Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G0122 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.3e-148 529.6 265 100.0
FAN22G1451 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.8e-116 422.9 268 82.8
FAN15G3594 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.7e-109 398.3 249 84.3
FAN10G0025 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.3e-98 363.6 242 79.8
FAN25G0689 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.2e-96 357.1 282 70.2
FAN13G0422 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.3e-95 353.6 281 70.8
FAN20G1447 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.0e-95 351.7 211 85.8
FAN24G2568 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.9e-94 349.7 277 69.7
FAN07G1842 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.6e-93 346.7 281 70.1
FvH4_3g44301 Fragaria vesca HOM05D004516 ORTHO05D005194 3.6e-93 345.5 282 68.8
FAN11G1790 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.7e-93 345.1 277 69.3
FAN03G0371 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.1e-93 344.7 277 69.3
FAN23G0994 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.1e-93 344.7 275 67.6
FAN23G1267 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.1e-93 344.7 281 68.7
FAN15G1785 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.4e-92 343.6 277 69.0
FAN03G3119 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.8e-92 343.2 277 69.0
FAN06G3758 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.2e-92 341.7 277 68.6
FAN09G3758 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.8e-92 341.3 277 68.6
FAN03G2899 Fragaria x ananassa HOM05D004516 ORTHO05D005194 9.8e-91 337.4 281 68.0
FAN12G1193 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.9e-90 335.1 281 67.6
FAN07G0029 Fragaria x ananassa HOM05D004516 ORTHO05D005194 8.6e-87 324.3 277 66.1
FAN05G4935 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.1e-86 323.9 274 65.7
FvH4_6g21610 Fragaria vesca HOM05D004516 ORTHO05D005194 1.8e-84 316.6 183 86.9
FAN22G0239 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.2e-84 315.1 266 65.4
FvH4_5g19180 Fragaria vesca HOM05D004516 ORTHO05D005194 2.1e-77 293.1 257 63.0
FAN03G0909 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.1e-76 290.8 272 62.1
FAN07G0361 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.8e-76 290.0 179 83.2
FAN02G1419 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.4e-75 285.4 268 63.1
FAN10G1093 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.2e-73 279.3 264 63.3
FAN15G0769 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.5e-72 275.8 265 62.3
FAN13G1629 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.6e-69 265.8 149 90.6
FAN13G1456 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.1e-68 264.2 281 56.9
FAN28G0245 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.4e-67 259.2 224 66.5
FAN28G1213 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.4e-67 259.2 224 66.5
FAN10G0238 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.4e-67 258.8 276 57.6
FAN25G1657 Fragaria x ananassa HOM05D004516 ORTHO05D005194 7.5e-67 258.1 199 71.4
FAN14G0839 Fragaria x ananassa HOM05D004516 ORTHO05D045680 9.9e-67 257.7 227 68.7
FAN10G0086 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.3e-66 257.3 183 75.4
FAN10G0672 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.3e-66 257.3 183 75.4
FAN10G4065 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.3e-66 257.3 183 75.4
FAN09G3769 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.2e-64 250.8 183 72.7
FAN09G3014 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.3e-63 246.5 266 56.8
FAN10G1624 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.5e-62 243.8 263 53.2
FvH4_6g34882 Fragaria vesca HOM05D004516 ORTHO05D045680 1.9e-62 243.4 227 66.5
FAN09G1891 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.3e-62 242.7 263 52.9
FAN17G2263 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.6e-61 240.4 263 52.9
FAN20G1866 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.6e-61 239.2 178 76.4
FAN02G2369 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.7e-61 238.8 153 81.7
FAN12G4265 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.4e-60 237.3 263 52.1
FAN17G0177 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.4e-60 237.3 263 52.1
FAN15G2282 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.0e-60 235.7 263 51.7
FAN09G1624 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.2e-60 235.3 263 51.7
FAN22G0748 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.2e-60 235.3 263 51.7
FAN10G1325 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.8e-60 235.0 263 51.7
FAN16G1053 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.4e-59 232.6 271 54.2
FAN16G1822 Fragaria x ananassa HOM05D004516 ORTHO05D005194 9.9e-59 231.1 252 56.0
FAN23G1761 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.3e-58 230.7 136 86.0
FAN09G4587 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.9e-55 219.2 248 51.6
FAN19G1339 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.8e-52 210.3 163 70.6
FAN13G2573 Fragaria x ananassa HOM05D004516 ORTHO05D000278 5.3e-52 208.8 123 87.0
FAN23G1219 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.1e-46 191.0 175 63.4
FAN24G2223 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.9e-46 190.3 247 47.8
FAN05G0424 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.4e-41 174.1 107 82.2
FAN24G3551 Fragaria x ananassa HOM05D004516 ORTHO05D005194 7.1e-41 171.8 271 44.3
FAN07G1174 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.1e-40 170.2 211 48.8
RcHm_v2.0_Chr4g0392971 Rosa chinensis HOM05D004516 ORTHO05D005194 4.6e-40 169.1 232 44.4
FAN21G3102 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.0e-39 166.4 271 44.6
FAN04G1692 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.1e-39 165.6 175 54.9
FAN01G0148 Fragaria x ananassa HOM05D004516 ORTHO05D005194 7.4e-38 161.8 198 52.5
FAN01G1620 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.9e-36 155.2 160 55.6
FAN26G2540 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.5e-34 148.7 170 54.1
FAN07G0346 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.2e-33 146.4 89 83.1
FAN27G2780 Fragaria x ananassa HOM05D004516 ORTHO05D206389 4.2e-33 146.0 89 83.1
FAN16G0564 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.5e-33 145.6 127 61.4
FAN18G4542 Fragaria x ananassa HOM05D004516 ORTHO05D005194 7.1e-33 145.2 240 42.1
FAN10G3675 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.2e-32 144.4 220 48.6
FAN28G0111 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.6e-32 144.1 90 82.2
FAN14G1051 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.3e-30 136.3 143 54.5
FAN23G1492 Fragaria x ananassa HOM05D004516 ORTHO05D005194 8.2e-29 131.7 92 75.0
FAN05G3522 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.4e-28 131.0 103 72.8
FAN04G1458 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.9e-26 123.2 85 78.8
FAN03G2498 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.8e-26 122.9 76 82.9
FAN19G1778 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.2e-25 119.4 179 39.1
FAN16G0694 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.6e-24 115.9 85 74.1
FAN09G1164 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.0e-23 114.8 179 38.0
FAN11G3175 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.0e-23 114.8 184 38.0
FAN03G2654 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.8e-21 106.7 62 80.6
FAN07G2423 Fragaria x ananassa HOM05D004516 ORTHO05D203616 1.4e-20 104.4 69 78.3
FAN27G0566 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.3e-20 102.4 161 41.6
RcHm_v2.0_Chr6g0305091 Rosa chinensis HOM05D004516 ORTHO05D005194 6.9e-20 102.1 262 29.8
FAN02G1001 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.7e-18 97.4 179 34.1
FAN25G3605 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.7e-18 97.4 179 34.1
FAN14G3153 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.4e-17 94.4 183 35.0
FAN01G1218 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.2e-17 92.8 256 28.5
FAN03G2119 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.6e-16 89.7 279 28.0
FAN18G2686 Fragaria x ananassa HOM05D004516 ORTHO05D005194 4.6e-16 89.4 203 33.0
FAN14G3645 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.1e-16 89.0 145 40.7
FAN11G1286 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.0e-15 86.7 249 27.7
FAN11G2926 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.0e-15 86.7 178 33.7
FAN08G1224 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.7e-15 85.5 202 32.7
FAN25G0220 Fragaria x ananassa HOM05D004516 ORTHO05D005194 6.7e-15 85.5 178 34.3
FAN02G2246 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.5e-14 84.3 203 32.0
FAN14G3922 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.0e-14 84.0 178 33.7
FAN14G5934 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.7e-14 82.4 148 36.5
RcHm_v2.0_Chr7g0242211 Rosa chinensis HOM05D004516 ORTHO05D005194 1.7e-13 80.9 64 62.5
FAN25G3465 Fragaria x ananassa HOM05D004516 ORTHO05D005194 2.2e-13 80.5 157 33.1
FAN09G0932 Fragaria x ananassa HOM05D033287 ORTHO05D200818 4.5e-11 72.8 44 81.8
FAN12G3538 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.9e-11 72.4 113 38.9
FAN24G1619 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.2e-09 66.6 152 32.9
FAN06G1918 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.5e-09 65.9 134 35.1
FAN24G3296 Fragaria x ananassa HOM05D004516 ORTHO05D005194 5.5e-09 65.9 113 36.3
FAN17G2411 Fragaria x ananassa HOM05D004516 ORTHO05D005194 7.2e-09 65.5 131 35.1
RcHm_v2.0_Chr5g0059411 Rosa chinensis HOM05D004516 ORTHO05D005194 1.2e-08 64.7 183 29.0
FAN24G2122 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.6e-08 63.2 113 38.1
FAN25G0543 Fragaria x ananassa HOM05D004516 ORTHO05D005194 7.9e-08 62.0 107 37.4
FAN11G3115 Fragaria x ananassa HOM05D004516 ORTHO05D005194 1.4e-07 61.2 105 35.2
FAN16G1746 Fragaria x ananassa HOM05D004516 ORTHO05D005194 3.9e-07 59.7 101 34.7


User provided reference genes

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