Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 2.0e-138 495.7 242 100.0
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 3.8e-134 481.5 252 94.8
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 3.8e-134 481.5 252 94.8
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.6e-132 476.1 252 93.3
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.4e-131 473.0 250 92.8
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 2.2e-129 465.7 251 90.8
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 3.4e-114 415.2 256 83.2
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 1.3e-113 413.3 254 81.9
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.4e-96 356.7 251 69.7
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 3.2e-96 355.5 251 70.1
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 3.2e-96 355.5 255 69.0
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 4.1e-96 355.1 250 71.6
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 1.6e-95 353.2 215 78.1
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 2.7e-95 352.4 221 73.8
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 3.5e-95 352.1 251 69.7
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 7.8e-95 350.9 250 69.2
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 3.0e-94 349.0 255 67.1
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 3.9e-94 348.6 245 69.8
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 5.1e-94 348.2 246 70.7
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 8.6e-94 347.4 255 68.2
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 2.8e-92 342.4 227 71.8
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 2.8e-92 342.4 221 72.9
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 2.4e-91 339.3 241 69.3
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 5.2e-91 338.2 245 66.1
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 5.8e-90 334.7 256 65.6
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 9.9e-90 334.0 221 74.2
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 3.8e-89 332.0 243 69.5
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 3.8e-89 332.0 242 69.0
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 1.9e-88 329.7 239 66.9
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 4.2e-88 328.6 218 72.5
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 5.4e-88 328.2 238 66.8
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 9.3e-88 327.4 245 65.7
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 1.6e-87 326.6 226 71.2
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 2.7e-87 325.9 205 74.6
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 4.6e-87 325.1 250 64.4
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 4.6e-87 325.1 250 64.4
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 1.3e-86 323.6 229 70.3
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 1.3e-86 323.6 248 64.5
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 5.1e-86 321.6 239 66.5
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 5.1e-86 321.6 239 66.5
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 5.1e-86 321.6 246 64.2
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 1.1e-85 320.5 221 69.2
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 1.9e-85 319.7 243 65.0
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 3.3e-85 318.9 231 68.4
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 4.3e-85 318.5 246 64.6
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 4.3e-85 318.5 248 64.9
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 4.3e-85 318.5 238 68.9
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 5.6e-85 318.2 218 72.0
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 7.3e-85 317.8 246 64.6
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 9.6e-85 317.4 246 65.4
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 1.6e-84 316.6 227 69.2
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.1e-84 316.2 244 64.8
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 6.2e-84 314.7 250 63.2
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 8.1e-84 314.3 247 65.6
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 8.1e-84 314.3 254 63.8
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 1.1e-83 313.9 209 70.3
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 1.4e-83 313.5 203 73.9
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 1.8e-83 313.2 242 64.5
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 2.4e-83 312.8 231 68.8
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 2.4e-83 312.8 245 63.7
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 4.0e-83 312.0 217 69.1
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 5.3e-83 311.6 244 64.3
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 1.2e-82 310.5 231 67.1
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 1.5e-82 310.1 205 72.2
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 2.6e-82 309.3 200 74.0
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 3.4e-82 308.9 232 68.1
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 5.8e-82 308.1 195 74.4
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 1.3e-81 307.0 244 64.3
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 2.2e-81 306.2 288 55.9
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 6.4e-81 304.7 221 68.8
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 1.1e-80 303.9 223 65.9
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 1.4e-80 303.5 202 71.3
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 2.4e-80 302.8 200 72.5
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 2.4e-80 302.8 200 73.0
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 5.4e-80 301.6 240 62.9
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 4.6e-79 298.5 221 67.9
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 4.6e-79 298.5 240 62.5
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 6.0e-79 298.1 184 75.0
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 1.3e-78 297.0 247 63.6
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 1.5e-77 293.5 197 72.1
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 8.1e-76 287.7 221 65.2
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 2.4e-75 286.2 203 68.5
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 4.0e-75 285.4 183 72.1
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 4.5e-74 282.0 247 58.3
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 2.9e-73 279.3 242 61.6
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 2.9e-73 279.3 182 72.5
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 4.9e-73 278.5 254 57.1
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 8.4e-73 277.7 198 66.7
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 2.4e-72 276.2 175 76.0
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 5.4e-72 275.0 241 61.4
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 3.5e-71 272.3 202 65.8
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 7.9e-71 271.2 178 74.2
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 6.7e-70 268.1 169 75.1
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 2.8e-68 262.7 245 57.1
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 3.7e-68 262.3 171 70.8
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 3.2e-64 249.2 168 70.8
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 1.8e-59 233.4 241 54.8
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 3.1e-59 232.6 238 52.5
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 5.7e-53 211.8 182 59.9
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 8.2e-52 208.0 139 72.7
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 1.4e-51 207.2 233 51.9
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 1.7e-49 200.3 175 52.6
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 1.4e-48 197.2 201 48.8
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 2.7e-47 193.0 246 49.6
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 3.6e-47 192.6 198 48.5
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 2.7e-31 139.8 175 47.4
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 1.5e-29 134.0 208 41.3
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 2.5e-24 116.7 65 76.9
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 7.2e-24 115.2 75 73.3
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 2.7e-23 113.2 160 41.2
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 5.2e-22 109.0 61 75.4
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 5.0e-17 92.4 74 59.5
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 3.5e-10 69.7 62 48.4


User provided reference genes

Program Settings