Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G0476 Fragaria x ananassa HOM05D005897 ORTHO05D007128 3.9e-108 394.8 202 100.0
FAN26G0251 Fragaria x ananassa HOM05D005897 ORTHO05D007128 3.0e-100 368.6 196 93.4
FAN23G1701 Fragaria x ananassa HOM05D005897 ORTHO05D007128 3.9e-100 368.2 196 94.4
FAN26G0677 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.1e-97 360.1 197 92.9
FAN19G1802 Fragaria x ananassa HOM05D005897 ORTHO05D007128 5.0e-95 351.3 196 90.8
FvH4_1g09230 Fragaria vesca HOM05D005897 ORTHO05D007128 1.9e-94 349.4 196 90.3
RcHm_v2.0_Chr2g0095761 Rosa chinensis HOM05D005897 ORTHO05D007128 6.6e-79 297.7 196 81.6
Prupe.7G193600 Prunus persica HOM05D005897 ORTHO05D007128 2.0e-35 153.3 210 50.0
MD15G1222300 Malus domestica HOM05D005897 ORTHO05D007128 1.2e-32 144.1 203 47.3
CANSAT56G4244 Cannabis sativa HOM05D005897 ORTHO05D007128 3.3e-30 136.0 203 46.3
Cfa002951 Carpinus fangiana HOM05D005897 ORTHO05D007128 7.3e-30 134.8 194 45.9
Gohir.A06G079100 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.8e-28 130.2 204 44.6
Haze_26054 Corylus avellana HOM05D005897 ORTHO05D007128 1.2e-27 127.5 200 44.0
Sabra06G0107900 Salix brachista HOM05D005897 ORTHO05D007128 1.2e-27 127.5 200 41.0
Sp6g23730 Schrenkiella parvula HOM05D005897 ORTHO05D007128 1.2e-27 127.5 211 40.3
Gohir.D05G036900 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.5e-27 127.1 212 43.4
Duzib150G1683 Durio zibethinus HOM05D005897 ORTHO05D007128 2.0e-27 126.7 209 43.1
Gohir.A05G035400 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.0e-27 126.7 212 42.5
TWI34G1248 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 2.6e-27 126.3 200 44.0
Gohir.D06G078500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 3.4e-27 125.9 206 44.7
Gorai.010G091500 Gossypium raimondii HOM05D005897 ORTHO05D007128 4.5e-27 125.6 206 44.7
Gorai.009G037400 Gossypium raimondii HOM05D005897 ORTHO05D007128 7.6e-27 124.8 212 42.9
QL11p002200 Quercus lobata HOM05D005897 ORTHO05D007128 1.3e-26 124.0 205 41.0
Duzib168G1262 Durio zibethinus HOM05D005897 ORTHO05D007128 2.9e-26 122.9 206 40.8
CiPaw.03G202200 Carya illinoinensis HOM05D005897 ORTHO05D007128 6.4e-26 121.7 195 42.1
TWI32G0373 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 6.4e-26 121.7 195 43.1
C03p11770 Brassica napus HOM05D005897 ORTHO05D007128 1.4e-25 120.6 198 40.4
BolC3t13648H Brassica oleracea HOM05D005897 ORTHO05D007128 1.4e-25 120.6 198 40.4
CiPaw.04G140700 Carya illinoinensis HOM05D005897 ORTHO05D007128 4.2e-25 119.0 204 41.7
MD02G1099300 Malus domestica HOM05D005897 ORTHO05D007128 4.2e-25 119.0 210 41.9
Manes.16G091700 Manihot esculenta HOM05D005897 ORTHO05D007128 4.2e-25 119.0 202 38.6
Thecc.09G071600 Theobroma cacao HOM05D005897 ORTHO05D007128 4.2e-25 119.0 202 40.1
BraA03t10334Z Brassica rapa HOM05D005897 ORTHO05D007128 7.1e-25 118.2 198 39.4
Ciclev10009511m.g Citrus clementina HOM05D005897 ORTHO05D007128 9.3e-25 117.9 203 39.9
A03p10250 Brassica napus HOM05D005897 ORTHO05D007128 1.2e-24 117.5 198 39.4
A10p19270 Brassica napus HOM05D005897 ORTHO05D007128 1.2e-24 117.5 199 39.7
BraA10t44004Z Brassica rapa HOM05D005897 ORTHO05D007128 1.2e-24 117.5 199 39.2
COL.COLO4_21221 Corchorus olitorius HOM05D005897 ORTHO05D007128 2.7e-24 116.3 204 40.7
Dinv42424 Davidia involucrata HOM05D005897 ORTHO05D007128 6.0e-24 115.2 194 39.2
Thhalv10014753m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 1.0e-23 114.4 189 40.7
AT5G20790 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 1.3e-23 114.0 198 39.9
CSS0017580 Camellia sinensis var. sinensis HOM05D005897 ORTHO05D007128 2.3e-23 113.2 201 38.3
PGR044G2287 Punica granatum HOM05D005897 ORTHO05D007128 3.0e-23 112.8 212 40.6
VMungo1309G2633 Vigna mungo HOM05D005897 ORTHO05D007128 5.1e-23 112.1 194 40.2
A02p06480 Brassica napus HOM05D005897 ORTHO05D007128 8.7e-23 111.3 193 38.9
BraA02t05593Z Brassica rapa HOM05D005897 ORTHO05D007128 8.7e-23 111.3 193 38.9
Oeu055332.1 Olea europaea HOM05D005897 ORTHO05D007128 1.1e-22 110.9 195 39.0
Carub.0006s1909 Capsella rubella HOM05D005897 ORTHO05D007128 1.5e-22 110.5 206 39.3
Nitab4.5_0008755g0010 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.5e-22 110.5 196 37.8
BcaB08g36527 Brassica carinata HOM05D005897 ORTHO05D007128 2.5e-22 109.8 202 38.6
Gorai.001G017300 Gossypium raimondii HOM05D005897 ORTHO05D007128 2.5e-22 109.8 201 39.3
BcaC03g13798 Brassica carinata HOM05D005897 ORTHO05D007128 4.3e-22 109.0 196 38.8
BcaC04g19466 Brassica carinata HOM05D005897 ORTHO05D007128 4.3e-22 109.0 198 38.4
BolC2t07071H Brassica oleracea HOM05D005897 ORTHO05D007128 4.3e-22 109.0 196 38.8
Manes.03G043500 Manihot esculenta HOM05D005897 ORTHO05D007128 4.3e-22 109.0 203 37.9
C09p55420 Brassica napus HOM05D005897 ORTHO05D007128 5.6e-22 108.6 202 39.6
BolC9t58404H Brassica oleracea HOM05D005897 ORTHO05D007128 5.6e-22 108.6 202 39.6
Atru.chr7.1754 Acer truncatum HOM05D005897 ORTHO05D007128 7.4e-22 108.2 202 40.6
Lj6g0011186 Lotus japonicus HOM05D005897 ORTHO05D007128 9.6e-22 107.8 196 40.3
SalBow6G0024 Salvia bowleyana HOM05D005897 ORTHO05D007128 2.1e-21 106.7 199 39.7
AT3G43110 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 2.8e-21 106.3 194 40.2
BcaB05g22814 Brassica carinata HOM05D005897 ORTHO05D007128 2.8e-21 106.3 192 35.9
Gohir.A07G016700 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.8e-21 106.3 197 37.6
Gohir.D07G016500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.8e-21 106.3 195 39.0
BcaB01g04771 Brassica carinata HOM05D005897 ORTHO05D007128 4.8e-21 105.5 200 39.5
Sp5g18750 Schrenkiella parvula HOM05D005897 ORTHO05D007128 4.8e-21 105.5 196 40.8
Oeu010835.1 Olea europaea HOM05D005897 ORTHO05D007128 6.2e-21 105.1 193 43.0
Nitab4.5_0001699g0070 Nicotiana tabacum HOM05D005897 ORTHO05D007128 4.0e-20 102.4 196 38.8
Ciclev10024151m.g Citrus clementina HOM05D005897 ORTHO05D007128 5.3e-20 102.1 189 38.1
Aa31LG4G13050 Aethionema arabicum HOM05D005897 ORTHO05D007128 6.9e-20 101.7 193 39.4
AL6G32310 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 6.9e-20 101.7 216 36.6
AL5G21230 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 9.0e-20 101.3 194 37.6
Rhsim05G0003600 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.2e-19 100.9 186 38.2
CARHR152530 Cardamine hirsuta HOM05D005897 ORTHO05D007128 2.0e-19 100.1 200 37.5
Oeu055333.1 Olea europaea HOM05D005897 ORTHO05D007128 2.6e-19 99.8 197 39.6
Phvul.009G224300 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 4.5e-19 99.0 195 39.0
Glyma.15G181800 Glycine max HOM05D005897 ORTHO05D007128 7.6e-19 98.2 193 38.9
Nitab4.5_0000400g0090 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.0e-18 97.8 222 36.5
THA.LOC104811289 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 1.3e-18 97.4 198 41.9
TPR.G4016 Trifolium pratense HOM05D005897 ORTHO05D007128 1.3e-18 97.4 197 37.1
Cpa.g.sc1772.1 Carica papaya HOM05D005897 ORTHO05D007128 1.7e-18 97.1 195 36.4
Peaxi162Scf00191g00103 Petunia axillaris HOM05D005897 ORTHO05D007128 1.7e-18 97.1 207 36.7
Carub.0005s0898 Capsella rubella HOM05D005897 ORTHO05D007128 6.5e-18 95.1 197 36.0
Migut.J00894 Erythranthe guttata HOM05D005897 ORTHO05D007128 6.5e-18 95.1 198 36.4
Psat1g137480 Pisum sativum HOM05D005897 ORTHO05D007128 6.5e-18 95.1 198 36.4
TAR624G1366 Trochodendron aralioides HOM05D005897 ORTHO05D007128 6.5e-18 95.1 198 38.9
Thhalv10002680m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 1.1e-17 94.4 202 37.6
Nn6g35653 Nelumbo nucifera HOM05D005897 ORTHO05D007128 1.1e-17 94.4 214 34.1
THA.LOC104799609 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 1.1e-17 94.4 213 35.7
Lj4g0017959 Lotus japonicus HOM05D005897 ORTHO05D007128 1.4e-17 94.0 188 37.8
CARHR192060 Cardamine hirsuta HOM05D005897 ORTHO05D007128 3.2e-17 92.8 202 36.1
SGA_v2.0_scaffold21G09544 Striga asiatica HOM05D005897 ORTHO05D007128 4.2e-17 92.4 190 37.4
Ca_05224_v3 Cicer arietinum L. HOM05D005897 ORTHO05D007128 5.5e-17 92.0 208 33.7
Medtr2g043710 Medicago truncatula HOM05D005897 ORTHO05D007128 5.5e-17 92.0 205 34.6
Nitab4.5_0001092g0030 Nicotiana tabacum HOM05D005897 ORTHO05D007128 2.1e-16 90.1 218 35.8
Potri.006G137700 Populus trichocarpa HOM05D005897 ORTHO05D007128 2.1e-16 90.1 193 36.3
TAR383G0419 Trochodendron aralioides HOM05D005897 ORTHO05D007128 2.1e-16 90.1 195 35.4
Actinidia39626 Actinidia chinensis HOM05D005897 ORTHO05D007128 4.6e-16 89.0 201 34.8
Medtr4g124850 Medicago truncatula HOM05D005897 ORTHO05D007128 6.0e-16 88.6 203 40.4
Glyma.13G113000 Glycine max HOM05D005897 ORTHO05D007128 1.3e-15 87.4 200 35.0
Rhsim03G0226100 Rhododendron simsii HOM05D005897 ORTHO05D007128 1.3e-15 87.4 198 34.3
Psat4g067280 Pisum sativum HOM05D005897 ORTHO05D007128 2.3e-15 86.7 203 36.9
VMungo1215G2819 Vigna mungo HOM05D005897 ORTHO05D007128 2.3e-15 86.7 191 37.7
Glyma.09G073050 Glycine max HOM05D005897 ORTHO05D007128 3.9e-15 85.9 205 35.1
Eucgr.C03289 Eucalyptus grandis HOM05D005897 ORTHO05D007128 5.1e-15 85.5 195 39.5
MSTRG.19434 Avicennia marina HOM05D005897 ORTHO05D007128 1.9e-14 83.6 195 35.9
Lsat_1_v5_gn_5_139320 Lactuca sativa HOM05D005897 ORTHO05D007128 7.4e-14 81.6 208 33.7
Phvul.003G128400 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 7.4e-14 81.6 212 35.4
unitig_22.g5071 Utricularia gibba HOM05D005897 ORTHO05D007128 9.6e-14 81.3 209 33.0
Nn8g38553 Nelumbo nucifera HOM05D005897 ORTHO05D007128 2.8e-13 79.7 209 32.1
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 2.8e-13 79.7 200 35.5
arahy.Tifrunner.gnm1.ann1.K6A74J Arachis hypogaea HOM05D005897 ORTHO05D007128 3.7e-13 79.3 187 36.4
PGR142G3671 Punica granatum HOM05D005897 ORTHO05D007128 1.8e-12 77.0 202 31.7
Glyma.17G046700 Glycine max HOM05D005897 ORTHO05D007128 2.2e-10 70.1 195 32.3
Migut.L01590 Erythranthe guttata HOM05D005897 ORTHO05D007128 2.9e-10 69.7 199 29.1
AUR62028279 Chenopodium quinoa HOM05D005897 ORTHO05D007128 3.8e-10 69.3 199 34.2
TPR.G11456 Trifolium pratense HOM05D005897 ORTHO05D007128 6.5e-10 68.6 201 34.8
Actinidia29946 Actinidia chinensis HOM05D005897 ORTHO05D007128 7.1e-09 65.1 196 31.1
Lalb_Chr23g0276271 Lupinus albus HOM05D005897 ORTHO05D007128 2.1e-08 63.5 196 32.7
Actinidia38489 Actinidia chinensis HOM05D005897 ORTHO05D007128 4.6e-08 62.4 122 38.5
Lalb_Chr11g0074041 Lupinus albus HOM05D005897 ORTHO05D007128 7.9e-08 61.6 191 31.9
PGSC0003DMG400013552 Solanum tuberosum HOM05D005897 ORTHO05D007128 2.3e-07 60.1 196 31.6
vmacro15871 Vaccinium macrocarpon HOM05D000200 ORTHO05D000262 1.5e-06 57.4 41 61.0


User provided reference genes

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