 64.2
HanXRQChr15g0477621 Helianthus annuus HOM05D006096 ORTHO05D007775 7.7e-14 82.4 273 27.5
Actinidia28243 Actinidia chinensis HOM05D006096 ORTHO05D009823 1.1e-12 78.6 203 32.0
SEGI_02986 Sequoiadendron giganteum HOM05D006096 ORTHO05D007775 7.2e-12 75.9 61 54.1
CsaV3_UNG124970 Cucumis sativus L. HOM05D006096 ORTHO05D007775 3.6e-11 73.6 70 57.1
Cre17.g719050 Chlamydomonas reinhardtii HOM05D006096 ORTHO05D007775 6.1e-11 72.8 107 36.4
RcHm_v2.0_Chr4g0406191 Rosa chinensis HOM05D006096 ORTHO05D007775 8.0e-11 72.4 57 68.4
CsaV3_UNG160180 Cucumis sativus L. HOM05D006096 ORTHO05D007775 3.4e-09 67.0 87 47.1
AagrBONN_evm.TU.Sc2ySwM_344.1220 Anthoceros agrestis HOM05D006096 ORTHO05D007775 2.2e-08 64.3 312 27.2
FvH4_3g06910 Fragaria vesca HOM05D027109 ORTHO05D019758 2.4e-07 60.8 63 55.6
Nitab4.5_0004570g0030 Nicotiana tabacum HOM05D006096 ORTHO05D007775 1.6e-06 58.2 74 44.6
Cc08_g12120 Coffea canephora HOM05D005131 ORTHO05D003188 3.5e-06 57.0 66 53.0


User provided reference genes

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