Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G0166 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.6e-64 249.2 121 100.0
FAN26G0042 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.0e-48 193.7 143 70.6
FAN26G2483 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.0e-48 193.7 143 70.6
FvH4_1g05560 Fragaria vesca HOM05D000151 ORTHO05D000074 4.4e-46 188.0 140 70.0
FvH4_1g05590 Fragaria vesca HOM05D000151 ORTHO05D000074 1.7e-45 186.0 143 67.8
FAN23G0564 Fragaria x ananassa HOM05D000151 ORTHO05D000074 5.9e-43 177.6 139 66.9
FvH4_1g05580 Fragaria vesca HOM05D000151 ORTHO05D000074 7.7e-43 177.2 139 66.9
FAN19G0025 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.9e-42 175.3 139 66.2
FAN19G1756 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.9e-33 146.0 85 85.9
FAN28G2970 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.3e-33 144.8 124 62.9
FAN23G0059 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.0e-31 140.2 102 71.6
FAN26G1236 Fragaria x ananassa HOM05D000151 ORTHO05D000074 5.9e-27 124.4 72 88.9
FAN14G3774 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.9e-13 79.0 134 40.3
FAN09G3033 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.3e-13 77.4 134 40.3
FvH4_6g52260 Fragaria vesca HOM05D000151 ORTHO05D000074 1.1e-12 77.0 134 41.0
FAN19G0371 Fragaria x ananassa HOM05D000151 ORTHO05D000074 7.1e-12 74.3 127 40.2
FAN28G2070 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.2e-12 73.9 127 39.4
FvH4_1g05330 Fragaria vesca HOM05D000151 ORTHO05D000074 3.5e-11 72.0 121 37.2
FvH4_1g05332 Fragaria vesca HOM05D000151 ORTHO05D000074 3.5e-11 72.0 127 39.4
FAN02G4312 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.6e-11 71.6 104 38.5
FAN19G0417 Fragaria x ananassa HOM05D000151 ORTHO05D000074 6.0e-11 71.2 91 47.3
FAN23G0760 Fragaria x ananassa HOM05D000151 ORTHO05D000074 6.0e-11 71.2 121 37.2
Prupe.1G009400 Prunus persica HOM05D000151 ORTHO05D000074 1.0e-10 70.5 89 50.6
FvH4_1g04440 Fragaria vesca HOM05D000151 ORTHO05D000074 1.3e-10 70.1 128 38.3
FAN19G1512 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.3e-10 69.3 121 36.4
FAN26G3184 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.3e-10 69.3 121 36.4
MD13G1047500 Malus domestica HOM05D000151 ORTHO05D000074 2.3e-10 69.3 87 48.3
Dinv28382 Davidia involucrata HOM05D000151 ORTHO05D000074 3.0e-10 68.9 98 42.9
FvH4_1g06763 Fragaria vesca HOM05D000151 ORTHO05D000074 3.0e-10 68.9 91 46.2
RcHm_v2.0_Chr2g0092531 Rosa chinensis HOM05D000151 ORTHO05D000074 3.0e-10 68.9 98 40.8
FAN26G0624 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.9e-10 68.6 121 36.4
Prupe.5G168800 Prunus persica HOM05D000151 ORTHO05D000074 5.1e-10 68.2 88 46.6
Prupe.5G169100 Prunus persica HOM05D000151 ORTHO05D000074 5.1e-10 68.2 88 46.6
Dinv28402 Davidia involucrata HOM05D000151 ORTHO05D000074 6.6e-10 67.8 91 44.0
FvH4_1g07660 Fragaria vesca HOM05D000151 ORTHO05D000074 8.6e-10 67.4 95 46.3
FAN19G1262 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.6e-10 67.4 95 46.3
FAN23G0944 Fragaria x ananassa HOM05D000113 ORTHO05D002571 1.1e-09 67.0 140 36.4
Prupe.1G208900 Prunus persica HOM05D000151 ORTHO05D000074 1.1e-09 67.0 98 42.9
MD13G1075200 Malus domestica HOM05D000151 ORTHO05D000074 1.5e-09 66.6 86 50.0
Cfa018639 Carpinus fangiana HOM05D000151 ORTHO05D000074 2.5e-09 65.9 98 43.9
RcHm_v2.0_Chr4g0417201 Rosa chinensis HOM05D000151 ORTHO05D000074 2.5e-09 65.9 89 49.4
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 3.3e-09 65.5 91 44.0
Dinv28404 Davidia involucrata HOM05D000151 ORTHO05D000074 3.3e-09 65.5 97 40.2
FvH4_4g29691 Fragaria vesca HOM05D000151 ORTHO05D000074 3.3e-09 65.5 90 42.2
FAN23G1834 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.3e-09 65.5 93 45.2
RcHm_v2.0_Chr2g0173801 Rosa chinensis HOM05D000151 ORTHO05D000074 3.3e-09 65.5 137 34.3
Prupe.1G273900 Prunus persica HOM05D000151 ORTHO05D000074 5.6e-09 64.7 94 43.6
FAN03G0848 Fragaria x ananassa HOM05D000151 ORTHO05D000074 7.3e-09 64.3 100 43.0
Dinv28403 Davidia involucrata HOM05D000151 ORTHO05D000074 9.5e-09 63.9 97 40.2
QL01p024159 Quercus lobata HOM05D000151 ORTHO05D000074 9.5e-09 63.9 100 37.0
FAN03G1312 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.2e-08 63.5 100 43.0
FAN10G0230 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.2e-08 63.5 100 43.0
Prupe.1G158300 Prunus persica HOM05D000151 ORTHO05D000074 1.2e-08 63.5 85 48.2
Actinidia20872 Actinidia chinensis HOM05D000151 ORTHO05D000074 1.6e-08 63.2 89 42.7
Prupe.3G068500 Prunus persica HOM05D000151 ORTHO05D000074 1.6e-08 63.2 96 44.8
FvH4_4g29670 Fragaria vesca HOM05D000151 ORTHO05D000074 2.1e-08 62.8 90 41.1
FAN01G1436 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.1e-08 62.8 100 43.0
FAN12G0320 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.1e-08 62.8 90 41.1
FAN26G0107 Fragaria x ananassa HOM05D000113 ORTHO05D002571 2.1e-08 62.8 90 45.6
FAN26G1920 Fragaria x ananassa HOM05D000113 ORTHO05D002571 2.1e-08 62.8 90 45.6
Actinidia25882 Actinidia chinensis HOM05D000151 ORTHO05D000074 2.8e-08 62.4 88 44.3
Dinv28455 Davidia involucrata HOM05D000151 ORTHO05D000074 3.6e-08 62.0 88 44.3
FAN26G2706 Fragaria x ananassa HOM05D003449 ORTHO05D004133 3.6e-08 62.0 56 57.1
FvH4_1g05611 Fragaria vesca HOM05D000151 ORTHO05D046403 4.7e-08 61.6 37 81.1
FvH4_7g29280 Fragaria vesca HOM05D000151 ORTHO05D000074 4.7e-08 61.6 100 42.0
FAN06G3143 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.7e-08 61.6 100 42.0
FAN06G3752 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.7e-08 61.6 100 42.0
Haze_17426 Corylus avellana HOM05D000566 ORTHO05D000686 8.1e-08 60.8 98 40.8
Haze_17429 Corylus avellana HOM05D000151 ORTHO05D000074 8.1e-08 60.8 98 40.8
FvH4_4g30380 Fragaria vesca HOM05D000151 ORTHO05D000074 8.1e-08 60.8 124 37.1
Haze_25246 Corylus avellana HOM05D000151 ORTHO05D000074 1.1e-07 60.5 94 38.3
Prupe.1G076100 Prunus persica HOM05D000151 ORTHO05D000074 1.4e-07 60.1 87 44.8
RcHm_v2.0_Chr1g0355031 Rosa chinensis HOM05D000151 ORTHO05D000074 1.4e-07 60.1 140 30.7
Haze_17430 Corylus avellana HOM05D000151 ORTHO05D000074 1.8e-07 59.7 87 44.8
Hma1.2p1_2038F.1_g312030 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 1.8e-07 59.7 148 33.1
RcHm_v2.0_Chr7g0224141 Rosa chinensis HOM05D000151 ORTHO05D000074 1.8e-07 59.7 111 36.9
FvH4_4g29110 Fragaria vesca HOM05D000151 ORTHO05D000074 2.3e-07 59.3 108 38.9
Gohir.A11G013450 Gossypium hirsutum HOM05D000151 ORTHO05D000074 2.3e-07 59.3 88 42.0
FvH4_1g05900 Fragaria vesca HOM05D000151 ORTHO05D000074 3.1e-07 58.9 135 32.6
Gohir.D11G013633 Gossypium hirsutum HOM05D000151 ORTHO05D000074 3.1e-07 58.9 136 33.1
FvH4_4g30602 Fragaria vesca HOM05D000151 ORTHO05D000074 4.0e-07 58.5 128 31.2
FAN19G2827 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.0e-07 58.5 81 40.7
Prupe.5G168600 Prunus persica HOM05D000151 ORTHO05D000074 4.0e-07 58.5 88 43.2
Prupe.8G049800 Prunus persica HOM05D000151 ORTHO05D000074 4.0e-07 58.5 83 45.8
Gorai.007G014000 Gossypium raimondii HOM05D000151 ORTHO05D000074 5.2e-07 58.2 88 40.9
FAN22G0916 Fragaria x ananassa HOM05D000151 ORTHO05D000074 6.8e-07 57.8 83 42.2
FAN12G3793 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.9e-07 57.4 56 55.4
FAN17G0578 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.9e-07 57.4 108 38.0
FAN22G0205 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.9e-07 57.4 90 42.2
MD10G1043600 Malus domestica HOM05D000151 ORTHO05D000074 8.9e-07 57.4 94 42.6
RcHm_v2.0_Chr1g0324251 Rosa chinensis HOM05D000151 ORTHO05D000074 8.9e-07 57.4 133 30.8
RcHm_v2.0_Chr4g0424551 Rosa chinensis HOM05D000151 ORTHO05D000074 8.9e-07 57.4 86 45.3
RcHm_v2.0_Chr4g0442931 Rosa chinensis HOM05D000151 ORTHO05D000074 8.9e-07 57.4 90 40.0
TWI14G1327 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.2e-06 57.0 82 37.8
FvH4_4g02771 Fragaria vesca HOM05D000151 ORTHO05D000074 1.5e-06 56.6 91 41.8
FAN01G0914 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.5e-06 56.6 115 30.4
FAN26G0631 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.5e-06 56.6 136 33.1
Cfa008697 Carpinus fangiana HOM05D000151 ORTHO05D000074 2.6e-06 55.8 84 40.5
FAN22G1937 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.6e-06 55.8 108 37.0
RcHm_v2.0_Chr7g0223801 Rosa chinensis HOM05D000151 ORTHO05D000074 2.6e-06 55.8 113 34.5
FvH4_4g30610 Fragaria vesca HOM05D000151 ORTHO05D000074 3.4e-06 55.5 84 40.5
FAN12G2490 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.4e-06 55.5 168 26.8
RcHm_v2.0_Chr1g0343741 Rosa chinensis HOM05D000151 ORTHO05D000074 3.4e-06 55.5 87 42.5
RcHm_v2.0_Chr4g0417931 Rosa chinensis HOM05D000151 ORTHO05D000074 3.4e-06 55.5 121 34.7
RcHm_v2.0_Chr6g0258051 Rosa chinensis HOM05D000151 ORTHO05D000074 3.4e-06 55.5 139 28.1
FvH4_4g30110 Fragaria vesca HOM05D000151 ORTHO05D000074 4.4e-06 55.1 165 27.3
FAN12G0243 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.4e-06 55.1 83 41.0
FAN12G2089 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.4e-06 55.1 125 35.2
FAN26G0694 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.4e-06 55.1 103 38.8
Prupe.2G253900 Prunus persica HOM05D000151 ORTHO05D000074 4.4e-06 55.1 147 32.0
TWI23G0161 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 4.4e-06 55.1 82 39.0
Haze_07884 Corylus avellana HOM05D000151 ORTHO05D000074 5.8e-06 54.7 85 42.4
FvH4_7g28840 Fragaria vesca HOM05D000151 ORTHO05D000074 5.8e-06 54.7 143 28.7
FAN07G2226 Fragaria x ananassa HOM05D000151 ORTHO05D000074 5.8e-06 54.7 81 43.2
FAN26G2234 Fragaria x ananassa HOM05D000151 ORTHO05D000074 5.8e-06 54.7 138 31.9
Rhsim11G0176200 Rhododendron simsii HOM05D000151 ORTHO05D000074 7.6e-06 54.3 108 34.3
FAN15G1730 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.9e-06 53.9 110 33.6
FAN15G2038 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.9e-06 53.9 110 32.7


User provided reference genes

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