Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G1488 Fragaria x ananassa HOM05D006378 ORTHO05D007959 6.1e-205 717.2 358 100.0
FAN26G1418 Fragaria x ananassa HOM05D006378 ORTHO05D007959 9.5e-198 693.3 357 97.5
FAN26G3001 Fragaria x ananassa HOM05D006378 ORTHO05D007959 1.4e-196 689.5 357 96.9
FAN19G1878 Fragaria x ananassa HOM05D006378 ORTHO05D007959 3.4e-195 684.9 357 96.4
RcHm_v2.0_Chr2g0094931 Rosa chinensis HOM05D006378 ORTHO05D007959 6.0e-184 647.5 355 91.5
Prupe.7G198800 Prunus persica HOM05D006378 ORTHO05D007959 2.9e-162 575.5 355 80.0
MD15G1217600 Malus domestica HOM05D006378 ORTHO05D007959 1.3e-154 550.1 362 75.4
Cfa002988 Carpinus fangiana HOM05D006378 ORTHO05D007959 4.2e-137 491.9 359 68.0
GSVIVG01015082001 Vitis vinifera HOM05D006378 ORTHO05D007959 2.2e-133 479.6 364 64.3
CiPaw.03G206400 Carya illinoinensis HOM05D006378 ORTHO05D007959 9.1e-132 474.2 369 65.6
QL11p000773 Quercus lobata HOM05D006378 ORTHO05D007959 9.1e-132 474.2 366 65.3
Dinv42394 Davidia involucrata HOM05D006378 ORTHO05D007959 6.5e-130 468.0 368 62.2
CANSAT56G1041 Cannabis sativa HOM05D006378 ORTHO05D007959 1.9e-129 466.5 367 66.2
Manes.03G040400 Manihot esculenta HOM05D006378 ORTHO05D007959 1.9e-129 466.5 364 62.6
Ciclev10007418m.g Citrus clementina HOM05D006378 ORTHO05D007959 3.2e-129 465.7 367 63.2
Potri.006G141900 Populus trichocarpa HOM05D006378 ORTHO05D007959 4.2e-129 465.3 366 62.0
Sc08g0008890 Simmondsia chinensis HOM05D006378 ORTHO05D007959 4.2e-129 465.3 356 63.5
ClCG03G015080 Citrullus lanatus HOM05D006378 ORTHO05D007959 9.4e-129 464.2 362 63.3
Nn8g38637 Nelumbo nucifera HOM05D006378 ORTHO05D007959 2.1e-128 463.0 365 62.2
Cpa.g.sc28.38 Carica papaya HOM05D006378 ORTHO05D007959 3.0e-127 459.1 359 64.3
MELO3C015521.2 Cucumis melo HOM05D006378 ORTHO05D007959 3.9e-127 458.8 364 63.7
Duzib168G0703 Durio zibethinus HOM05D006378 ORTHO05D007959 5.1e-127 458.4 369 63.7
Sed0026053 Sechium edule HOM05D006378 ORTHO05D007959 5.1e-127 458.4 366 62.0
Thecc.09G076800 Theobroma cacao HOM05D006378 ORTHO05D007959 5.1e-127 458.4 369 64.0
Aqoxy7G04130 Aquilegia oxysepala HOM05D006378 ORTHO05D007959 1.3e-125 453.8 368 61.7
TAR383G0342 Trochodendron aralioides HOM05D006378 ORTHO05D007959 2.2e-125 453.0 368 60.9
arahy.Tifrunner.gnm1.ann1.CBKZ0V Arachis hypogaea HOM05D006378 ORTHO05D007959 2.8e-125 452.6 357 63.3
Sabra06G0111000 Salix brachista HOM05D006378 ORTHO05D007959 3.7e-125 452.2 366 60.7
AUR62025249 Chenopodium quinoa HOM05D006378 ORTHO05D007959 1.4e-124 450.3 359 61.0
CsaV3_1G041050 Cucumis sativus L. HOM05D006378 ORTHO05D007959 2.4e-124 449.5 368 62.0
arahy.Tifrunner.gnm1.ann1.LZ43MP Arachis hypogaea HOM05D006378 ORTHO05D007959 3.1e-124 449.1 357 63.0
Oeu035912.1 Olea europaea HOM05D006378 ORTHO05D007959 5.3e-124 448.4 356 59.8
Hma1.2p1_0179F.1_g079520 Hydrangea macrophylla HOM05D006378 ORTHO05D007959 6.9e-124 448.0 375 60.3
Nitab4.5_0000343g0150 Nicotiana tabacum HOM05D006378 ORTHO05D007959 9.1e-124 447.6 361 61.8
Lj6g0025012 Lotus japonicus HOM05D006378 ORTHO05D007959 1.5e-123 446.8 361 62.0
Nitab4.5_0009436g0010 Nicotiana tabacum HOM05D006378 ORTHO05D007959 4.5e-123 445.3 359 61.6
Gorai.010G088400 Gossypium raimondii HOM05D006378 ORTHO05D007959 5.9e-123 444.9 363 62.5
TPR.G28586 Trifolium pratense HOM05D006378 ORTHO05D007959 5.9e-123 444.9 366 59.6
Ca_02206_v3 Cicer arietinum L. HOM05D006378 ORTHO05D007959 7.7e-123 444.5 366 60.4
Gohir.D06G075500 Gossypium hirsutum HOM05D006378 ORTHO05D007959 1.0e-122 444.1 363 62.5
Medtr2g041640 Medicago truncatula HOM05D006378 ORTHO05D007959 1.3e-122 443.7 361 61.5
Glyma.15G177600 Glycine max HOM05D006378 ORTHO05D007959 2.2e-122 443.0 362 61.9
Gohir.A06G076500 Gossypium hirsutum HOM05D006378 ORTHO05D007959 2.2e-122 443.0 363 63.1
Eucgr.C03329 Eucalyptus grandis HOM05D006378 ORTHO05D007959 3.8e-122 442.2 361 62.3
PGSC0003DMG400019029 Solanum tuberosum HOM05D006378 ORTHO05D007959 8.5e-122 441.0 357 60.8
Peaxi162Scf00127g01816 Petunia axillaris HOM05D006378 ORTHO05D007959 1.1e-121 440.7 357 61.9
Hund08780 Selenicereus undatus HOM05D006378 ORTHO05D007959 1.1e-121 440.7 359 61.3
TWI34G0472 Tripterygium wilfordii HOM05D006378 ORTHO05D007959 1.1e-121 440.7 359 60.2
Cc06_g12180 Coffea canephora HOM05D006378 ORTHO05D007959 1.4e-121 440.3 361 60.9
Lalb_Chr08g0232591 Lupinus albus HOM05D006378 ORTHO05D007959 2.5e-121 439.5 365 59.2
MSTRG.19459 Avicennia marina HOM05D006378 ORTHO05D007959 4.2e-121 438.7 356 62.1
vmacro06342 Vaccinium macrocarpon HOM05D006378 ORTHO05D007959 4.2e-121 438.7 368 59.5
Sopen07g021350 Solanum pennellii HOM05D006378 ORTHO05D007959 1.6e-120 436.8 357 60.8
Eucgr.C03264 Eucalyptus grandis HOM05D006378 ORTHO05D007959 2.1e-120 436.4 361 60.9
Rhsim03G0227500 Rhododendron simsii HOM05D006378 ORTHO05D007959 2.1e-120 436.4 363 58.7
Solyc07g041870.3 Solanum lycopersicum HOM05D006378 ORTHO05D007959 3.6e-120 435.6 357 60.8
VMungo1309G1044 Vigna mungo HOM05D006378 ORTHO05D007959 4.7e-120 435.3 358 60.3
Psat1g134280 Pisum sativum HOM05D006378 ORTHO05D007959 1.4e-119 433.7 363 60.1
SalBow6G1560 Salvia bowleyana HOM05D006378 ORTHO05D007959 1.8e-119 433.3 359 60.7
CSS0003361 Camellia sinensis var. sinensis HOM05D006378 ORTHO05D007959 2.3e-119 433.0 362 59.7
CSS0014220 Camellia sinensis var. sinensis HOM05D006378 ORTHO05D007959 2.3e-119 433.0 362 59.7
Phvul.009G227300 Phaseolus vulgaris HOM05D006378 ORTHO05D007959 2.3e-119 433.0 358 61.2
Migut.J00925 Erythranthe guttata HOM05D006378 ORTHO05D007959 2.0e-118 429.9 357 58.5
Lj7C687T7 Lonicera japonica HOM05D006378 ORTHO05D007959 2.0e-118 429.9 363 60.1
AUR62028935 Chenopodium quinoa HOM05D006378 ORTHO05D007959 3.3e-118 429.1 370 57.6
THA.LOC104826591 Tarenaya hassleriana HOM05D006378 ORTHO05D007959 5.7e-118 428.3 358 60.3
BcaC02g09569 Brassica carinata HOM05D006378 ORTHO05D007959 2.2e-117 426.4 361 59.8
C04p44250 Brassica napus HOM05D006378 ORTHO05D007959 2.2e-117 426.4 361 59.6
BolC4t25998H Brassica oleracea HOM05D006378 ORTHO05D007959 2.2e-117 426.4 361 59.8
EL10Ac8g19061 Beta vulgaris HOM05D006378 ORTHO05D007959 6.3e-117 424.9 359 59.1
BcaB06g26949 Brassica carinata HOM05D006378 ORTHO05D007959 6.3e-117 424.9 361 59.0
BraA04t16723Z Brassica rapa HOM05D006378 ORTHO05D007959 8.2e-117 424.5 365 59.5
Sp7g06720 Schrenkiella parvula HOM05D006378 ORTHO05D007959 2.4e-116 422.9 360 58.9
A04p10600 Brassica napus HOM05D006378 ORTHO05D007959 3.1e-116 422.5 365 59.2
PGR044G1219 Punica granatum HOM05D006378 ORTHO05D007959 7.0e-116 421.4 367 58.3
MBI19_g16222_MAGBIO Magnolia biondii HOM05D006378 ORTHO05D007959 9.1e-116 421.0 367 57.8
Haze_26013 Corylus avellana HOM05D006378 ORTHO05D007959 2.0e-115 419.9 361 61.2
Thhalv10003638m.g Eutrema salsugineum HOM05D006378 ORTHO05D007959 3.5e-115 419.1 366 56.8
SGA_v2.0_scaffold91G28112 Striga asiatica HOM05D006378 ORTHO05D007959 4.5e-115 418.7 357 58.8
Ah.09g231620 Amaranthus hybridus HOM05D006378 ORTHO05D007959 2.9e-114 416.0 360 59.2
Aa31LG2G20840 Aethionema arabicum HOM05D006378 ORTHO05D007959 8.5e-114 414.5 359 57.7
PSO135G0915 Papaver somniferum HOM05D006378 ORTHO05D007959 8.5e-114 414.5 370 55.7
ECA236G3597 Erigeron canadensis HOM05D006378 ORTHO05D007959 3.2e-113 412.5 361 57.3
HanXRQChr06g0178331 Helianthus annuus HOM05D006378 ORTHO05D007959 9.4e-113 411.0 362 56.1
Carub.0002s2445 Capsella rubella HOM05D006378 ORTHO05D007959 1.4e-111 407.1 358 57.3
AT1G77550 Arabidopsis thaliana HOM05D006378 ORTHO05D007959 1.5e-110 403.7 359 56.3
AL2G37770 Arabidopsis lyrata HOM05D006378 ORTHO05D007959 2.0e-110 403.3 358 56.7
Lsat_1_v5_gn_8_86460 Lactuca sativa HOM05D006378 ORTHO05D007959 2.0e-110 403.3 362 56.1
DCAR_011949 Daucus carota HOM05D006378 ORTHO05D007959 2.6e-110 402.9 356 56.2
HPP92_002164 Vanilla planifolia HOM05D006378 ORTHO05D007959 1.0e-103 380.9 370 54.6
COL.COLO4_18097 Corchorus olitorius HOM05D006378 ORTHO05D007959 1.2e-102 377.5 369 55.8
CAN.G62.5 Capsicum annuum HOM05D006378 ORTHO05D007959 1.7e-101 373.6 320 59.4
FvH4_1g08650 Fragaria vesca HOM05D006378 ORTHO05D007959 3.5e-99 365.9 188 95.2
Zm00001eb401890 Zea mays HOM05D006378 ORTHO05D007959 3.5e-99 365.9 364 54.9
unitig_578.g15677 Utricularia gibba HOM05D006378 ORTHO05D007959 1.5e-97 360.5 359 51.5
Os03g0179000 Oryza sativa ssp. japonica HOM05D006378 ORTHO05D007959 6.1e-96 355.1 364 51.9
Pp3c6_19960 Physcomitrium patens HOM05D006378 ORTHO05D007959 2.6e-86 323.2 354 46.6
AagrBONN_evm.TU.Sc2ySwM_117.2900 Anthoceros agrestis HOM05D006378 ORTHO05D007959 4.4e-86 322.4 365 46.8
SMO174G0008 Selaginella moellendorffii HOM05D006378 ORTHO05D007959 9.8e-86 321.2 354 48.3
Mapoly0113s0055 Marchantia polymorpha HOM05D006378 ORTHO05D007959 1.8e-84 317.0 354 45.8
ATR0598G254 Amborella trichopoda HOM05D006378 ORTHO05D007959 1.6e-80 303.9 352 43.8
CAN.G81.12 Capsicum annuum HOM05D006378 ORTHO05D007959 1.0e-74 284.6 267 55.4
SEGI_03485 Sequoiadendron giganteum HOM05D006378 ORTHO05D007959 1.9e-65 253.8 267 47.9
CARHR071080 Cardamine hirsuta HOM05D006378 ORTHO05D007959 9.6e-57 224.9 188 59.6
Atru.chr7.1707 Acer truncatum HOM05D006378 ORTHO05D007959 3.9e-50 203.0 142 65.5
CDE05G1577 Ceratophyllum demersum HOM05D006378 ORTHO05D007959 1.6e-40 171.0 171 52.0
CBR_g12041 Chara braunii HOM05D006378 ORTHO05D007959 2.3e-26 124.0 268 33.6
Actinidia29932 Actinidia chinensis HOM05D006378 ORTHO05D007959 9.0e-23 112.1 112 54.5
SHI02337 Sapria himalayana HOM05D006378 ORTHO05D007959 2.7e-11 73.9 94 44.7
Psat7g020000 Pisum sativum HOM05D006378 ORTHO05D007959 2.0e-09 67.8 51 62.7
SHI02339 Sapria himalayana HOM05D006378 ORTHO05D007959 2.4e-07 60.8 94 37.2
SHI02338 Sapria himalayana HOM05D006378 ORTHO05D007959 5.3e-07 59.7 65 46.2
ATR0511G001 Amborella trichopoda HOM05D006378 ORTHO05D007959 3.5e-06 57.0 84 38.1


User provided reference genes

Program Settings