Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G1305 Fragaria x ananassa HOM05D006782 ORTHO05D011275 4.5e-98 361.3 187 100.0
FAN28G0431 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.2e-97 359.0 187 98.9
FAN26G0390 Fragaria x ananassa HOM05D006782 ORTHO05D011275 5.1e-70 268.1 187 75.4
FAN14G1719 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.1e-63 246.1 175 73.1
FvH4_6g34462 Fragaria vesca HOM05D006782 ORTHO05D011275 1.4e-51 206.8 152 75.7
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.6e-47 193.4 127 85.0
FAN06G2964 Fragaria x ananassa HOM05D000020 ORTHO05D007189 2.1e-47 193.0 127 85.0
FvH4_7g23880 Fragaria vesca HOM05D000020 ORTHO05D007189 6.1e-47 191.4 127 85.0
FAN23G1515 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.8e-46 189.9 129 82.9
FAN28G0105 Fragaria x ananassa HOM05D006782 ORTHO05D001690 8.3e-44 181.0 138 68.1
FAN03G1342 Fragaria x ananassa HOM05D000020 ORTHO05D007189 1.6e-39 166.8 126 75.4
FAN06G0350 Fragaria x ananassa HOM05D006782 ORTHO05D011275 6.1e-39 164.9 109 79.8
FAN25G1405 Fragaria x ananassa HOM05D006782 ORTHO05D011275 6.1e-39 164.9 109 79.8
FAN11G3733 Fragaria x ananassa HOM05D004930 ORTHO05D006531 4.1e-35 152.1 122 72.1
FvH4_3g29702 Fragaria vesca HOM05D004930 ORTHO05D011275 1.2e-34 150.6 109 77.1
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 3.9e-33 145.6 130 69.2
FAN11G0001 Fragaria x ananassa HOM05D000008 ORTHO05D000005 3.1e-30 136.0 92 82.6
FAN17G1691 Fragaria x ananassa HOM05D006782 ORTHO05D011275 3.1e-30 136.0 105 72.4
FvH4_4g16550 Fragaria vesca HOM05D004930 ORTHO05D011275 4.0e-30 135.6 105 71.4
FAN14G2649 Fragaria x ananassa HOM05D006782 ORTHO05D011275 4.0e-30 135.6 127 64.6
FAN01G3131 Fragaria x ananassa HOM05D006782 ORTHO05D011275 8.9e-30 134.4 105 71.4
FvH4_5g19441 Fragaria vesca HOM05D006782 ORTHO05D011275 2.0e-29 133.3 101 77.2
FAN18G2750 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.0e-29 133.3 94 80.9
FAN17G0369 Fragaria x ananassa HOM05D004930 ORTHO05D011275 3.4e-29 132.5 105 69.5
FAN06G4068 Fragaria x ananassa HOM05D006782 ORTHO05D011275 5.8e-29 131.7 102 75.5
FAN09G0574 Fragaria x ananassa HOM05D006782 ORTHO05D011275 5.8e-29 131.7 94 78.7
FAN12G1707 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.2e-28 129.8 97 75.3
MD07G1213000 Malus domestica HOM05D000020 ORTHO05D007189 2.2e-28 129.8 117 59.8
Prupe.2G245200 Prunus persica HOM05D000020 ORTHO05D007189 2.9e-28 129.4 126 57.1
FAN12G1704 Fragaria x ananassa HOM05D004930 ORTHO05D006531 4.9e-28 128.6 122 62.3
FAN14G3775 Fragaria x ananassa HOM05D006782 ORTHO05D011275 4.9e-28 128.6 94 76.6
FAN19G0520 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.4e-27 127.1 97 76.3
MD01G1145800 Malus domestica HOM05D000020 ORTHO05D007189 2.4e-27 126.3 117 59.0
FAN17G1596 Fragaria x ananassa HOM05D006782 ORTHO05D011275 7.0e-27 124.8 89 75.3
FAN06G5044 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.3e-25 120.6 98 73.5
RcHm_v2.0_Chr1g0369251 Rosa chinensis HOM05D000020 ORTHO05D007189 9.5e-24 114.4 127 56.7
FAN24G1064 Fragaria x ananassa HOM05D006782 ORTHO05D011275 5.2e-22 108.6 107 65.4
CANSAT56G3422 Cannabis sativa HOM05D000020 ORTHO05D007189 7.5e-21 104.8 123 50.4
FvH4_4g06881 Fragaria vesca HOM05D006782 ORTHO05D011275 3.7e-20 102.4 106 63.2
FAN07G0282 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.4e-19 100.5 74 74.3
FAN10G3762 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.4e-19 100.5 79 72.2
FAN16G2026 Fragaria x ananassa HOM05D006782 ORTHO05D205423 1.4e-19 100.5 90 64.4
FAN11G0567 Fragaria x ananassa HOM05D006782 ORTHO05D203986 4.1e-19 99.0 70 75.7
FAN08G0293 Fragaria x ananassa HOM05D006782 ORTHO05D011275 7.1e-19 98.2 83 67.5
FAN08G0921 Fragaria x ananassa HOM05D006782 ORTHO05D011275 7.1e-19 98.2 83 67.5
FAN13G2828 Fragaria x ananassa HOM05D006782 ORTHO05D204244 7.1e-19 98.2 79 69.6
FAN18G3333 Fragaria x ananassa HOM05D006782 ORTHO05D201160 7.1e-19 98.2 90 63.3
FAN19G2580 Fragaria x ananassa HOM05D006782 ORTHO05D207724 7.1e-19 98.2 83 67.5
FAN12G3887 Fragaria x ananassa HOM05D006782 ORTHO05D203567 9.2e-19 97.8 83 67.5
FAN09G3720 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.2e-18 97.4 70 75.7
FAN11G1676 Fragaria x ananassa HOM05D010664 ORTHO05D210082 1.6e-18 97.1 61 82.0
FAN14G5237 Fragaria x ananassa HOM05D006782 ORTHO05D011275 1.6e-18 97.1 75 73.3
FAN13G1891 Fragaria x ananassa HOM05D006782 ORTHO05D009662 2.1e-18 96.7 72 73.6
FAN21G2650 Fragaria x ananassa HOM05D006782 ORTHO05D202800 2.1e-18 96.7 89 64.0
FAN18G0595 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.7e-18 96.3 85 67.1
ClCG07G003890 Citrullus lanatus HOM05D000020 ORTHO05D007189 7.8e-18 94.7 125 47.2
Ciclev10033928m.g Citrus clementina HOM05D000020 ORTHO05D007189 7.8e-18 94.7 132 49.2
FAN18G1219 Fragaria x ananassa HOM05D010664 ORTHO05D206657 1.0e-17 94.4 63 76.2
FAN26G2872 Fragaria x ananassa HOM05D006782 ORTHO05D208352 1.0e-17 94.4 75 70.7
CiPaw.01G295200 Carya illinoinensis HOM05D000020 ORTHO05D007189 1.7e-17 93.6 140 45.7
Cpa.g.sc19.225 Carica papaya HOM05D000020 ORTHO05D007189 2.3e-17 93.2 128 46.9
FAN06G2652 Fragaria x ananassa HOM05D006782 ORTHO05D032388 2.3e-17 93.2 78 69.2
FAN11G3638 Fragaria x ananassa HOM05D006782 ORTHO05D011275 2.3e-17 93.2 94 60.6
Atru.chr12.254 Acer truncatum HOM05D000020 ORTHO05D007189 3.0e-17 92.8 76 59.2
FAN01G0169 Fragaria x ananassa HOM05D006228 ORTHO05D007847 3.0e-17 92.8 49 93.9
TWI09G0809 Tripterygium wilfordii HOM05D000020 ORTHO05D007189 3.0e-17 92.8 132 47.7
FAN02G2972 Fragaria x ananassa HOM05D006782 ORTHO05D207747 3.9e-17 92.4 78 67.9
FAN10G1058 Fragaria x ananassa HOM05D006782 ORTHO05D011275 3.9e-17 92.4 75 70.7
Sabra10G0149100 Salix brachista HOM05D000020 ORTHO05D007189 3.9e-17 92.4 132 47.7
FAN02G1533 Fragaria x ananassa HOM05D006782 ORTHO05D202813 5.1e-17 92.0 75 70.7
FAN03G3266 Fragaria x ananassa HOM05D006782 ORTHO05D011275 8.6e-17 91.3 94 60.6
Medtr5g081720 Medicago truncatula HOM05D000020 ORTHO05D007189 1.9e-16 90.1 126 44.4
Sed0021137 Sechium edule HOM05D000020 ORTHO05D007189 2.5e-16 89.7 116 50.0
TWI73G0310 Tripterygium wilfordii HOM05D000020 ORTHO05D007189 2.5e-16 89.7 120 48.3
AT3G55780 Arabidopsis thaliana HOM05D000020 ORTHO05D007189 3.3e-16 89.4 115 45.2
C08p31110 Brassica napus HOM05D000020 ORTHO05D007189 3.3e-16 89.4 120 43.3
FvH4_3g12743 Fragaria vesca HOM05D004930 ORTHO05D006531 3.3e-16 89.4 75 65.3
FAN15G2232 Fragaria x ananassa HOM05D006782 ORTHO05D206330 3.3e-16 89.4 77 68.8
Lalb_Chr04g0250801 Lupinus albus HOM05D000020 ORTHO05D007189 3.3e-16 89.4 114 48.2
Actinidia29672 Actinidia chinensis HOM05D000020 ORTHO05D007189 4.3e-16 89.0 121 47.1
Thhalv10010910m.g Eutrema salsugineum HOM05D000020 ORTHO05D007189 5.6e-16 88.6 118 44.9
FAN18G0670 Fragaria x ananassa HOM05D006782 ORTHO05D011275 5.6e-16 88.6 72 68.1
BcaC07g39905 Brassica carinata HOM05D000020 ORTHO05D007189 7.3e-16 88.2 120 42.5
BolC8t50732H Brassica oleracea HOM05D000020 ORTHO05D007189 7.3e-16 88.2 120 42.5
CsaV3_5G008860 Cucumis sativus L. HOM05D000020 ORTHO05D007189 7.3e-16 88.2 119 47.1
Lsat_1_v5_gn_2_120421 Lactuca sativa HOM05D000020 ORTHO05D007189 7.3e-16 88.2 120 44.2
TAR623G0626 Trochodendron aralioides HOM05D000020 ORTHO05D007189 7.3e-16 88.2 79 51.9
Carub.0005s2257 Capsella rubella HOM05D000020 ORTHO05D007189 9.5e-16 87.8 115 45.2
Sp5g06700 Schrenkiella parvula HOM05D000020 ORTHO05D007189 9.5e-16 87.8 114 44.7
Sed0018426 Sechium edule HOM05D000020 ORTHO05D007189 9.5e-16 87.8 117 47.9
QL08p062543 Quercus lobata HOM05D000020 ORTHO05D007189 1.2e-15 87.4 122 47.5
AL5G37060 Arabidopsis lyrata HOM05D000020 ORTHO05D007189 1.6e-15 87.0 115 45.2
GSVIVG01016379001 Vitis vinifera HOM05D000020 ORTHO05D007189 1.6e-15 87.0 123 46.3
FAN11G2061 Fragaria x ananassa HOM05D006782 ORTHO05D204056 2.8e-15 86.3 75 66.7
FAN22G1259 Fragaria x ananassa HOM05D006782 ORTHO05D209502 2.8e-15 86.3 75 68.0
FAN22G2115 Fragaria x ananassa HOM05D006782 ORTHO05D201415 2.8e-15 86.3 75 68.0
Lalb_Chr10g0104971 Lupinus albus HOM05D000020 ORTHO05D007189 4.7e-15 85.5 78 53.8
Manes.07G124600 Manihot esculenta HOM05D000020 ORTHO05D007189 4.7e-15 85.5 121 43.8
Potri.010G193700 Populus trichocarpa HOM05D000020 ORTHO05D007189 6.2e-15 85.1 133 41.4
THA.LOC104810181 Tarenaya hassleriana HOM05D000020 ORTHO05D007189 6.2e-15 85.1 124 43.5
Lsat_1_v5_gn_9_63241 Lactuca sativa HOM05D000020 ORTHO05D007189 8.1e-15 84.7 118 43.2
Duzib114G0064 Durio zibethinus HOM05D000020 ORTHO05D007189 1.1e-14 84.3 118 42.4
COL.COLO4_25678 Corchorus olitorius HOM05D000020 ORTHO05D007189 1.4e-14 84.0 108 45.4
CARHR165890 Cardamine hirsuta HOM05D000020 ORTHO05D007189 1.8e-14 83.6 122 43.4
Gohir.A10G228800 Gossypium hirsutum HOM05D000020 ORTHO05D007189 1.8e-14 83.6 95 48.4
Gohir.D10G242800 Gossypium hirsutum HOM05D000020 ORTHO05D007189 1.8e-14 83.6 95 48.4
Gorai.011G279200 Gossypium raimondii HOM05D000020 ORTHO05D007189 1.8e-14 83.6 95 48.4
AUR62022832 Chenopodium quinoa HOM05D000020 ORTHO05D007189 4.0e-14 82.4 125 45.6
FAN14G1694 Fragaria x ananassa HOM05D006782 ORTHO05D204977 4.0e-14 82.4 77 66.2
HanXRQChr09g0246881 Helianthus annuus HOM05D000020 ORTHO05D007189 4.0e-14 82.4 116 43.1
Lj1P949T30 Lonicera japonica HOM05D000020 ORTHO05D007189 4.0e-14 82.4 107 48.6
BcaB01g00062 Brassica carinata HOM05D000020 ORTHO05D007189 8.9e-14 81.3 93 46.2
Aa31LG10G10770 Aethionema arabicum HOM05D000020 ORTHO05D007189 1.2e-13 80.9 121 43.8
A09p48780 Brassica napus HOM05D000020 ORTHO05D007189 1.2e-13 80.9 120 40.8
BraA09t40331Z Brassica rapa HOM05D000020 ORTHO05D007189 1.2e-13 80.9 120 40.8
Aa31LG5G19710 Aethionema arabicum HOM05D006228 ORTHO05D007847 1.5e-13 80.5 120 45.0
ECA238G3771 Erigeron canadensis HOM05D000020 ORTHO05D007189 3.4e-13 79.3 125 40.8
AUR62012199 Chenopodium quinoa HOM05D000020 ORTHO05D007189 7.6e-13 78.2 113 46.0
PGSC0003DMG400027385 Solanum tuberosum HOM05D000020 ORTHO05D007189 7.6e-13 78.2 122 44.3
PGSC0003DMG400031040 Solanum tuberosum HOM05D000020 ORTHO05D007189 7.6e-13 78.2 122 44.3
Sc11g0007320 Simmondsia chinensis HOM05D000020 ORTHO05D007189 1.7e-12 77.0 116 42.2
FAN26G0420 Fragaria x ananassa HOM05D006782 ORTHO05D035260 2.2e-12 76.6 53 81.1
MBI05_g34815_MAGBIO Magnolia biondii HOM05D000020 ORTHO05D007189 2.2e-12 76.6 120 38.3
Dinv21002 Davidia involucrata HOM05D000020 ORTHO05D007189 2.9e-12 76.3 115 40.9
Thhalv10005331m.g Eutrema salsugineum HOM05D000020 ORTHO05D007189 3.7e-12 75.9 115 41.7
Nn2g13587 Nelumbo nucifera HOM05D000020 ORTHO05D007189 3.7e-12 75.9 128 39.1
Ah.16g103070 Amaranthus hybridus HOM05D003256 ORTHO05D005659 4.9e-12 75.5 117 41.9
MBI05_g34816_MAGBIO Magnolia biondii HOM05D000020 ORTHO05D007189 4.9e-12 75.5 101 43.6
Thecc.10G027300 Theobroma cacao HOM05D000020 ORTHO05D007189 4.9e-12 75.5 124 41.1
FAN28G1242 Fragaria x ananassa HOM05D006782 ORTHO05D035260 8.4e-12 74.7 53 79.2
Thhalv10006480m.g Eutrema salsugineum HOM05D000020 ORTHO05D007189 1.1e-11 74.3 115 40.0
Gorai.013G019700 Gossypium raimondii HOM05D000020 ORTHO05D007189 1.1e-11 74.3 95 43.2
FAN12G1891 Fragaria x ananassa HOM05D006782 ORTHO05D207534 1.4e-11 73.9 50 80.0
SGA_v2.0_scaffold76G25053 Striga asiatica HOM05D000020 ORTHO05D007189 1.9e-11 73.6 121 40.5
Rhsim03G0139400 Rhododendron simsii HOM05D000020 ORTHO05D007189 2.4e-11 73.2 119 42.0
Gohir.D13G017750 Gossypium hirsutum HOM05D000020 ORTHO05D007189 3.2e-11 72.8 99 40.4
TPR.G8040 Trifolium pratense HOM05D000020 ORTHO05D007189 3.2e-11 72.8 76 47.4
EL10Ac2g04779 Beta vulgaris HOM05D000020 ORTHO05D007189 4.1e-11 72.4 98 40.8
DCAR_019006 Daucus carota HOM05D000020 ORTHO05D007189 4.1e-11 72.4 121 40.5
Psat2g036120 Pisum sativum HOM05D000020 ORTHO05D007189 5.4e-11 72.0 136 38.2
Migut.F01439 Erythranthe guttata HOM05D000020 ORTHO05D007189 1.6e-10 70.5 125 40.0
MBI05_g34810_MAGBIO Magnolia biondii HOM05D000020 ORTHO05D007189 1.6e-10 70.5 124 37.9
VMungo0647G1539 Vigna mungo HOM05D000020 ORTHO05D007189 1.6e-10 70.5 110 41.8
Cc02_g06980 Coffea canephora HOM05D000020 ORTHO05D007189 2.1e-10 70.1 113 39.8
Phvul.008G227100 Phaseolus vulgaris HOM05D000020 ORTHO05D007189 2.1e-10 70.1 114 40.4
SalBow6G4632 Salvia bowleyana HOM05D000020 ORTHO05D007189 3.5e-10 69.3 119 41.2
Thhalv10006375m.g Eutrema salsugineum HOM05D000020 ORTHO05D007189 1.0e-09 67.8 115 37.4
MBI05_g34811_MAGBIO Magnolia biondii HOM05D000020 ORTHO05D007189 1.0e-09 67.8 123 35.8
MBI05_g34808_MAGBIO Magnolia biondii HOM05D000020 ORTHO05D007189 1.3e-09 67.4 115 36.5
MBI05_g34812_MAGBIO Magnolia biondii HOM05D000020 ORTHO05D007189 1.3e-09 67.4 124 35.5
Sopen11g029900 Solanum pennellii HOM05D000020 ORTHO05D007189 1.3e-09 67.4 125 41.6
Oeu006659.1 Olea europaea HOM05D000020 ORTHO05D007189 1.7e-09 67.0 120 40.8
SalBow6G4238 Salvia bowleyana HOM05D000020 ORTHO05D007189 1.7e-09 67.0 119 42.0
Solyc11g072230.1 Solanum lycopersicum HOM05D000020 ORTHO05D007189 3.0e-09 66.2 125 40.8
Gohir.A13G016650 Gossypium hirsutum HOM05D000020 ORTHO05D007189 5.1e-09 65.5 120 35.8
Nitab4.5_0012179g0010 Nicotiana tabacum HOM05D006983 ORTHO05D007189 6.6e-09 65.1 120 36.7
A07p23410 Brassica napus HOM05D000020 ORTHO05D007189 8.6e-09 64.7 118 36.4
BraA07t30004Z Brassica rapa HOM05D000020 ORTHO05D007189 8.6e-09 64.7 118 36.4
CAN.G394.1 Capsicum annuum HOM05D000020 ORTHO05D007189 8.6e-09 64.7 119 39.5
MBI05_g34817_MAGBIO Magnolia biondii HOM05D000020 ORTHO05D007189 8.6e-09 64.7 119 36.1
MBI05_g34814_MAGBIO Magnolia biondii HOM05D000020 ORTHO05D007189 1.1e-08 64.3 124 37.1
LjContig00357g0008917 Lotus japonicus HOM05D000020 ORTHO05D007189 1.5e-08 63.9 100 35.0
vmacro19853 Vaccinium macrocarpon HOM05D000020 ORTHO05D007189 1.9e-08 63.5 78 48.7
BcaB02g07605 Brassica carinata HOM05D000020 ORTHO05D007189 2.5e-08 63.2 116 34.5
FAN17G2023 Fragaria x ananassa HOM05D011019 ORTHO05D200767 5.6e-08 62.0 41 78.0
BcaC08g44842 Brassica carinata HOM05D000020 ORTHO05D007189 9.6e-08 61.2 118 33.9
C06p24490 Brassica napus HOM05D000020 ORTHO05D007189 9.6e-08 61.2 118 33.9
BolC6t37596H Brassica oleracea HOM05D000020 ORTHO05D007189 9.6e-08 61.2 118 33.9
Nitab4.5_0000278g0220 Nicotiana tabacum HOM05D006983 ORTHO05D007189 2.8e-07 59.7 59 50.8
Aqoxy1G00735 Aquilegia oxysepala HOM05D000020 ORTHO05D007189 8.1e-07 58.2 124 33.9
Haze_07208 Corylus avellana HOM05D000020 ORTHO05D000543 8.1e-07 58.2 77 36.4
Thecc.06G150000 Theobroma cacao HOM05D000020 ORTHO05D000543 1.8e-06 57.0 79 34.2
Haze_17473 Corylus avellana HOM05D000020 ORTHO05D000543 3.1e-06 56.2 77 36.4
MBI05_g34807_MAGBIO Magnolia biondii HOM05D000020 ORTHO05D007189 3.1e-06 56.2 123 36.6
Cfa018603 Carpinus fangiana HOM05D000020 ORTHO05D000543 4.0e-06 55.8 77 36.4
Os06g0531000 Oryza sativa ssp. japonica HOM05D000020 ORTHO05D000543 4.0e-06 55.8 79 34.2
PGR044G2611 Punica granatum HOM05D000020 ORTHO05D007189 4.0e-06 55.8 103 44.7
Cfa018808 Carpinus fangiana HOM05D000020 ORTHO05D000543 6.8e-06 55.1 77 36.4


User provided reference genes

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