Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G0561 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.3e-213 746.1 386 100.0
FvH4_1g00730 Fragaria vesca HOM05D007038 ORTHO05D008893 5.6e-196 687.6 386 93.8
FAN23G2273 Fragaria x ananassa HOM05D007038 ORTHO05D008893 9.9e-185 650.2 409 86.3
FAN23G1724 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.3e-181 639.8 414 84.8
RcHm_v2.0_Chr2g0085451 Rosa chinensis HOM05D007038 ORTHO05D008893 1.1e-180 636.7 385 87.3
MD15G1150700 Malus domestica HOM05D007038 ORTHO05D008893 9.4e-151 537.3 390 72.1
FAN26G1014 Fragaria x ananassa HOM05D007038 ORTHO05D008893 2.1e-150 536.2 385 76.6
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 3.3e-148 528.9 388 71.6
QL02p093776 Quercus lobata HOM05D007038 ORTHO05D008893 3.5e-137 492.3 388 67.3
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 4.8e-131 471.9 383 65.0
CiPaw.16G107900 Carya illinoinensis HOM05D007038 ORTHO05D008893 2.9e-128 462.6 386 66.1
Manes.06G033300 Manihot esculenta HOM05D007038 ORTHO05D008893 2.5e-127 459.5 380 63.2
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 1.0e-125 454.1 377 64.5
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 9.8e-124 447.6 376 61.2
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 4.1e-122 442.2 380 61.6
Dinv42838 Davidia involucrata HOM05D007038 ORTHO05D008893 1.0e-120 437.6 386 60.1
CANSAT11G2324 Cannabis sativa HOM05D007038 ORTHO05D008893 2.3e-117 426.4 372 59.7
Dinv43261 Davidia involucrata HOM05D007038 ORTHO05D008893 1.2e-116 424.1 375 60.3
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 1.2e-116 424.1 385 59.0
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 2.6e-116 422.9 388 58.2
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 3.4e-116 422.5 392 57.1
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 4.4e-116 422.2 393 59.5
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 2.2e-115 419.9 381 59.3
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 3.7e-115 419.1 380 58.2
Actinidia23561 Actinidia chinensis HOM05D007038 ORTHO05D008893 4.9e-115 418.7 395 59.5
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 8.3e-115 417.9 383 58.7
Gorai.013G241400 Gossypium raimondii HOM05D007038 ORTHO05D008893 2.4e-114 416.4 380 57.6
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 3.2e-114 416.0 383 57.4
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 9.2e-114 414.5 392 58.9
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 2.0e-113 413.3 382 60.5
Gohir.A13G206700 Gossypium hirsutum HOM05D007038 ORTHO05D008893 4.6e-113 412.1 380 57.4
TAR626G0465 Trochodendron aralioides HOM05D007038 ORTHO05D008893 1.3e-112 410.6 378 60.1
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 3.0e-112 409.5 384 57.3
Sabra06G0139000 Salix brachista HOM05D007038 ORTHO05D008893 6.6e-112 408.3 476 49.2
Sed0007561 Sechium edule HOM05D007038 ORTHO05D008893 4.4e-108 395.6 384 55.5
PGR102G3121 Punica granatum HOM05D007038 ORTHO05D008893 2.9e-107 392.9 388 55.2
C02p13780 Brassica napus HOM05D007038 ORTHO05D008893 2.4e-106 389.8 382 53.4
BolC2t07497H Brassica oleracea HOM05D007038 ORTHO05D008893 2.4e-106 389.8 382 53.4
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 7.0e-106 388.3 383 55.9
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 1.2e-105 387.5 365 57.8
Thhalv10015603m.g Eutrema salsugineum HOM05D007038 ORTHO05D008893 7.8e-105 384.8 384 53.4
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 1.9e-103 380.2 382 57.6
Eucgr.C02504 Eucalyptus grandis HOM05D007038 ORTHO05D008893 2.5e-103 379.8 383 55.4
CARHR271660 Cardamine hirsuta HOM05D007038 ORTHO05D008893 2.1e-102 376.7 396 52.0
ECA234G0501 Erigeron canadensis HOM05D007038 ORTHO05D008893 2.1e-102 376.7 386 54.9
Lsat_1_v5_gn_5_89520 Lactuca sativa HOM05D007038 ORTHO05D008893 2.1e-102 376.7 390 55.6
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 2.8e-102 376.3 392 52.3
AL8G33930 Arabidopsis lyrata HOM05D007038 ORTHO05D008893 3.6e-102 375.9 390 52.6
THA.LOC104811831 Tarenaya hassleriana HOM05D007038 ORTHO05D008893 6.2e-102 375.2 384 53.6
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 1.1e-101 374.4 414 50.7
AT5G57880 Arabidopsis thaliana HOM05D007038 ORTHO05D008893 5.8e-100 368.6 390 52.6
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 7.5e-100 368.2 434 50.7
Sc14g0000940 Simmondsia chinensis HOM05D007038 ORTHO05D008893 1.7e-99 367.1 379 50.9
Cpa.g.sc46.174 Carica papaya HOM05D007038 ORTHO05D008893 2.2e-99 366.7 386 53.4
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 8.3e-99 364.8 418 51.4
ClCG02G014390 Citrullus lanatus HOM05D007038 ORTHO05D008893 1.1e-98 364.4 412 50.2
Duzib150G1077 Durio zibethinus HOM05D007038 ORTHO05D008893 1.4e-98 364.0 376 53.7
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 1.2e-97 360.9 433 48.3
A10p15240 Brassica napus HOM05D007038 ORTHO05D008893 3.5e-97 359.4 416 48.6
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 6.0e-97 358.6 369 54.2
BcaC04g19921 Brassica carinata HOM05D007038 ORTHO05D008893 3.9e-96 355.9 436 47.7
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 5.1e-96 355.5 352 57.4
Ciclev10009099m.g Citrus clementina HOM05D007038 ORTHO05D008893 7.3e-95 351.7 306 62.1
EL10Ac8g18937 Beta vulgaris HOM05D007038 ORTHO05D008893 1.4e-93 347.4 376 49.5
Aa31LG3G13710 Aethionema arabicum HOM05D007038 ORTHO05D008893 1.8e-93 347.1 392 49.2
BcaB05g22382 Brassica carinata HOM05D007038 ORTHO05D008893 6.8e-93 345.1 404 48.5
BraA10t43606Z Brassica rapa HOM05D007038 ORTHO05D008893 8.9e-93 344.7 408 47.8
HanXRQChr16g0520471 Helianthus annuus HOM05D007038 ORTHO05D008893 1.5e-92 344.0 454 46.3
C09p49760 Brassica napus HOM05D007038 ORTHO05D008893 3.4e-92 342.8 398 48.7
A02p08130 Brassica napus HOM05D007038 ORTHO05D008893 1.3e-91 340.9 382 48.4
BraA02t05887Z Brassica rapa HOM05D007038 ORTHO05D008893 2.2e-91 340.1 381 48.6
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 3.8e-91 339.3 325 56.0
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 2.4e-90 336.7 383 49.6
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 9.2e-90 334.7 336 52.4
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 3.3e-87 326.2 411 47.2
HanXRQChr16g0520451 Helianthus annuus HOM05D007038 ORTHO05D008893 9.6e-87 324.7 351 51.0
SalBow1G2783 Salvia bowleyana HOM05D007038 ORTHO05D008893 6.2e-86 322.0 406 48.0
Thecc.09G151200 Theobroma cacao HOM05D007038 ORTHO05D008893 9.0e-85 318.2 294 57.1
BolC9t57827H Brassica oleracea HOM05D007038 ORTHO05D008893 1.5e-84 317.4 450 43.1
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 1.9e-82 310.5 326 53.7
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 1.9e-82 310.5 326 53.7
Cc06_g14750 Coffea canephora HOM05D007038 ORTHO05D008893 6.6e-80 302.0 348 49.1
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 5.6e-79 298.9 391 44.0
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 5.6e-79 298.9 315 52.7
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 2.8e-78 296.6 341 51.0
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 1.8e-77 293.9 369 48.5
Nitab4.5_0002724g0040 Nicotiana tabacum HOM05D007038 ORTHO05D008893 1.5e-76 290.8 476 39.7
Os08g0555800 Oryza sativa ssp. japonica HOM05D007038 ORTHO05D008893 2.2e-75 287.0 380 44.5
Zm00001eb180360 Zea mays HOM05D007038 ORTHO05D008893 3.3e-71 273.1 380 43.9
Gohir.D13G211300 Gossypium hirsutum HOM05D007038 ORTHO05D008893 1.6e-62 244.2 295 46.8
AUR62025344 Chenopodium quinoa HOM05D007038 ORTHO05D008893 2.8e-62 243.4 381 40.2
AUR62028347 Chenopodium quinoa HOM05D007038 ORTHO05D008893 4.8e-62 242.7 381 40.4
Potri.006G182301 Populus trichocarpa HOM05D007038 ORTHO05D008893 1.5e-60 237.7 195 60.0
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 2.4e-53 213.8 437 36.4
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 3.2e-50 203.4 201 52.2
unitig_46.g18476 Utricularia gibba HOM05D007038 ORTHO05D008893 8.8e-48 195.3 279 44.4
CsaV3_2G007610 Cucumis sativus L. HOM05D007038 ORTHO05D008893 1.7e-46 191.0 298 42.6
Peaxi162Scf00401g00327 Petunia axillaris HOM05D007038 ORTHO05D008893 3.4e-44 183.3 146 63.0
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 4.2e-42 176.4 184 50.5
Peaxi162Scf00401g00326 Petunia axillaris HOM05D007038 ORTHO05D008893 1.1e-37 161.8 173 53.2
Solyc07g005800.2 Solanum lycopersicum HOM05D007038 ORTHO05D008893 1.4e-37 161.4 162 56.2
Potri.006G182201 Populus trichocarpa HOM05D007038 ORTHO05D008893 1.0e-35 155.2 118 69.5
Hma1.2p1_0222F.1_g093710 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 2.7e-25 120.6 83 72.3
Hma1.2p1_0222F.1_g093742 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 2.7e-25 120.6 83 72.3
SHI02845 Sapria himalayana HOM05D007038 ORTHO05D008893 2.7e-25 120.6 135 53.3
CDE02G0638 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 1.7e-19 101.3 144 42.4
CDE05G1617 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 3.8e-19 100.1 150 40.7
PSO782G2459 Papaver somniferum HOM05D007038 ORTHO05D008893 1.5e-18 98.2 111 51.4
Pp3c7_6690 Physcomitrium patens HOM05D007038 ORTHO05D008893 3.2e-18 97.1 352 26.7
Ah.14g084570 Amaranthus hybridus HOM05D007038 ORTHO05D008893 2.1e-09 67.8 59 57.6
HPP92_020432 Vanilla planifolia HOM05D000367 ORTHO05D008893 4.0e-08 63.5 137 35.8


User provided reference genes

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