Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.7e-94 349.4 181 100.0
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 4.5e-47 191.8 157 71.3
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 4.5e-47 191.8 157 71.3
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.0e-46 190.7 157 70.7
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.3e-46 190.3 157 70.7
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 3.3e-37 159.1 165 57.0
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 2.8e-36 156.0 173 55.5
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 2.4e-24 116.3 161 46.0
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 7.0e-24 114.8 95 67.4
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 9.2e-24 114.4 157 50.3
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 1.2e-23 114.0 166 46.4
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 4.6e-23 112.1 157 47.1
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 7.8e-23 111.3 114 54.4
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 2.3e-22 109.8 159 45.3
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 3.0e-22 109.4 97 63.9
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 3.9e-22 109.0 93 59.1
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 8.6e-22 107.8 153 45.8
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 8.6e-22 107.8 153 45.8
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 1.1e-21 107.5 165 44.8
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 2.5e-21 106.3 154 46.1
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 3.3e-21 105.9 117 53.8
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 4.3e-21 105.5 153 45.8
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 4.3e-21 105.5 153 45.8
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 4.3e-21 105.5 153 45.8
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 5.6e-21 105.1 92 59.8
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 7.3e-21 104.8 124 48.4
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 7.3e-21 104.8 119 51.3
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 9.5e-21 104.4 90 58.9
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 1.2e-20 104.0 113 51.3
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 1.6e-20 103.6 96 59.4
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 1.6e-20 103.6 171 43.9
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 2.8e-20 102.8 161 43.5
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 3.6e-20 102.4 153 43.8
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 6.2e-20 101.7 96 58.3
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 6.2e-20 101.7 167 41.3
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 6.2e-20 101.7 128 50.0
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 8.1e-20 101.3 92 60.9
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 8.1e-20 101.3 90 57.8
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 1.4e-19 100.5 130 48.5
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 1.4e-19 100.5 161 42.9
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 1.8e-19 100.1 169 40.8
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 1.8e-19 100.1 93 55.9
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 1.8e-19 100.1 93 55.9
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 1.8e-19 100.1 101 54.5
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 3.1e-19 99.4 166 44.6
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 3.1e-19 99.4 153 43.1
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 6.8e-19 98.2 168 39.9
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 6.8e-19 98.2 88 58.0
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 2.0e-18 96.7 151 41.1
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 2.0e-18 96.7 151 41.1
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 2.6e-18 96.3 143 46.9
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 2.6e-18 96.3 168 40.5
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 3.4e-18 95.9 140 41.4
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 5.8e-18 95.1 90 55.6
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 7.5e-18 94.7 119 44.5
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 9.9e-18 94.4 150 42.0
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 1.3e-17 94.0 90 55.6
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 1.7e-17 93.6 141 41.8
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 2.2e-17 93.2 141 42.6
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 2.9e-17 92.8 78 59.0
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 2.9e-17 92.8 166 39.8
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 3.7e-17 92.4 88 53.4
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 3.7e-17 92.4 103 50.5
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 4.9e-17 92.0 83 59.0
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 4.9e-17 92.0 76 61.8
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 6.4e-17 91.7 75 66.7
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 6.4e-17 91.7 118 45.8
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 8.3e-17 91.3 68 66.2
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 8.3e-17 91.3 72 63.9
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 1.9e-16 90.1 81 56.8
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 3.2e-16 89.4 96 51.0
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 3.2e-16 89.4 78 59.0
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 4.1e-16 89.0 88 52.3
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 5.4e-16 88.6 128 49.2
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 7.1e-16 88.2 116 48.3
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 7.1e-16 88.2 101 48.5
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 9.2e-16 87.8 71 62.0
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 2.1e-15 86.7 93 52.7
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 2.7e-15 86.3 166 36.7
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 3.5e-15 85.9 79 58.2
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 4.6e-15 85.5 159 40.9
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 6.0e-15 85.1 49 75.5
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 7.8e-15 84.7 153 37.3
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 7.8e-15 84.7 85 54.1
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 7.8e-15 84.7 130 40.0
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 2.3e-14 83.2 116 42.2
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 3.0e-14 82.8 48 72.9
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 3.9e-14 82.4 76 53.9
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 8.6e-14 81.3 145 40.0
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 4.3e-13 79.0 93 48.4
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 7.3e-13 78.2 92 47.8
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 1.2e-12 77.4 75 52.0
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 1.2e-12 77.4 86 43.0
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 2.1e-12 76.6 172 36.6
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 1.1e-11 74.3 141 34.8
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 2.4e-11 73.2 51 60.8
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 3.4e-10 69.3 90 41.1
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 4.4e-10 68.9 52 61.5
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 1.9e-08 63.5 107 37.4


User provided reference genes

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