Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 0.0e+00 1113.6 572 100.0
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.6e-290 1001.5 574 91.5
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.3e-286 988.4 573 91.3
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 1.5e-285 985.7 573 91.3
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 5.6e-285 983.8 575 90.6
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 7.4e-269 930.2 576 87.5
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 1.2e-221 773.5 588 71.9
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 5.0e-140 502.3 597 52.3
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 1.4e-105 387.9 599 44.1
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 3.1e-89 333.6 578 40.3
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 5.4e-70 269.6 655 34.5
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 1.3e-63 248.4 587 34.8
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 1.3e-63 248.4 568 34.3
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 2.4e-62 244.2 641 32.8
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 3.5e-61 240.4 572 33.2
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 6.6e-60 236.1 647 31.4
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 1.9e-59 234.6 616 33.1
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 4.8e-58 229.9 739 29.2
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.4e-57 228.4 644 30.9
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.2e-56 225.3 633 32.5
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 5.4e-54 216.5 639 32.4
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 1.6e-53 214.9 580 32.1
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 1.1e-51 208.8 642 32.4
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 5.6e-51 206.5 642 31.5
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 1.1e-49 202.2 598 31.1
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 1.3e-47 195.3 434 35.9
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 1.3e-47 195.3 662 28.7
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 1.7e-47 194.9 600 30.2
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 4.2e-46 190.3 640 28.8
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 1.6e-45 188.3 628 30.1
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 6.7e-44 183.0 654 28.9
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 7.4e-43 179.5 704 29.0
MD02G1078500 Malus domestica HOM05D006771 ORTHO05D008296 1.3e-42 178.7 264 44.3
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 4.8e-42 176.8 473 32.6
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 6.2e-42 176.4 634 28.4
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 9.0e-41 172.6 727 27.8
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 4.5e-40 170.2 684 27.0
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 4.9e-39 166.8 318 37.7
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 1.1e-38 165.6 406 31.8
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 1.9e-38 164.9 679 26.4
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 3.2e-38 164.1 658 28.3
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 6.7e-36 156.4 579 28.7
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 3.3e-35 154.1 451 31.5
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 2.4e-33 147.9 649 27.3
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 4.1e-33 147.1 485 29.9
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 4.1e-33 147.1 476 29.2
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 5.3e-33 146.7 377 32.1
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 6.9e-33 146.4 674 26.3
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 6.9e-33 146.4 684 27.5
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 1.2e-32 145.6 586 25.6
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 1.2e-32 145.6 655 26.4
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.5e-32 145.2 297 37.7
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 2.0e-32 144.8 379 31.9
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 4.5e-32 143.7 374 31.6
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 4.5e-32 143.7 672 26.2
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 5.8e-32 143.3 551 28.3
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 1.0e-31 142.5 667 26.4
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 1.3e-31 142.1 288 37.8
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.7e-31 141.7 288 37.8
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 1.7e-31 141.7 698 24.9
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 2.9e-31 141.0 643 26.4
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 1.9e-30 138.3 290 34.8
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 4.2e-30 137.1 401 31.2
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 1.1e-27 129.0 553 24.8
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 1.9e-27 128.3 184 41.8
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 2.5e-27 127.9 152 42.8
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 2.5e-27 127.9 613 26.8
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 7.4e-27 126.3 186 41.9
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 9.7e-27 125.9 152 43.4
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.3e-26 125.6 107 57.0
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 1.6e-26 125.2 209 34.4
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 1.6e-26 125.2 153 45.8
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 3.7e-26 124.0 798 23.7
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 4.8e-26 123.6 374 32.9
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 1.1e-25 122.5 786 24.9
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 2.4e-25 121.3 196 41.8
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 5.3e-25 120.2 585 26.5
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 2.0e-24 118.2 282 31.9
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 3.4e-24 117.5 188 40.4
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 3.4e-24 117.5 173 40.5
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 4.5e-24 117.1 413 28.8
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 7.7e-24 116.3 597 27.1
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 6.5e-23 113.2 581 28.2
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 8.5e-23 112.8 286 32.9
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 1.9e-22 111.7 596 23.7
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 1.2e-21 109.0 585 25.8
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 2.1e-21 108.2 604 24.8
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 4.6e-21 107.1 186 37.6
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 6.1e-21 106.7 599 24.9
Cpa.g.sc93.24 Carica papaya HOM05D006771 ORTHO05D008296 2.3e-20 104.8 539 25.8
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 1.3e-18 99.0 352 30.4
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 3.7e-18 97.4 598 25.9
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 3.7e-18 97.4 573 23.6
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 4.8e-18 97.1 596 26.5
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 8.2e-18 96.3 570 26.0
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 1.1e-17 95.9 435 26.9
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 1.4e-17 95.5 572 25.9
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 5.3e-17 93.6 150 38.0
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.3e-15 89.0 147 36.7
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.3e-15 89.0 147 36.7
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 2.2e-15 88.2 140 35.7
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 2.9e-15 87.8 289 28.7
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 1.2e-13 82.4 80 48.8
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 1.6e-13 82.0 140 35.0
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 1.1e-11 75.9 119 31.1
Cc06_g11350 Coffea canephora HOM05D006771 ORTHO05D008296 1.5e-11 75.5 148 34.5
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 3.3e-11 74.3 237 27.4
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 3.3e-11 74.3 131 32.1
SEGI_24756 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 7.0e-09 66.6 126 32.5
AUR62033982 Chenopodium quinoa HOM05D006771 ORTHO05D008296 1.2e-08 65.9 78 46.2
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 1.3e-07 62.4 93 41.9
Sopen07g017540 Solanum pennellii HOM05D006771 ORTHO05D008296 2.9e-07 61.2 355 25.1
CBR_g20330 Chara braunii HOM05D006771 ORTHO05D008296 1.5e-06 58.9 146 26.7


User provided reference genes

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