Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G1274 Fragaria x ananassa HOM05D013332 ORTHO05D004477 5.6e-87 324.3 173 100.0
FAN23G0907 Fragaria x ananassa HOM05D013332 ORTHO05D004477 1.1e-85 320.1 173 96.0
FAN26G3011 Fragaria x ananassa HOM05D013332 ORTHO05D004477 2.6e-84 315.5 170 98.2
FAN19G2695 Fragaria x ananassa HOM05D013332 ORTHO05D004477 5.1e-80 301.2 170 91.2
FvH4_1g20240 Fragaria vesca HOM05D013332 ORTHO05D004477 1.2e-76 290.0 170 91.8
RcHm_v2.0_Chr2g0112381 Rosa chinensis HOM05D013332 ORTHO05D004477 1.4e-74 283.1 174 83.3
CiPaw.03G145800 Carya illinoinensis HOM05D008176 ORTHO05D004477 6.1e-17 91.7 170 42.4
QL06p048130 Quercus lobata HOM05D008176 ORTHO05D004477 1.5e-15 87.0 171 41.5
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 2.8e-14 82.8 174 35.6
Atru.chr3.1344 Acer truncatum HOM05D008176 ORTHO05D004477 6.3e-14 81.6 173 38.7
COL.COLO4_27295 Corchorus olitorius HOM05D008176 ORTHO05D004477 1.1e-13 80.9 174 37.9
Peaxi162Scf00237g00201 Petunia axillaris HOM05D008176 ORTHO05D004477 1.4e-13 80.5 164 37.8
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 9.1e-13 77.8 159 37.7
Duzib187G0825 Durio zibethinus HOM05D008176 ORTHO05D004477 3.5e-12 75.9 173 39.9
Duzib264G0386 Durio zibethinus HOM05D008176 ORTHO05D004477 3.5e-12 75.9 163 39.3
Cc10_g06700 Coffea canephora HOM05D008046 ORTHO05D004477 1.3e-11 73.9 169 33.1
Manes.12G129900 Manihot esculenta HOM05D008176 ORTHO05D004477 1.3e-11 73.9 167 38.9
Solyc11g010250.1 Solanum lycopersicum HOM05D008176 ORTHO05D004477 1.3e-11 73.9 159 39.0
CiPaw.04G103600 Carya illinoinensis HOM05D008176 ORTHO05D004477 2.2e-11 73.2 171 39.2
PGSC0003DMG400016149 Solanum tuberosum HOM05D008176 ORTHO05D004477 2.2e-11 73.2 159 39.0
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.5e-10 70.5 172 37.2
Thecc.01G095600 Theobroma cacao HOM05D008176 ORTHO05D004477 2.5e-10 69.7 170 37.1
TPR.G16006 Trifolium pratense HOM05D008176 ORTHO05D004477 7.2e-10 68.2 175 34.9
Sc26g0000200 Simmondsia chinensis HOM05D013332 ORTHO05D004477 9.4e-10 67.8 156 37.8
Medtr3g086830 Medicago truncatula HOM05D008176 ORTHO05D004477 1.2e-09 67.4 177 35.6
Glyma.11G242100 Glycine max HOM05D008176 ORTHO05D004477 2.1e-09 66.6 162 34.0
Sopen05g029890 Solanum pennellii HOM05D008176 ORTHO05D004477 2.1e-09 66.6 159 37.1
Gorai.007G059700 Gossypium raimondii HOM05D008176 ORTHO05D004477 2.7e-09 66.2 183 39.9
Nitab4.5_0012818g0010 Nicotiana tabacum HOM05D008176 ORTHO05D004477 2.7e-09 66.2 162 37.0
CANSAT01G0943 Cannabis sativa HOM05D013332 ORTHO05D004477 3.6e-09 65.9 171 39.2
Haze_24851 Corylus avellana HOM05D008176 ORTHO05D004477 3.6e-09 65.9 174 37.4
Gohir.A11G051100 Gossypium hirsutum HOM05D008176 ORTHO05D004477 3.6e-09 65.9 183 39.3
Ca_08988_v3 Cicer arietinum L. HOM05D008176 ORTHO05D004477 4.7e-09 65.5 165 35.2
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.0e-08 64.3 175 34.3
Glyma.08G133100 Glycine max HOM05D008176 ORTHO05D004477 4.0e-08 62.4 167 36.5
Hma1.2p1_0019F.1_g013800 Hydrangea macrophylla HOM05D013332 ORTHO05D004477 4.0e-08 62.4 184 33.2
Aqoxy6G00716 Aquilegia oxysepala HOM05D008046 ORTHO05D004477 5.2e-08 62.0 171 38.0
Ah.02g126210 Amaranthus hybridus HOM05D031888 ORTHO05D004477 6.8e-08 61.6 185 33.0
VMungo1383G1959 Vigna mungo HOM05D008176 ORTHO05D004477 6.8e-08 61.6 159 35.8
Nitab4.5_0003888g0010 Nicotiana tabacum HOM05D013332 ORTHO05D004477 8.8e-08 61.2 108 40.7
Phvul.001G253900 Phaseolus vulgaris HOM05D008176 ORTHO05D004477 1.2e-07 60.8 177 34.5
Potri.005G072000 Populus trichocarpa HOM05D008176 ORTHO05D004477 1.5e-07 60.5 169 33.1
Glyma.05G175800 Glycine max HOM05D008176 ORTHO05D004477 2.0e-07 60.1 170 33.5
Ciclev10026640m.g Citrus clementina HOM05D008176 ORTHO05D004477 2.6e-07 59.7 170 38.2
Gohir.D11G054500 Gossypium hirsutum HOM05D008176 ORTHO05D004477 2.6e-07 59.7 187 38.0
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 2.6e-07 59.7 172 34.3
COL.COLO4_12009 Corchorus olitorius HOM05D008046 ORTHO05D004477 5.7e-07 58.5 182 30.2
Nitab4.5_0000241g0190 Nicotiana tabacum HOM05D008176 ORTHO05D004477 5.7e-07 58.5 108 39.8
EL10As13g24057 Beta vulgaris HOM05D031888 ORTHO05D004477 7.5e-07 58.2 185 31.4
Gohir.A02G129700 Gossypium hirsutum HOM05D008176 ORTHO05D004477 7.5e-07 58.2 169 30.8
Prupe.6G193200 Prunus persica HOM05D013332 ORTHO05D004477 7.5e-07 58.2 198 36.9
Sc23g0000380 Simmondsia chinensis HOM05D008046 ORTHO05D004477 7.5e-07 58.2 154 35.7
PGSC0003DMG400016792 Solanum tuberosum HOM05D008176 ORTHO05D004477 7.5e-07 58.2 159 33.3
TPR.G6203 Trifolium pratense HOM05D008176 ORTHO05D004477 9.8e-07 57.8 170 35.3
Lsat_1_v5_gn_1_3180 Lactuca sativa HOM05D008046 ORTHO05D004477 1.7e-06 57.0 165 31.5
Glyma.18G015000 Glycine max HOM05D008176 ORTHO05D004477 2.2e-06 56.6 126 36.5
DCAR_014203 Daucus carota HOM05D013332 ORTHO05D004477 2.8e-06 56.2 172 34.3
Psat5g090880 Pisum sativum HOM05D008176 ORTHO05D004477 2.8e-06 56.2 167 32.9
Nn1g05455 Nelumbo nucifera HOM05D008046 ORTHO05D004477 3.7e-06 55.8 174 32.8
PGSC0003DMG400016791 Solanum tuberosum HOM05D008176 ORTHO05D004477 4.9e-06 55.5 167 35.3
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 8.3e-06 54.7 162 33.3


User provided reference genes

Program Settings