Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G0924 Fragaria x ananassa HOM05D000371 ORTHO05D003573 4.2e-87 324.7 171 100.0
FAN26G1706 Fragaria x ananassa HOM05D000371 ORTHO05D003573 1.6e-57 226.5 124 96.0
FAN23G0210 Fragaria x ananassa HOM05D000371 ORTHO05D003573 4.6e-57 224.9 124 93.5
FvH4_1g21630 Fragaria vesca HOM05D000371 ORTHO05D003573 1.7e-56 223.0 124 92.7
FAN19G3171 Fragaria x ananassa HOM05D000371 ORTHO05D003573 2.3e-56 222.6 124 92.7
RcHm_v2.0_Chr2g0115501 Rosa chinensis HOM05D000371 ORTHO05D003573 5.2e-45 184.9 125 80.8
Prupe.6G179400 Prunus persica HOM05D000371 ORTHO05D003573 1.6e-33 146.7 132 63.6
Cfa002717 Carpinus fangiana HOM05D000371 ORTHO05D003573 3.4e-28 129.0 134 54.5
MD15G1328100 Malus domestica HOM05D000371 ORTHO05D003573 1.4e-26 123.6 92 65.2
Haze_24993 Corylus avellana HOM05D000371 ORTHO05D003573 3.2e-26 122.5 135 52.6
Thhalv10026198m.g Eutrema salsugineum HOM05D000371 ORTHO05D003573 4.2e-26 122.1 128 51.6
CiPaw.04G095600 Carya illinoinensis HOM05D000371 ORTHO05D003573 2.1e-25 119.8 138 51.4
Thecc.01G107300 Theobroma cacao HOM05D000371 ORTHO05D003573 2.7e-25 119.4 128 53.9
TAR376G0781 Trochodendron aralioides HOM05D000371 ORTHO05D003573 1.0e-24 117.5 130 53.8
Gohir.D11G224900 Gossypium hirsutum HOM05D000371 ORTHO05D003573 2.3e-24 116.3 128 52.3
Gorai.007G242100 Gossypium raimondii HOM05D000371 ORTHO05D003573 2.3e-24 116.3 128 52.3
AL7G11910 Arabidopsis lyrata HOM05D000371 ORTHO05D003573 3.0e-24 115.9 129 48.1
QL06p050463 Quercus lobata HOM05D000371 ORTHO05D003573 3.0e-24 115.9 130 53.1
TAR376G0231 Trochodendron aralioides HOM05D000371 ORTHO05D003573 5.1e-24 115.2 130 53.1
Cpa.g.sc231.3 Carica papaya HOM05D000371 ORTHO05D003573 6.7e-24 114.8 135 50.4
COL.COLO4_11054 Corchorus olitorius HOM05D000371 ORTHO05D003573 8.7e-24 114.4 133 52.6
Gohir.A11G199300 Gossypium hirsutum HOM05D000371 ORTHO05D003573 1.1e-23 114.0 128 51.6
AT4G39710 Arabidopsis thaliana HOM05D000371 ORTHO05D003573 1.9e-23 113.2 129 48.1
MELO3C007778.2 Cucumis melo HOM05D000371 ORTHO05D003573 2.5e-23 112.8 116 52.6
GSVIVG01022183001 Vitis vinifera HOM05D000371 ORTHO05D003573 2.5e-23 112.8 129 51.9
Nn1g05260 Nelumbo nucifera HOM05D000371 ORTHO05D003573 3.3e-23 112.5 129 46.5
Duzib264G1096 Durio zibethinus HOM05D000371 ORTHO05D003573 4.3e-23 112.1 127 49.6
Dinv16317 Davidia involucrata HOM05D000371 ORTHO05D003573 5.6e-23 111.7 127 55.1
BcaNung05544 Brassica carinata HOM05D000371 ORTHO05D003573 1.3e-22 110.5 185 41.6
ClCG01G018990 Citrullus lanatus HOM05D000371 ORTHO05D003573 1.3e-22 110.5 74 68.9
Peaxi162Scf00204g00097 Petunia axillaris HOM05D000371 ORTHO05D003573 1.3e-22 110.5 129 49.6
PGR004G2425 Punica granatum HOM05D000371 ORTHO05D003573 1.3e-22 110.5 124 48.4
CARHR247010 Cardamine hirsuta HOM05D000371 ORTHO05D003573 1.6e-22 110.2 129 47.3
Sp7g36180 Schrenkiella parvula HOM05D000371 ORTHO05D003573 2.8e-22 109.4 134 49.3
CsaV3_6G045680 Cucumis sativus L. HOM05D000371 ORTHO05D003573 3.7e-22 109.0 74 67.6
Duzib147G0218 Durio zibethinus HOM05D000371 ORTHO05D003573 3.7e-22 109.0 127 48.0
Aa31LG6G15550 Aethionema arabicum HOM05D000371 ORTHO05D003573 6.2e-22 108.2 123 51.2
Eucgr.I00381 Eucalyptus grandis HOM05D000371 ORTHO05D003573 1.1e-21 107.5 147 47.6
CSS0002133 Camellia sinensis var. sinensis HOM05D000371 ORTHO05D003573 1.4e-21 107.1 129 51.9
Carub.0007s0159 Capsella rubella HOM05D000371 ORTHO05D003573 1.8e-21 106.7 126 47.6
Manes.13G090300 Manihot esculenta HOM05D000371 ORTHO05D003573 2.4e-21 106.3 153 43.1
TWI77G0598 Tripterygium wilfordii HOM05D000371 ORTHO05D003573 2.4e-21 106.3 125 50.4
A01p00600 Brassica napus HOM05D000371 ORTHO05D003573 3.1e-21 105.9 74 60.8
BraA01t00068Z Brassica rapa HOM05D000371 ORTHO05D003573 3.1e-21 105.9 74 60.8
MBI02_g19401_MAGBIO Magnolia biondii HOM05D000371 ORTHO05D003573 3.1e-21 105.9 111 45.9
CANSAT01G2977 Cannabis sativa HOM05D000371 ORTHO05D003573 4.0e-21 105.5 129 49.6
Solyc04g054520.3 Solanum lycopersicum HOM05D000371 ORTHO05D003573 5.3e-21 105.1 125 45.6
Sopen04g024340 Solanum pennellii HOM05D000371 ORTHO05D003573 5.3e-21 105.1 125 45.6
C01p00740 Brassica napus HOM05D000371 ORTHO05D003573 6.9e-21 104.8 74 59.5
BolC1t00076H Brassica oleracea HOM05D000371 ORTHO05D003573 6.9e-21 104.8 74 59.5
Ciclev10027543m.g Citrus clementina HOM05D000371 ORTHO05D003573 6.9e-21 104.8 73 65.8
Cc07_g15630 Coffea canephora HOM05D000371 ORTHO05D003573 9.0e-21 104.4 179 38.0
Oeu028402.1 Olea europaea HOM05D000371 ORTHO05D003573 2.0e-20 103.2 108 52.8
PGSC0003DMG400022039 Solanum tuberosum HOM05D000371 ORTHO05D003573 2.6e-20 102.8 125 44.8
Sed0019790 Sechium edule HOM05D000371 ORTHO05D003573 5.8e-20 101.7 125 48.0
BcaNung00893 Brassica carinata HOM05D000371 ORTHO05D003573 7.6e-20 101.3 130 44.6
Atru.chr4.246 Acer truncatum HOM05D000371 ORTHO05D003573 1.0e-19 100.9 162 42.0
Nitab4.5_0000214g0120 Nicotiana tabacum HOM05D000371 ORTHO05D003573 1.3e-19 100.5 125 44.0
PSO133G0088 Papaver somniferum HOM05D000371 ORTHO05D003573 1.3e-19 100.5 126 45.2
Nitab4.5_0000518g0080 Nicotiana tabacum HOM05D000371 ORTHO05D003573 6.5e-19 98.2 182 39.0
Potri.005G079700 Populus trichocarpa HOM05D000371 ORTHO05D003573 6.5e-19 98.2 126 48.4
Sabra05G0065400 Salix brachista HOM05D000371 ORTHO05D003573 8.4e-19 97.8 128 46.9
CAN.G727.3 Capsicum annuum HOM05D000371 ORTHO05D003573 1.4e-18 97.1 128 40.6
Lj4g0009095 Lotus japonicus HOM05D000371 ORTHO05D003573 1.9e-18 96.7 107 49.5
PSO541G6279 Papaver somniferum HOM05D000371 ORTHO05D003573 1.9e-18 96.7 144 42.4
CANSAT56G3388 Cannabis sativa HOM05D007808 ORTHO05D009895 3.2e-18 95.9 122 45.1
ECA246G2647 Erigeron canadensis HOM05D000371 ORTHO05D003573 5.5e-18 95.1 74 63.5
Hma1.2p1_0011F.1_g007100 Hydrangea macrophylla HOM05D000371 ORTHO05D003573 9.3e-18 94.4 138 45.7
Lsat_1_v5_gn_5_41561 Lactuca sativa HOM05D000371 ORTHO05D003573 1.2e-17 94.0 125 45.6
arahy.Tifrunner.gnm1.ann1.X3NPJM Arachis hypogaea HOM05D000371 ORTHO05D003573 2.7e-17 92.8 108 46.3
arahy.Tifrunner.gnm1.ann1.ZYU4S1 Arachis hypogaea HOM05D000371 ORTHO05D003573 2.7e-17 92.8 108 46.3
ATR0564G254 Amborella trichopoda HOM05D000371 ORTHO05D003573 4.6e-17 92.0 180 38.9
vmacro12938 Vaccinium macrocarpon HOM05D000371 ORTHO05D003573 6.0e-17 91.7 130 43.8
DCAR_014246 Daucus carota HOM05D000371 ORTHO05D003573 2.3e-16 89.7 88 53.4
Ca_17712_v3 Cicer arietinum L. HOM05D000371 ORTHO05D003573 3.9e-16 89.0 74 51.4
unitig_747.g21822 Utricularia gibba HOM05D000371 ORTHO05D003573 3.9e-16 89.0 106 45.3
Lj4A883G25 Lonicera japonica HOM05D000371 ORTHO05D003573 5.1e-16 88.6 120 43.3
Psat7g053080 Pisum sativum HOM05D000371 ORTHO05D003573 6.7e-16 88.2 101 44.6
Actinidia10887 Actinidia chinensis HOM05D000371 ORTHO05D003573 8.7e-16 87.8 121 49.6
Lalb_Chr07g0184971 Lupinus albus HOM05D000371 ORTHO05D003573 1.1e-15 87.4 102 44.1
SalBow5G1508 Salvia bowleyana HOM05D000371 ORTHO05D003573 1.1e-15 87.4 71 57.7
SalBow5G3726 Salvia bowleyana HOM05D000371 ORTHO05D003573 1.1e-15 87.4 71 57.7
Lj4C880G13 Lonicera japonica HOM05D000371 ORTHO05D003573 1.5e-15 87.0 119 45.4
Medtr8g091410 Medicago truncatula HOM05D000371 ORTHO05D003573 1.9e-15 86.7 98 43.9
Glyma.08G139100 Glycine max HOM05D000371 ORTHO05D003573 3.3e-15 85.9 153 35.9
AUR62002037 Chenopodium quinoa HOM05D000371 ORTHO05D003573 7.4e-15 84.7 82 54.9
HanXRQChr02g0041131 Helianthus annuus HOM05D000371 ORTHO05D003573 9.6e-15 84.3 122 44.3
Rhsim10G0156600 Rhododendron simsii HOM05D000371 ORTHO05D003573 9.6e-15 84.3 176 37.5
AUR62003760 Chenopodium quinoa HOM05D000371 ORTHO05D003573 1.3e-14 84.0 82 53.7
Phvul.002G262400 Phaseolus vulgaris HOM05D000371 ORTHO05D003573 2.8e-14 82.8 154 38.3
VMungo0251G3192 Vigna mungo HOM05D000371 ORTHO05D003573 2.8e-14 82.8 155 37.4
Migut.L00100 Erythranthe guttata HOM05D000371 ORTHO05D003573 6.2e-14 81.6 129 41.9
Os02g0751600 Oryza sativa ssp. japonica HOM05D000371 ORTHO05D003573 6.2e-14 81.6 127 40.9
MSTRG.3797 Avicennia marina HOM05D000371 ORTHO05D003573 8.2e-14 81.3 127 41.7
EL10Ac6g15067 Beta vulgaris HOM05D000371 ORTHO05D003573 8.2e-14 81.3 133 42.1
Aqoxy6G00548 Aquilegia oxysepala HOM05D000371 ORTHO05D003573 1.4e-13 80.5 58 58.6
TPR.G2221 Trifolium pratense HOM05D000371 ORTHO05D003573 1.8e-13 80.1 98 41.8
PSO541G3535 Papaver somniferum HOM05D000371 ORTHO05D003573 3.1e-13 79.3 97 47.4
Zm00001eb255120 Zea mays HOM05D000371 ORTHO05D003573 3.1e-13 79.3 129 38.0
Nn5g29005 Nelumbo nucifera HOM05D002551 ORTHO05D002832 2.1e-09 66.6 52 55.8
FAN17G0783 Fragaria x ananassa HOM05D000094 ORTHO05D003883 1.9e-07 60.1 59 64.4
SEGI_04974 Sequoiadendron giganteum HOM05D000371 ORTHO05D003573 8.2e-06 54.7 84 34.5


User provided reference genes

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