Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 5.4e-44 180.6 94 100.0
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 1.9e-41 172.2 92 96.7
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.9e-41 172.2 94 95.7
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 3.3e-41 171.4 92 95.7
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 9.6e-41 169.9 91 95.6
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 2.2e-37 158.7 97 88.7
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 7.1e-28 127.1 92 75.0
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 5.1e-26 120.9 94 74.5
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 1.9e-25 119.0 91 70.3
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 5.6e-25 117.5 93 75.3
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 2.1e-24 115.5 92 68.5
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 4.8e-24 114.4 96 69.8
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 4.8e-24 114.4 90 70.0
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 1.1e-23 113.2 91 70.3
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 1.1e-23 113.2 91 68.1
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 3.1e-23 111.7 95 65.3
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 3.1e-23 111.7 91 70.3
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 1.5e-22 109.4 92 71.7
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 1.5e-22 109.4 92 71.7
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 1.5e-22 109.4 88 70.5
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 3.4e-22 108.2 90 67.8
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 4.5e-22 107.8 91 63.7
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 7.6e-22 107.1 90 67.8
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 7.6e-22 107.1 90 67.8
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 1.3e-21 106.3 90 67.8
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 1.3e-21 106.3 97 62.9
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 2.2e-21 105.5 90 65.6
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 3.8e-21 104.8 91 61.5
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 3.8e-21 104.8 94 66.0
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 4.9e-21 104.4 90 66.7
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 6.5e-21 104.0 90 61.1
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 6.5e-21 104.0 91 67.0
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 6.5e-21 104.0 89 61.8
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 1.9e-20 102.4 90 66.7
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 4.2e-20 101.3 90 60.0
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 4.2e-20 101.3 90 60.0
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 5.5e-20 100.9 89 61.8
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 7.1e-20 100.5 91 62.6
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 9.3e-20 100.1 92 63.0
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 9.3e-20 100.1 90 63.3
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 1.6e-19 99.4 89 62.9
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 1.6e-19 99.4 89 60.7
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 1.6e-19 99.4 91 60.4
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 2.7e-19 98.6 100 59.0
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 3.5e-19 98.2 92 59.8
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 3.5e-19 98.2 91 60.4
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 6.0e-19 97.4 95 57.9
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 1.0e-18 96.7 81 64.2
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 1.0e-18 96.7 91 59.3
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 1.3e-18 96.3 89 61.8
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 1.8e-18 95.9 91 64.8
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 3.0e-18 95.1 96 60.4
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 5.1e-18 94.4 88 64.8
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 5.1e-18 94.4 88 64.8
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 3.3e-17 91.7 88 62.5
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 4.3e-17 91.3 91 59.3
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 5.7e-17 90.9 98 57.1
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 5.7e-17 90.9 89 58.4
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 1.3e-16 89.7 97 55.7
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.8e-16 88.6 87 60.9
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 4.8e-16 87.8 96 56.2
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.4e-15 86.3 89 57.3
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 1.8e-15 85.9 91 57.1
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 4.1e-15 84.7 69 69.6
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 4.1e-15 84.7 57 82.5
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 5.3e-15 84.3 81 59.3
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 1.5e-14 82.8 86 53.5
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 2.0e-14 82.4 67 68.7
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 2.6e-14 82.0 89 56.2
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 5.9e-14 80.9 94 51.1
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 5.9e-14 80.9 90 53.3
Eucgr.H04722 Eucalyptus grandis HOM05D007889 ORTHO05D009987 1.0e-13 80.1 98 54.1
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.3e-13 79.7 91 49.5
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 6.1e-11 70.9 80 56.2
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 1.3e-08 63.2 49 71.4
Nn5g29873 Nelumbo nucifera HOM05D007889 ORTHO05D009987 3.1e-07 58.5 85 43.5
TAR381G0304 Trochodendron aralioides HOM05D007889 ORTHO05D009987 4.1e-07 58.2 87 47.1


User provided reference genes

Program Settings