Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G0268 Fragaria x ananassa HOM05D001461 ORTHO05D005534 4.5e-55 217.6 105 100.0
FvH4_5g27350 Fragaria vesca HOM05D001461 ORTHO05D005534 5.7e-50 200.7 105 90.5
FAN18G4081 Fragaria x ananassa HOM05D001461 ORTHO05D005534 8.5e-46 186.8 98 89.8
RcHm_v2.0_Chr6g0304921 Rosa chinensis HOM05D001461 ORTHO05D005534 3.2e-45 184.9 97 89.7
Prupe.1G460500 Prunus persica HOM05D001461 ORTHO05D005534 4.6e-44 181.0 100 83.0
FAN04G2189 Fragaria x ananassa HOM05D001461 ORTHO05D002801 7.9e-44 180.3 103 81.6
FAN08G0967 Fragaria x ananassa HOM05D001461 ORTHO05D005534 7.9e-44 180.3 103 81.6
MD15G1108200 Malus domestica HOM05D001461 ORTHO05D005534 1.4e-43 179.5 97 84.5
TWI18G0300 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 1.4e-43 179.5 97 84.5
Atru.chr9.2071 Acer truncatum HOM05D001461 ORTHO05D005534 1.8e-43 179.1 97 85.6
Potri.003G135100 Populus trichocarpa HOM05D001461 ORTHO05D005534 1.8e-43 179.1 97 87.6
RcHm_v2.0_Chr7g0195901 Rosa chinensis HOM05D001461 ORTHO05D005534 1.8e-43 179.1 103 80.6
FAN13G1856 Fragaria x ananassa HOM05D001461 ORTHO05D005534 2.3e-43 178.7 103 80.6
TWI60G0303 Tripterygium wilfordii HOM05D001461 ORTHO05D005534 3.0e-43 178.3 97 83.5
FvH4_5g03750 Fragaria vesca HOM05D001461 ORTHO05D005534 3.9e-43 177.9 103 80.6
Nn7g37350 Nelumbo nucifera HOM05D001461 ORTHO05D005534 1.5e-42 176.0 98 82.7
Prupe.5G111900 Prunus persica HOM05D001461 ORTHO05D005534 2.0e-42 175.6 99 84.8
CANSAT21G0685 Cannabis sativa HOM05D001461 ORTHO05D005534 2.5e-42 175.3 97 84.5
CiPaw.12G086700 Carya illinoinensis HOM05D001461 ORTHO05D005534 2.5e-42 175.3 96 84.4
FAN13G2166 Fragaria x ananassa HOM05D001461 ORTHO05D005534 2.5e-42 175.3 103 79.6
GSVIVG01019462001 Vitis vinifera HOM05D001461 ORTHO05D002801 2.5e-42 175.3 97 83.5
Manes.02G014100 Manihot esculenta HOM05D001461 ORTHO05D005534 4.3e-42 174.5 103 77.7
COL.COLO4_21750 Corchorus olitorius HOM05D001461 ORTHO05D005534 5.7e-42 174.1 97 82.5
Lalb_Chr09g0332711 Lupinus albus HOM05D001461 ORTHO05D005534 5.7e-42 174.1 97 83.5
PGR042G3251 Punica granatum HOM05D001461 ORTHO05D005534 1.7e-41 172.6 97 77.3
AT5G41650 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 2.2e-41 172.2 97 81.4
Glyma.01G223800 Glycine max HOM05D001461 ORTHO05D005534 2.8e-41 171.8 97 81.4
MBI07_g06330_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 3.7e-41 171.4 104 76.9
Medtr5g009740 Medicago truncatula HOM05D001461 ORTHO05D005534 3.7e-41 171.4 97 82.5
Actinidia10093 Actinidia chinensis HOM05D001461 ORTHO05D005534 8.2e-41 170.2 97 78.4
MELO3C008160.2 Cucumis melo HOM05D001461 ORTHO05D005534 8.2e-41 170.2 97 83.5
CsaV3_2G033880 Cucumis sativus L. HOM05D001461 ORTHO05D005534 8.2e-41 170.2 97 83.5
ClCG11G007680 Citrullus lanatus HOM05D001461 ORTHO05D005534 1.4e-40 169.5 98 84.7
Dinv32542 Davidia involucrata HOM05D001461 ORTHO05D005534 1.4e-40 169.5 97 80.4
Hma1.2p1_0384F.1_g140900 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 1.4e-40 169.5 97 81.4
MBI15_g19879_MAGBIO Magnolia biondii HOM05D001461 ORTHO05D005534 1.8e-40 169.1 104 76.0
Eucgr.E00823 Eucalyptus grandis HOM05D001461 ORTHO05D005534 2.4e-40 168.7 103 73.8
Thecc.03G290500 Theobroma cacao HOM05D001461 ORTHO05D005534 3.1e-40 168.3 97 80.4
Peaxi162Scf00029g02519 Petunia axillaris HOM05D001461 ORTHO05D005534 4.1e-40 167.9 97 78.4
arahy.Tifrunner.gnm1.ann1.Z0SXD6 Arachis hypogaea HOM05D001461 ORTHO05D005534 5.3e-40 167.5 103 76.7
Duzib084G0256 Durio zibethinus HOM05D001461 ORTHO05D005534 5.3e-40 167.5 97 79.4
HanXRQChr04g0120651 Helianthus annuus HOM05D001461 ORTHO05D005534 5.3e-40 167.5 97 77.3
Psat2g033040 Pisum sativum HOM05D001461 ORTHO05D005534 5.3e-40 167.5 97 81.4
Nitab4.5_0000492g0140 Nicotiana tabacum HOM05D001461 ORTHO05D005534 6.9e-40 167.2 101 76.2
Solyc11g062280.2 Solanum lycopersicum HOM05D001461 ORTHO05D005534 6.9e-40 167.2 97 80.4
Sopen11g024260 Solanum pennellii HOM05D001461 ORTHO05D005534 6.9e-40 167.2 97 80.4
PGSC0003DMG401032495 Solanum tuberosum HOM05D001461 ORTHO05D005534 6.9e-40 167.2 97 80.4
CSS0015159 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 9.1e-40 166.8 97 78.4
CSS0025412 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 9.1e-40 166.8 97 78.4
Aqoxy6G01756 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 1.2e-39 166.4 103 72.8
Aqoxy6G01758 Aquilegia oxysepala HOM05D001461 ORTHO05D005534 1.2e-39 166.4 103 72.8
Gohir.A12G232000 Gossypium hirsutum HOM05D001461 ORTHO05D005534 1.2e-39 166.4 97 79.4
Gohir.D12G235300 Gossypium hirsutum HOM05D001461 ORTHO05D005534 1.2e-39 166.4 97 79.4
Gorai.008G251500 Gossypium raimondii HOM05D001461 ORTHO05D005534 1.2e-39 166.4 97 79.4
Nitab4.5_0002026g0080 Nicotiana tabacum HOM05D001461 ORTHO05D005534 1.5e-39 166.0 97 78.4
MSTRG.20880 Avicennia marina HOM05D001461 ORTHO05D005534 2.0e-39 165.6 97 77.3
Carub.0002s0062 Capsella rubella HOM05D001461 ORTHO05D005534 2.0e-39 165.6 104 75.0
DCAR_025235 Daucus carota HOM05D001461 ORTHO05D005534 2.0e-39 165.6 100 75.0
LjContig00312_ERROPOS870357g0027559 Lotus japonicus HOM05D001461 ORTHO05D005534 2.0e-39 165.6 97 78.4
Sed0013897 Sechium edule HOM05D001461 ORTHO05D005534 2.0e-39 165.6 97 80.4
Migut.E01260 Erythranthe guttata HOM05D001461 ORTHO05D005534 2.6e-39 165.2 100 73.0
PGSC0003DMG400007048 Solanum tuberosum HOM05D001461 ORTHO05D005534 2.6e-39 165.2 97 78.4
Hma1.2p1_0397F.1_g143760 Hydrangea macrophylla HOM05D001461 ORTHO05D005534 3.4e-39 164.9 97 79.4
arahy.Tifrunner.gnm1.ann1.PFJ4ZJ Arachis hypogaea HOM05D001461 ORTHO05D005534 4.5e-39 164.5 103 75.7
Lsat_1_v5_gn_7_2481 Lactuca sativa HOM05D001461 ORTHO05D005534 4.5e-39 164.5 97 77.3
Sabra03G0097400 Salix brachista HOM05D001461 ORTHO05D005534 4.5e-39 164.5 107 74.8
CARHR212880 Cardamine hirsuta HOM05D001461 ORTHO05D005534 5.9e-39 164.1 97 78.4
Thhalv10027655m.g Eutrema salsugineum HOM05D001461 ORTHO05D002801 5.9e-39 164.1 97 79.4
SGA_v2.0_scaffold4G02266 Striga asiatica HOM05D001461 ORTHO05D005534 7.7e-39 163.7 97 78.4
CAN.G375.83 Capsicum annuum HOM05D001461 ORTHO05D005534 1.0e-38 163.3 97 78.4
CARHR046740 Cardamine hirsuta HOM05D001461 ORTHO05D005534 1.3e-38 162.9 104 74.0
Thecc.02G012600 Theobroma cacao HOM05D001461 ORTHO05D005534 1.3e-38 162.9 97 77.3
TPR.G6688 Trifolium pratense HOM05D001461 ORTHO05D005534 1.7e-38 162.5 97 77.3
CSS0041928 Camellia sinensis var. sinensis HOM05D001461 ORTHO05D005534 2.2e-38 162.2 97 75.3
Glyma.11G019700 Glycine max HOM05D001461 ORTHO05D005534 2.9e-38 161.8 98 77.6
SGA_v2.0_scaffold95G28797 Striga asiatica HOM05D001461 ORTHO05D005534 2.9e-38 161.8 99 75.8
BcaB07g31442 Brassica carinata HOM05D001461 ORTHO05D005534 3.8e-38 161.4 104 73.1
BcaB07g31521 Brassica carinata HOM05D001461 ORTHO05D005534 3.8e-38 161.4 104 73.1
A09p14930 Brassica napus HOM05D001461 ORTHO05D005534 3.8e-38 161.4 104 73.1
BraA09t37138Z Brassica rapa HOM05D001461 ORTHO05D005534 3.8e-38 161.4 104 73.1
ECA233G4373 Erigeron canadensis HOM05D001461 ORTHO05D005534 3.8e-38 161.4 100 75.0
LjContig00001g0001336 Lotus japonicus HOM05D001461 ORTHO05D005534 3.8e-38 161.4 99 77.8
LjContig00001g0023327 Lotus japonicus HOM05D001461 ORTHO05D005534 3.8e-38 161.4 99 77.8
AT1G64185 Arabidopsis thaliana HOM05D001461 ORTHO05D005534 5.0e-38 161.0 104 73.1
ECA236G4284 Erigeron canadensis HOM05D001461 ORTHO05D005534 5.0e-38 161.0 97 75.3
Migut.B01819 Erythranthe guttata HOM05D001461 ORTHO05D005534 5.0e-38 161.0 100 71.0
BcaC04g22537 Brassica carinata HOM05D001461 ORTHO05D005534 6.5e-38 160.6 104 73.1
C09p18050 Brassica napus HOM05D001461 ORTHO05D005534 6.5e-38 160.6 104 73.1
BolC9t54702H Brassica oleracea HOM05D001461 ORTHO05D005534 6.5e-38 160.6 104 73.1
Thhalv10023764m.g Eutrema salsugineum HOM05D001461 ORTHO05D005534 6.5e-38 160.6 104 73.1
Aa31LG2G1220 Aethionema arabicum HOM05D001461 ORTHO05D002801 8.5e-38 160.2 101 74.3
AL2G10830 Arabidopsis lyrata HOM05D001461 ORTHO05D005534 1.1e-37 159.8 104 72.1
A09p14170 Brassica napus HOM05D001461 ORTHO05D005534 1.1e-37 159.8 104 72.1
BraA09t37065Z Brassica rapa HOM05D001461 ORTHO05D005534 1.1e-37 159.8 104 72.1
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 1.9e-37 159.1 98 76.5
C09p17080 Brassica napus HOM05D001461 ORTHO05D005534 3.2e-37 158.3 104 71.2
BolC9t54606H Brassica oleracea HOM05D001461 ORTHO05D005534 3.2e-37 158.3 104 71.2
Phvul.002G161800 Phaseolus vulgaris HOM05D001461 ORTHO05D005534 3.2e-37 158.3 98 77.6
VMungo1215G2099 Vigna mungo HOM05D001461 ORTHO05D005534 4.2e-37 157.9 98 77.6
Nitab4.5_0004629g0090 Nicotiana tabacum HOM05D001461 ORTHO05D005534 1.6e-36 156.0 123 62.6
unitig_62.g23802 Utricularia gibba HOM05D001461 ORTHO05D005534 1.6e-36 156.0 115 65.2
PSO384G4702 Papaver somniferum HOM05D001461 ORTHO05D005534 2.7e-36 155.2 106 69.8
SalBow3G1410 Salvia bowleyana HOM05D001461 ORTHO05D005534 3.6e-36 154.8 98 73.5
BcaC04g22646 Brassica carinata HOM05D001461 ORTHO05D005534 4.7e-36 154.5 98 73.5
Os06g0158700 Oryza sativa ssp. japonica HOM05D001461 ORTHO05D005534 6.1e-36 154.1 101 70.3
ATR0580G205 Amborella trichopoda HOM05D001461 ORTHO05D005534 7.9e-36 153.7 96 75.0
Zm00001eb376190 Zea mays HOM05D001461 ORTHO05D005534 1.0e-35 153.3 98 72.4
Zm00001eb376220 Zea mays HOM05D001461 ORTHO05D005534 1.0e-35 153.3 98 72.4
Zm00001eb376260 Zea mays HOM05D001461 ORTHO05D005534 1.0e-35 153.3 98 72.4
Zm00001eb376310 Zea mays HOM05D001461 ORTHO05D005534 1.0e-35 153.3 98 72.4
Zm00001eb376350 Zea mays HOM05D001461 ORTHO05D005534 1.0e-35 153.3 98 72.4
Zm00001eb376910 Zea mays HOM05D001461 ORTHO05D005534 1.0e-35 153.3 98 72.4
Zm00001eb376940 Zea mays HOM05D001461 ORTHO05D005534 1.0e-35 153.3 98 72.4
Migut.E01261 Erythranthe guttata HOM05D001461 ORTHO05D005534 1.8e-35 152.5 96 72.9
EL10Ac1g00327 Beta vulgaris HOM05D001461 ORTHO05D005534 3.0e-35 151.8 103 66.0
HPP92_002836 Vanilla planifolia HOM05D001461 ORTHO05D005534 3.0e-35 151.8 96 67.7
Cc03_g08310 Coffea canephora HOM05D001461 ORTHO05D005534 3.9e-35 151.4 105 70.5
SEGI_29517 Sequoiadendron giganteum HOM05D001461 ORTHO05D005534 1.5e-34 149.4 103 65.0
Sc01g0010020 Simmondsia chinensis HOM05D001461 ORTHO05D005534 4.4e-34 147.9 105 63.8
Carub.0007s3383 Capsella rubella HOM05D001461 ORTHO05D005534 1.7e-33 146.0 97 71.1
AUR62004435 Chenopodium quinoa HOM05D001461 ORTHO05D005534 3.7e-33 144.8 103 62.1
AUR62023513 Chenopodium quinoa HOM05D001461 ORTHO05D005534 3.7e-33 144.8 103 62.1
Hund27230 Selenicereus undatus HOM05D001461 ORTHO05D005534 4.8e-33 144.4 100 69.0
MD08G1128900 Malus domestica HOM05D001461 ORTHO05D005534 6.3e-33 144.1 93 73.1
Lsat_1_v5_gn_5_108040 Lactuca sativa HOM05D001461 ORTHO05D005534 1.1e-32 143.3 97 71.1
Rhsim07G0008500 Rhododendron simsii HOM05D001461 ORTHO05D005534 1.1e-32 143.3 147 52.4
Ah.07g196880 Amaranthus hybridus HOM05D001461 ORTHO05D005534 1.8e-32 142.5 98 68.4
Sed0026937 Sechium edule HOM05D001461 ORTHO05D005534 7.0e-32 140.6 98 71.4
Sc01g0003060 Simmondsia chinensis HOM05D001461 ORTHO05D005534 9.1e-32 140.2 103 64.1
Lj4g0014781 Lotus japonicus HOM05D001461 ORTHO05D005534 4.5e-31 137.9 97 70.1
Lj4g0009029 Lotus japonicus HOM05D001461 ORTHO05D005534 1.0e-30 136.7 88 75.0
TPR.G32972 Trifolium pratense HOM05D001461 ORTHO05D005534 1.4e-27 126.3 78 75.6
AagrBONN_evm.TU.Sc2ySwM_344.4522 Anthoceros agrestis HOM05D001461 ORTHO05D005534 5.2e-27 124.4 104 54.8
SMO364G0470 Selaginella moellendorffii HOM05D001461 ORTHO05D005534 1.3e-25 119.8 100 54.0
Pp3c1_2350 Physcomitrium patens HOM05D001461 ORTHO05D005534 4.8e-25 117.9 104 50.0
MD08G1130100 Malus domestica HOM05D001461 ORTHO05D005534 1.3e-22 109.8 156 42.3
Mapoly0143s0026 Marchantia polymorpha HOM05D001461 ORTHO05D005534 2.5e-21 105.5 105 48.6
QL02p032078 Quercus lobata HOM05D001461 ORTHO05D005534 2.3e-19 99.0 51 88.2
MD14G1117200 Malus domestica HOM05D001461 ORTHO05D005534 3.4e-18 95.1 51 82.4
Cfa012281 Carpinus fangiana HOM05D001461 ORTHO05D005534 5.7e-18 94.4 50 84.0
arahy.Tifrunner.gnm1.ann1.2LVS12 Arachis hypogaea HOM05D001461 ORTHO05D005534 7.5e-18 94.0 52 80.8
Zm00001eb376320 Zea mays HOM05D001461 ORTHO05D005534 8.3e-17 90.5 54 70.4
FAN13G0962 Fragaria x ananassa HOM05D001461 ORTHO05D005534 1.4e-16 89.7 46 89.1
Actinidia28489 Actinidia chinensis HOM05D001461 ORTHO05D005534 4.1e-16 88.2 50 76.0
Oeu054373.3 Olea europaea HOM05D000540 ORTHO05D000681 1.3e-14 83.2 47 78.7
RcHm_v2.0_Chr5g0061641 Rosa chinensis HOM05D001461 ORTHO05D005534 1.3e-14 83.2 42 92.9
vmacro13208 Vaccinium macrocarpon HOM05D001461 ORTHO05D005534 2.2e-14 82.4 44 86.4
arahy.Tifrunner.gnm1.ann1.F4HMTZ Arachis hypogaea HOM05D001461 ORTHO05D005534 1.5e-13 79.7 48 79.2
Glyma.06G264500 Glycine max HOM05D001461 ORTHO05D005534 2.5e-13 79.0 48 75.0
Lj9C594G4 Lonicera japonica HOM05D001461 ORTHO05D005534 3.2e-13 78.6 62 59.7
Oeu063667.1 Olea europaea HOM05D001461 ORTHO05D005534 4.2e-13 78.2 59 64.4
Glyma.05G213500 Glycine max HOM05D001461 ORTHO05D005534 2.1e-12 75.9 53 73.6
arahy.Tifrunner.gnm1.ann1.NAT0LD Arachis hypogaea HOM05D001461 ORTHO05D005534 2.7e-12 75.5 48 75.0
Ciclev10022889m.g Citrus clementina HOM05D001461 ORTHO05D005534 4.7e-12 74.7 46 76.1
Zm00001eb376250 Zea mays HOM05D001461 ORTHO05D005534 4.7e-12 74.7 46 73.9
Glyma.08G020100 Glycine max HOM05D001461 ORTHO05D005534 2.6e-10 68.9 51 68.6
MD08G1129600 Malus domestica HOM05D001461 ORTHO05D005534 2.6e-10 68.9 104 44.2
MCO07G452 Micromonas commoda HOM05D001461 ORTHO05D005534 2.2e-09 65.9 114 36.0
Sopen07g030150 Solanum pennellii HOM05D018748 ORTHO05D009630 8.3e-09 63.9 35 82.9
PRCOL_00003773 Prasinoderma coloniale HOM05D001461 ORTHO05D005534 4.1e-08 61.6 120 32.5
Solyc07g061860.3 Solanum lycopersicum HOM05D001461 ORTHO05D051078 2.9e-06 55.5 29 82.8


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