Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G0547 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.7e-59 230.3 105 100.0
FvH4_1g05120 Fragaria vesca HOM05D002813 ORTHO05D003203 1.7e-41 172.6 88 90.9
FAN24G2983 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.1e-32 141.4 90 75.6
FAN27G2375 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.1e-32 141.4 91 72.5
FvH4_2g32630 Fragaria vesca HOM05D002813 ORTHO05D003203 3.5e-31 138.3 90 74.4
FAN15G1989 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.5e-31 137.9 87 74.7
FvH4_2g32610 Fragaria vesca HOM05D002813 ORTHO05D003203 1.7e-30 136.0 86 73.3
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.9e-29 132.5 90 71.1
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 4.2e-29 131.3 90 72.2
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.2e-29 131.3 90 72.2
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.6e-28 128.3 86 73.3
FvH4_2g32511 Fragaria vesca HOM05D002813 ORTHO05D003203 2.3e-27 125.6 89 67.4
FAN24G2117 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.8e-27 123.6 86 68.6
FAN27G1770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.3e-26 121.7 89 66.3
FAN26G1940 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.4e-24 116.3 56 91.1
FvH4_2g32520 Fragaria vesca HOM05D002813 ORTHO05D003203 1.8e-24 115.9 87 64.4
FvH4_2g32530 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-19 100.1 88 55.7
FvH4_2g32600 Fragaria vesca HOM05D002813 ORTHO05D003203 4.0e-19 98.2 89 53.9
FAN19G0454 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.2e-19 97.8 82 63.4
RcHm_v2.0_Chr6g0307031 Rosa chinensis HOM05D002813 ORTHO05D003203 2.2e-14 82.4 95 46.3
FAN27G2509 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.5e-13 79.7 95 44.2
QL12p041353 Quercus lobata HOM05D002813 ORTHO05D003203 1.9e-13 79.3 89 46.1
Prupe.1G448200 Prunus persica HOM05D002813 ORTHO05D003203 4.2e-13 78.2 91 45.1
FvH4_2g34980 Fragaria vesca HOM05D002813 ORTHO05D003203 2.7e-12 75.5 62 56.5
FAN20G2873 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.7e-12 75.5 62 56.5
FAN02G4465 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.6e-12 75.1 87 47.1
FAN20G0435 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.6e-12 75.1 71 53.5
FAN27G1144 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.6e-12 75.1 71 52.1
FAN15G0916 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.7e-12 74.7 71 52.1
FvH4_2g35000 Fragaria vesca HOM05D002813 ORTHO05D003203 6.1e-12 74.3 69 53.6
FvH4_5g12240 Fragaria vesca HOM05D002813 ORTHO05D003203 1.0e-11 73.6 68 57.4
FAN04G3253 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-11 73.6 68 57.4
FAN18G3569 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-11 73.6 68 57.4
FAN18G4233 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-11 73.6 68 57.4
FAN05G5767 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.0e-11 72.0 91 45.1
QL12p041348 Quercus lobata HOM05D002813 ORTHO05D003203 3.0e-11 72.0 86 45.3
FAN13G3008 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.0e-11 71.6 68 54.4
FvH4_7g07300 Fragaria vesca HOM05D002813 ORTHO05D003203 5.2e-11 71.2 66 54.5
FAN08G0212 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.2e-11 71.2 68 54.4
FAN01G2630 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.8e-11 70.9 66 54.5
FvH4_2g32540 Fragaria vesca HOM05D002813 ORTHO05D003203 1.2e-10 70.1 69 55.1
QL12p041358 Quercus lobata HOM05D002813 ORTHO05D003203 1.2e-10 70.1 91 40.7
RcHm_v2.0_Chr3g0468781 Rosa chinensis HOM05D002813 ORTHO05D003203 1.2e-10 70.1 63 58.7
RcHm_v2.0_Chr2g0157391 Rosa chinensis HOM05D002813 ORTHO05D003203 1.5e-10 69.7 65 53.8
Eucgr.C02935 Eucalyptus grandis HOM05D002813 ORTHO05D003203 2.0e-10 69.3 89 39.3
Dinv27902 Davidia involucrata HOM05D002813 ORTHO05D003203 2.6e-10 68.9 92 38.0
RcHm_v2.0_Chr6g0307021 Rosa chinensis HOM05D002813 ORTHO05D003203 2.6e-10 68.9 88 44.3
RcHm_v2.0_Chr7g0185371 Rosa chinensis HOM05D002813 ORTHO05D003203 2.6e-10 68.9 86 44.2
Ciclev10010367m.g Citrus clementina HOM05D002813 ORTHO05D003203 3.4e-10 68.6 96 41.7
FvH4_5g12200 Fragaria vesca HOM05D002813 ORTHO05D003203 7.5e-10 67.4 65 53.8
FvH4_5g12211 Fragaria vesca HOM05D002813 ORTHO05D003203 7.5e-10 67.4 63 54.0
FAN18G2398 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.5e-10 67.4 63 54.0
Potri.006G238300 Populus trichocarpa HOM05D002813 ORTHO05D003203 7.5e-10 67.4 95 42.1
RcHm_v2.0_Chr5g0073471 Rosa chinensis HOM05D002813 ORTHO05D003203 7.5e-10 67.4 66 54.5
FvH4_6g41671 Fragaria vesca HOM05D002813 ORTHO05D003203 1.7e-09 66.2 88 43.2
Manes.16G075500 Manihot esculenta HOM05D002813 ORTHO05D003203 2.8e-09 65.5 89 37.1
CiPaw.07G204200 Carya illinoinensis HOM05D002813 ORTHO05D003203 3.7e-09 65.1 89 39.3
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 3.7e-09 65.1 69 49.3
Nitab4.5_0028416g0010 Nicotiana tabacum HOM05D002813 ORTHO05D003203 6.3e-09 64.3 89 39.3
TWI63G1080 Tripterygium wilfordii HOM05D002813 ORTHO05D003203 6.3e-09 64.3 91 40.7
FAN27G2003 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.3e-09 63.9 66 51.5
Nitab4.5_0003794g0040 Nicotiana tabacum HOM05D002813 ORTHO05D003203 8.3e-09 63.9 89 39.3
Actinidia14674 Actinidia chinensis HOM05D002813 ORTHO05D003203 1.4e-08 63.2 63 50.8
CAN.G400.3 Capsicum annuum HOM05D002813 ORTHO05D003203 1.8e-08 62.8 89 39.3
Nn2g11622 Nelumbo nucifera HOM05D002813 ORTHO05D003203 1.8e-08 62.8 69 46.4
FAN05G4830 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.4e-08 62.4 88 39.8
FAN09G4302 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.4e-08 62.4 88 39.8
FAN18G2715 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.4e-08 62.4 65 52.3
MD15G1093400 Malus domestica HOM05D002813 ORTHO05D003203 2.4e-08 62.4 69 46.4
Cc08_g09560 Coffea canephora HOM05D002813 ORTHO05D003203 3.1e-08 62.0 73 42.5
FAN04G3192 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.1e-08 62.0 65 50.8
FvH4_6g11570 Fragaria vesca HOM05D002813 ORTHO05D003203 4.1e-08 61.6 88 38.6
FAN14G2467 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.1e-08 61.6 88 38.6
HanXRQChr12g0371751 Helianthus annuus HOM05D002813 ORTHO05D003203 7.0e-08 60.8 78 35.9
FAN02G4625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 9.2e-08 60.5 89 36.0
PGSC0003DMG400010583 Solanum tuberosum HOM05D002813 ORTHO05D003203 9.2e-08 60.5 89 38.2
Duzib168G2404 Durio zibethinus HOM05D002813 ORTHO05D003203 1.2e-07 60.1 69 43.5
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 1.2e-07 60.1 89 37.1
FAN25G1955 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.6e-07 59.7 64 48.4
RcHm_v2.0_Chr5g0073461 Rosa chinensis HOM05D002813 ORTHO05D003203 1.6e-07 59.7 92 41.3
PGSC0003DMG400002228 Solanum tuberosum HOM05D002813 ORTHO05D003203 1.6e-07 59.7 89 37.1
GSVIVG01035624001 Vitis vinifera HOM05D002813 ORTHO05D003203 1.6e-07 59.7 82 42.7
FvH4_2g34990 Fragaria vesca HOM05D002813 ORTHO05D003203 2.0e-07 59.3 74 40.5
FvH4_7g18342 Fragaria vesca HOM05D002813 ORTHO05D003203 2.0e-07 59.3 68 45.6
FAN06G2895 Fragaria x ananassa HOM05D000201 ORTHO05D007118 2.0e-07 59.3 68 45.6
FAN06G4693 Fragaria x ananassa HOM05D000201 ORTHO05D007118 2.0e-07 59.3 68 45.6
HanXRQChr12g0371771 Helianthus annuus HOM05D002813 ORTHO05D003203 2.0e-07 59.3 78 34.6
FvH4_3g40700 Fragaria vesca HOM05D002813 ORTHO05D003203 2.7e-07 58.9 64 48.4
FAN04G1781 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.7e-07 58.9 65 50.8
FAN11G0908 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.7e-07 58.9 64 48.4
FAN16G0815 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.7e-07 58.9 64 48.4
ATR0705G192 Amborella trichopoda HOM05D002813 ORTHO05D003203 3.5e-07 58.5 69 44.9
MSTRG.9106 Avicennia marina HOM05D002813 ORTHO05D003203 3.5e-07 58.5 70 44.3
FvH4_5g33281 Fragaria vesca HOM05D002813 ORTHO05D003203 4.5e-07 58.2 67 43.3
FAN18G2625 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.5e-07 58.2 61 50.8
FAN21G1994 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.9e-07 57.8 64 46.9
FAN27G3388 Fragaria x ananassa HOM05D002813 ORTHO05D003203 5.9e-07 57.8 63 44.4
FvH4_3g11250 Fragaria vesca HOM05D002813 ORTHO05D003203 7.7e-07 57.4 72 45.8
FvH4_5g12190 Fragaria vesca HOM05D002813 ORTHO05D003203 7.7e-07 57.4 65 50.8
FAN05G0887 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.7e-07 57.4 68 47.1
FAN18G0728 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.7e-07 57.4 65 47.7
FAN18G2017 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.7e-07 57.4 67 43.3
FAN21G0510 Fragaria x ananassa HOM05D002813 ORTHO05D003203 7.7e-07 57.4 76 44.7
FAN18G4231 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.0e-06 57.0 40 62.5
HanXRQChr12g0371741 Helianthus annuus HOM05D002813 ORTHO05D003203 1.3e-06 56.6 77 33.8
FvH4_6g07350 Fragaria vesca HOM05D002813 ORTHO05D003203 1.7e-06 56.2 90 38.9
FAN02G3770 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-06 56.2 66 47.0
FAN15G3400 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-06 56.2 66 40.9
FAN18G1460 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-06 56.2 75 46.7
FAN20G2843 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.7e-06 56.2 65 44.6
HanXRQChr12g0371761 Helianthus annuus HOM05D002813 ORTHO05D003203 1.7e-06 56.2 77 32.5
FvH4_6g15310 Fragaria vesca HOM05D002813 ORTHO05D003203 2.3e-06 55.8 66 45.5
FAN14G4635 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-06 55.8 69 44.9
FAN27G0414 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.3e-06 55.8 74 37.8
TAR626G1934 Trochodendron aralioides HOM05D002813 ORTHO05D003203 2.3e-06 55.8 92 32.6
FAN09G1014 Fragaria x ananassa HOM05D002813 ORTHO05D003203 2.9e-06 55.5 66 45.5
FAN25G0311 Fragaria x ananassa HOM05D000808 ORTHO05D000863 2.9e-06 55.5 72 44.4
FvH4_5g12191 Fragaria vesca HOM05D002813 ORTHO05D003203 3.8e-06 55.1 40 60.0
RcHm_v2.0_Chr6g0306251 Rosa chinensis HOM05D002813 ORTHO05D003203 3.8e-06 55.1 67 44.8
FvH4_3g00150 Fragaria vesca HOM05D002813 ORTHO05D003203 5.0e-06 54.7 74 45.9
FvH4_5g09361 Fragaria vesca HOM05D002813 ORTHO05D003203 5.0e-06 54.7 82 40.2
FAN13G0724 Fragaria x ananassa HOM05D001362 ORTHO05D001310 5.0e-06 54.7 82 40.2
FvH4_5g12160 Fragaria vesca HOM05D002813 ORTHO05D003203 6.6e-06 54.3 55 52.7
FAN02G3428 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.6e-06 54.3 70 47.1
FAN04G2105 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.6e-06 54.3 55 52.7
FAN08G1174 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.6e-06 54.3 55 52.7


User provided reference genes

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