Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G1502 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.1e-121 438.0 206 100.0
FAN02G0212 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.5e-73 279.3 138 92.8
FvH4_6g49640 Fragaria vesca HOM05D006368 ORTHO05D006739 6.7e-71 271.2 135 92.6
FAN14G2460 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-68 263.8 176 73.3
FAN14G0026 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.3e-52 208.4 110 87.3
FAN14G0442 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.2e-35 154.1 70 98.6
FvH4_4g09083 Fragaria vesca HOM05D009580 ORTHO05D008963 2.0e-27 126.7 86 73.3
FvH4_3g30930 Fragaria vesca HOM05D006368 ORTHO05D006739 2.7e-27 126.3 134 51.5
FAN15G1119 Fragaria x ananassa HOM05D000514 ORTHO05D008963 3.5e-27 125.9 80 76.2
FAN19G3117 Fragaria x ananassa HOM05D009580 ORTHO05D008963 3.5e-27 125.9 88 72.7
FAN04G0475 Fragaria x ananassa HOM05D009580 ORTHO05D008963 3.8e-26 122.5 86 69.8
FAN09G2482 Fragaria x ananassa HOM05D009580 ORTHO05D008963 1.5e-25 120.6 76 73.7
FAN26G3289 Fragaria x ananassa HOM05D009580 ORTHO05D008963 5.6e-25 118.6 77 75.3
FAN22G2396 Fragaria x ananassa HOM05D009580 ORTHO05D008963 4.7e-24 115.5 113 56.6
RcHm_v2.0_Chr4g0430971 Rosa chinensis HOM05D006368 ORTHO05D006739 4.7e-24 115.5 179 39.1
FAN23G0555 Fragaria x ananassa HOM05D009580 ORTHO05D008963 6.1e-24 115.2 77 75.3
FvH4_3g37300 Fragaria vesca HOM05D006368 ORTHO05D006739 8.0e-24 114.8 135 45.2
MD09G1027500 Malus domestica HOM05D006368 ORTHO05D006739 8.0e-24 114.8 139 46.8
FAN22G2323 Fragaria x ananassa HOM05D009580 ORTHO05D008963 4.0e-23 112.5 77 72.7
FAN24G2342 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.0e-23 112.5 193 38.3
Prupe.3G291200 Prunus persica HOM05D006368 ORTHO05D006739 1.2e-22 110.9 136 47.1
FAN25G0253 Fragaria x ananassa HOM05D007789 ORTHO05D008963 2.6e-22 109.8 87 62.1
RcHm_v2.0_Chr5g0067081 Rosa chinensis HOM05D006368 ORTHO05D006739 1.3e-21 107.5 129 44.2
FAN27G0106 Fragaria x ananassa HOM05D009580 ORTHO05D008963 2.2e-21 106.7 77 70.1
Prupe.3G239100 Prunus persica HOM05D006368 ORTHO05D006739 9.2e-20 101.3 133 41.4
FAN20G1708 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.7e-18 97.1 197 35.0
MD09G1050100 Malus domestica HOM05D006368 ORTHO05D006739 3.0e-18 96.3 134 43.3
FvH4_6g47002 Fragaria vesca HOM05D006368 ORTHO05D006739 4.3e-17 92.4 122 42.6
FAN14G0640 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.3e-17 92.4 122 42.6
FAN09G3094 Fragaria x ananassa HOM05D009580 ORTHO05D008963 7.3e-17 91.7 60 73.3
FAN15G0762 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.5e-17 91.3 114 42.1
FAN12G2895 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.2e-16 90.9 141 38.3
FvH4_4g23711 Fragaria vesca HOM05D006368 ORTHO05D006739 1.6e-16 90.5 141 37.6
FAN22G2413 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.7e-16 89.0 168 34.5
FAN02G0373 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.2e-16 88.6 122 41.8
FAN17G1663 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.0e-16 88.2 141 36.2
FAN16G0049 Fragaria x ananassa HOM05D000514 ORTHO05D008963 1.4e-15 87.4 50 82.0
FAN07G0106 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.3e-15 86.7 142 37.3
FAN15G3238 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.0e-15 85.9 142 36.6
FAN02G3903 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.2e-15 85.5 122 40.2
FvH4_6g47001 Fragaria vesca HOM05D006368 ORTHO05D006739 6.8e-15 85.1 123 39.8
FAN15G0408 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.2e-14 84.3 89 46.1
FAN05G3145 Fragaria x ananassa HOM05D009580 ORTHO05D008963 2.0e-14 83.6 61 70.5
FvH4_2g28870 Fragaria vesca HOM05D006368 ORTHO05D006739 2.6e-14 83.2 141 36.9
Dinv25349 Davidia involucrata HOM05D006368 ORTHO05D006739 4.4e-14 82.4 168 35.7
RcHm_v2.0_Chr7g0197821 Rosa chinensis HOM05D006368 ORTHO05D006739 4.4e-14 82.4 118 44.1
FAN28G0779 Fragaria x ananassa HOM05D000514 ORTHO05D008963 7.5e-14 81.6 49 79.6
FAN08G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.7e-13 80.5 114 40.4
FAN18G3544 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.7e-13 80.5 114 40.4
FvH4_5g02330 Fragaria vesca HOM05D006368 ORTHO05D006739 2.2e-13 80.1 114 40.4
FvH4_6g36920 Fragaria vesca HOM05D006368 ORTHO05D006739 3.7e-13 79.3 120 41.7
FAN09G1469 Fragaria x ananassa HOM05D009580 ORTHO05D008963 4.9e-13 79.0 59 66.1
RcHm_v2.0_Chr2g0166171 Rosa chinensis HOM05D006368 ORTHO05D006739 4.9e-13 79.0 109 45.0
FAN13G2475 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.4e-12 76.6 114 39.5
FAN02G1786 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.4e-12 75.5 110 43.6
FAN24G0202 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.4e-12 75.5 109 41.3
FvH4_6g47140 Fragaria vesca HOM05D006368 ORTHO05D006739 2.0e-11 73.6 112 40.2
FAN14G5568 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.7e-11 73.2 112 40.2
FvH4_6g37591 Fragaria vesca HOM05D006368 ORTHO05D006739 4.6e-11 72.4 109 41.3
FAN02G2469 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.0e-11 72.0 111 43.2
RcHm_v2.0_Chr2g0153831 Rosa chinensis HOM05D006368 ORTHO05D006739 1.0e-10 71.2 111 39.6
FAN02G3800 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-10 70.9 116 40.5
FAN09G2575 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-10 70.9 111 43.2
FAN09G3687 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.3e-10 70.1 106 40.6
FAN09G3776 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.3e-10 70.1 106 40.6
FAN26G1231 Fragaria x ananassa HOM05D009580 ORTHO05D008963 2.3e-10 70.1 48 70.8
FAN27G0625 Fragaria x ananassa HOM05D009580 ORTHO05D002484 2.3e-10 70.1 63 58.7
FAN04G2785 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.0e-10 69.7 111 39.6
FAN23G2948 Fragaria x ananassa HOM05D009580 ORTHO05D008963 3.0e-10 69.7 42 76.2
FAN05G0250 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.9e-10 69.3 110 40.9
FAN01G1950 Fragaria x ananassa HOM05D009580 ORTHO05D008963 8.6e-10 68.2 64 54.7
FAN05G4829 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.6e-10 68.2 108 40.7
FAN05G5254 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-09 67.8 103 39.8
FvH4_6g47130 Fragaria vesca HOM05D006368 ORTHO05D006739 1.9e-09 67.0 96 41.7
FAN14G1492 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.9e-09 67.0 96 41.7
FAN14G2751 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.9e-09 67.0 76 46.1
FvH4_6g39721 Fragaria vesca HOM05D006368 ORTHO05D006739 3.3e-09 66.2 108 37.0
FAN18G1993 Fragaria x ananassa HOM05D009580 ORTHO05D008963 3.3e-09 66.2 86 46.5
FAN22G1508 Fragaria x ananassa HOM05D007789 ORTHO05D008963 7.3e-09 65.1 41 70.7
Aqoxy3G03890 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.2e-08 64.3 124 30.6
Aqoxy3G03891 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.2e-08 64.3 124 30.6
FAN09G2683 Fragaria x ananassa HOM05D000514 ORTHO05D000222 2.8e-08 63.2 89 43.8
FvH4_6g46020 Fragaria vesca HOM05D006368 ORTHO05D025547 3.6e-08 62.8 113 38.1
FAN05G2055 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.6e-08 62.8 60 53.3
FAN14G1520 Fragaria x ananassa HOM05D006368 ORTHO05D025547 3.6e-08 62.8 113 38.1
FAN14G5490 Fragaria x ananassa HOM05D006368 ORTHO05D025547 3.6e-08 62.8 113 38.1
Nn1g04501 Nelumbo nucifera HOM05D000151 ORTHO05D000074 3.6e-08 62.8 125 33.6
FAN27G2145 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.2e-08 62.0 67 46.3
FAN20G1542 Fragaria x ananassa HOM05D009580 ORTHO05D008963 1.1e-07 61.2 83 44.6
FAN02G0248 Fragaria x ananassa HOM05D006368 ORTHO05D025547 1.4e-07 60.8 113 36.3
Aqoxy6G02931 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.8e-07 60.5 120 34.2
FAN18G2853 Fragaria x ananassa HOM05D009580 ORTHO05D008963 2.3e-07 60.1 83 44.6
FvH4_6g47170 Fragaria vesca HOM05D006368 ORTHO05D006739 3.1e-07 59.7 108 35.2
Lj2g0009806 Lotus japonicus HOM05D006368 ORTHO05D006739 3.1e-07 59.7 113 37.2
FAN05G1788 Fragaria x ananassa HOM05D006368 ORTHO05D025547 5.2e-07 58.9 113 35.4
Glyma.04G019900 Glycine max HOM05D000151 ORTHO05D000074 1.5e-06 57.4 116 27.6
QL04p010169 Quercus lobata HOM05D000151 ORTHO05D000074 2.0e-06 57.0 121 33.9
FAN14G1402 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.6e-06 56.6 108 33.3
Lalb_Chr23g0265911 Lupinus albus HOM05D000151 ORTHO05D000074 3.4e-06 56.2 116 27.6
FAN02G1675 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.4e-06 55.8 105 34.3
Ca_07674_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 5.8e-06 55.5 113 33.6
FAN02G0769 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.8e-06 55.5 106 35.8
FAN09G4055 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.8e-06 55.5 110 33.6
Lj1P1142T22 Lonicera japonica HOM05D000151 ORTHO05D000074 5.8e-06 55.5 123 32.5
FAN10G0746 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.5e-06 55.1 110 32.7
FAN14G3911 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.5e-06 55.1 110 32.7
Potri.006G015601 Populus trichocarpa HOM05D000151 ORTHO05D000074 7.5e-06 55.1 115 29.6


User provided reference genes

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