Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN28G0070 Fragaria x ananassa HOM05D009792 ORTHO05D009073 1.5e-161 572.8 278 100.0
FAN26G1355 Fragaria x ananassa HOM05D009792 ORTHO05D009073 2.0e-118 429.5 345 66.1
FvH4_1g12771 Fragaria vesca HOM05D000007 ORTHO05D009073 5.1e-90 335.1 373 53.9
FAN19G0099 Fragaria x ananassa HOM05D009792 ORTHO05D009073 3.2e-76 289.3 268 61.9
FAN23G1066 Fragaria x ananassa HOM05D009792 ORTHO05D009073 5.0e-69 265.4 143 88.8
RcHm_v2.0_Chr4g0436521 Rosa chinensis HOM05D009792 ORTHO05D009073 1.1e-49 201.1 251 45.4
FvH4_4g28520 Fragaria vesca HOM05D009792 ORTHO05D009073 1.9e-44 183.7 252 44.0
FAN12G2506 Fragaria x ananassa HOM05D009792 ORTHO05D009073 4.2e-44 182.6 252 43.7
MD11G1124100 Malus domestica HOM05D000007 ORTHO05D009073 8.5e-37 158.3 237 41.4
MD11G1124200 Malus domestica HOM05D000007 ORTHO05D009073 3.2e-36 156.4 238 41.2
MD03G1110700 Malus domestica HOM05D000007 ORTHO05D009073 5.5e-36 155.6 274 38.7
Prupe.6G093100 Prunus persica HOM05D000007 ORTHO05D009073 2.7e-35 153.3 260 39.2
FAN16G0179 Fragaria x ananassa HOM05D000007 ORTHO05D009073 8.0e-35 151.8 263 37.6
FAN01G1574 Fragaria x ananassa HOM05D000007 ORTHO05D009073 2.4e-31 140.2 241 38.6
RcHm_v2.0_Chr2g0138411 Rosa chinensis HOM05D000007 ORTHO05D022672 9.1e-31 138.3 233 41.2
FvH4_7g33810 Fragaria vesca HOM05D000007 ORTHO05D009073 1.2e-30 137.9 244 37.7
Prupe.1G333100 Prunus persica HOM05D000007 ORTHO05D009073 2.0e-30 137.1 260 36.9
FAN17G1885 Fragaria x ananassa HOM05D006060 ORTHO05D007268 2.9e-29 133.3 210 41.0
RcHm_v2.0_Chr4g0399251 Rosa chinensis HOM05D000007 ORTHO05D009073 3.6e-27 126.3 243 34.6
MD11G1124500 Malus domestica HOM05D009792 ORTHO05D009073 4.7e-27 125.9 256 35.5
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 6.1e-27 125.6 218 36.2
FvH4_4g30181 Fragaria vesca HOM05D021789 ORTHO05D025345 8.0e-27 125.2 226 37.6
FAN12G1824 Fragaria x ananassa HOM05D021789 ORTHO05D025345 1.0e-26 124.8 226 37.6
Prupe.1G285300 Prunus persica HOM05D000007 ORTHO05D009073 5.2e-26 122.5 244 35.2
FAN22G1157 Fragaria x ananassa HOM05D009792 ORTHO05D009073 2.2e-24 117.1 227 37.4
MD16G1019000 Malus domestica HOM05D000007 ORTHO05D009073 2.2e-24 117.1 296 31.8
FAN22G1852 Fragaria x ananassa HOM05D021789 ORTHO05D025345 8.3e-24 115.2 224 37.9
MD13G1020600 Malus domestica HOM05D000007 ORTHO05D009073 4.1e-23 112.8 286 29.4
FAN07G2784 Fragaria x ananassa HOM05D021789 ORTHO05D009073 5.4e-23 112.5 193 39.9
FvH4_4g07100 Fragaria vesca HOM05D000007 ORTHO05D009073 9.2e-23 111.7 226 34.5
MD02G1067600 Malus domestica HOM05D009792 ORTHO05D009073 1.2e-22 111.3 188 39.4
Cfa008807 Carpinus fangiana HOM05D009398 ORTHO05D011511 5.9e-22 109.0 220 31.4
Prupe.1G285500 Prunus persica HOM05D000007 ORTHO05D009073 5.9e-22 109.0 278 30.6
Haze_11821 Corylus avellana HOM05D009398 ORTHO05D011511 7.8e-22 108.6 221 30.8
FAN26G0358 Fragaria x ananassa HOM05D000091 ORTHO05D022672 1.7e-21 107.5 242 36.8
Actinidia30171 Actinidia chinensis HOM05D000007 ORTHO05D009073 6.6e-21 105.5 267 30.3
Dinv16557 Davidia involucrata HOM05D000007 ORTHO05D009073 1.6e-19 100.9 220 34.1
FAN22G0536 Fragaria x ananassa HOM05D009792 ORTHO05D009073 2.1e-19 100.5 236 33.1
FvH4_1g24080 Fragaria vesca HOM05D000091 ORTHO05D022672 4.7e-19 99.4 212 36.8
CSS0046872 Camellia sinensis var. sinensis HOM05D000171 ORTHO05D009073 2.3e-18 97.1 229 30.6
CSS0043495 Camellia sinensis var. sinensis HOM05D000171 ORTHO05D000101 3.1e-18 96.7 231 30.3
QL03p066111 Quercus lobata HOM05D009398 ORTHO05D011511 4.0e-18 96.3 251 30.3
QL03p062572 Quercus lobata HOM05D009398 ORTHO05D011511 6.8e-18 95.5 252 28.2
QL03p068339 Quercus lobata HOM05D009398 ORTHO05D011511 8.9e-18 95.1 189 33.9
Prupe.1G300900 Prunus persica HOM05D015152 ORTHO05D009073 2.6e-17 93.6 262 30.2
QL03p062618 Quercus lobata HOM05D009398 ORTHO05D009073 3.4e-17 93.2 261 30.7
QL03p068470 Quercus lobata HOM05D009398 ORTHO05D011511 4.4e-17 92.8 233 30.5
ECA246G2528 Erigeron canadensis HOM05D000007 ORTHO05D009073 2.2e-16 90.5 253 28.1
HanXRQChr07g0189371 Helianthus annuus HOM05D000171 ORTHO05D009073 4.9e-16 89.4 233 29.2
FAN19G3110 Fragaria x ananassa HOM05D009792 ORTHO05D009073 1.4e-15 87.8 58 75.9
Prupe.1G283900 Prunus persica HOM05D003015 ORTHO05D009073 1.4e-15 87.8 129 38.8
CSS0037710 Camellia sinensis var. sinensis HOM05D000171 ORTHO05D009073 2.4e-15 87.0 215 31.2
PGSC0003DMG400047325 Solanum tuberosum HOM05D000171 ORTHO05D000101 4.1e-15 86.3 233 30.5
ECA232G4304 Erigeron canadensis HOM05D000171 ORTHO05D009073 1.2e-14 84.7 205 29.8
Prupe.1G300600 Prunus persica HOM05D000007 ORTHO05D009073 2.0e-14 84.0 233 30.5
Rhsim04G0093700 Rhododendron simsii HOM05D000007 ORTHO05D009073 3.5e-14 83.2 230 33.9
Manes.11G003000 Manihot esculenta HOM05D000171 ORTHO05D000101 6.0e-14 82.4 253 30.0
FvH4_4g30190 Fragaria vesca HOM05D021789 ORTHO05D025345 2.3e-13 80.5 148 39.9
HanXRQChr02g0047481 Helianthus annuus HOM05D000007 ORTHO05D009073 3.9e-13 79.7 232 28.9
Prupe.1G285200 Prunus persica HOM05D015152 ORTHO05D009073 6.6e-13 79.0 265 27.2
COL.COLO4_15974 Corchorus olitorius HOM05D000007 ORTHO05D000521 8.6e-13 78.6 219 28.3
FAN07G0047 Fragaria x ananassa HOM05D009792 ORTHO05D011511 8.6e-13 78.6 111 39.6
HanXRQChr02g0047431 Helianthus annuus HOM05D000171 ORTHO05D009073 8.6e-13 78.6 229 29.3
HanXRQChr02g0047451 Helianthus annuus HOM05D000171 ORTHO05D009073 8.6e-13 78.6 229 29.3
Eucgr.G02384 Eucalyptus grandis HOM05D000171 ORTHO05D000101 2.5e-12 77.0 243 29.6
CSS0045215 Camellia sinensis var. sinensis HOM05D000171 ORTHO05D009073 5.6e-12 75.9 181 30.9
FvH4_4g07091 Fragaria vesca HOM05D024456 ORTHO05D009073 7.3e-12 75.5 175 32.0
FAN07G0854 Fragaria x ananassa HOM05D009792 ORTHO05D035474 7.3e-12 75.5 141 34.0
Rhsim04G0086800 Rhododendron simsii HOM05D000171 ORTHO05D000101 1.2e-11 74.7 188 35.1
RhsimUnG0048800 Rhododendron simsii HOM05D000171 ORTHO05D000101 1.6e-11 74.3 186 34.4
FAN22G1459 Fragaria x ananassa HOM05D009792 ORTHO05D009073 2.1e-11 73.9 130 40.8
FAN07G2742 Fragaria x ananassa HOM05D009792 ORTHO05D009073 2.8e-11 73.6 241 31.1
Rhsim06G0172500 Rhododendron simsii HOM05D000007 ORTHO05D000521 2.8e-11 73.6 270 28.9
PSO017G0199 Papaver somniferum HOM05D000007 ORTHO05D000676 3.6e-11 73.2 202 28.2
PSO339G2185 Papaver somniferum HOM05D000007 ORTHO05D000676 3.6e-11 73.2 242 25.2
PSO339G5214 Papaver somniferum HOM05D000007 ORTHO05D000676 3.6e-11 73.2 239 25.1
FAN19G0184 Fragaria x ananassa HOM05D000091 ORTHO05D022672 4.7e-11 72.8 128 40.6
HanXRQChr16g0511581 Helianthus annuus HOM05D000171 ORTHO05D009073 1.1e-10 71.6 217 28.6
PSO832G2465 Papaver somniferum HOM05D000007 ORTHO05D000676 1.1e-10 71.6 257 21.8
Rhsim08G0210600 Rhododendron simsii HOM05D000171 ORTHO05D000101 1.1e-10 71.6 232 28.9
Cpa.g.sc483.2 Carica papaya HOM05D000007 ORTHO05D000521 1.4e-10 71.2 219 26.0
Dinv01180 Davidia involucrata HOM05D000007 ORTHO05D000521 1.4e-10 71.2 215 29.3
Dinv26435 Davidia involucrata HOM05D000007 ORTHO05D000521 1.4e-10 71.2 215 29.3
MBI05_g07862_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000676 1.4e-10 71.2 189 25.4
MBI14_g33670_MAGBIO Magnolia biondii HOM05D000142 ORTHO05D000124 1.4e-10 71.2 148 30.4
ClCG01G007450 Citrullus lanatus HOM05D000171 ORTHO05D009073 1.8e-10 70.9 243 28.8
DCAR_011586 Daucus carota HOM05D000007 ORTHO05D009073 1.8e-10 70.9 284 24.3
PSO478G0982 Papaver somniferum HOM05D000007 ORTHO05D000676 2.3e-10 70.5 235 28.1
PSO832G3880 Papaver somniferum HOM05D000007 ORTHO05D000676 3.1e-10 70.1 214 28.5
PSO832G4121 Papaver somniferum HOM05D000007 ORTHO05D000676 3.1e-10 70.1 214 28.5
MBI17_g24693_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000521 4.0e-10 69.7 176 27.8
PSO210G2197 Papaver somniferum HOM05D000007 ORTHO05D000676 4.0e-10 69.7 244 27.0
MBI15_g33468_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 5.2e-10 69.3 229 24.5
Prupe.1G147000 Prunus persica HOM05D000007 ORTHO05D000521 5.2e-10 69.3 225 27.1
Aqoxy1G01368 Aquilegia oxysepala HOM05D000007 ORTHO05D004496 6.8e-10 68.9 183 29.5
FAN17G1591 Fragaria x ananassa HOM05D009792 ORTHO05D000676 6.8e-10 68.9 119 37.0
PSO356G0059 Papaver somniferum HOM05D000007 ORTHO05D000676 8.9e-10 68.6 188 28.2
PSO063G7162 Papaver somniferum HOM05D000007 ORTHO05D000676 1.2e-09 68.2 183 28.4
Hma1.2p1_1532F.1_g289320 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 1.5e-09 67.8 259 25.5
MBI14_g41393_MAGBIO Magnolia biondii HOM05D000142 ORTHO05D000124 1.5e-09 67.8 161 28.0
Thecc.05G022700 Theobroma cacao HOM05D008437 ORTHO05D010577 1.5e-09 67.8 169 29.6
PSO063G3692 Papaver somniferum HOM05D000007 ORTHO05D000676 4.4e-09 66.2 131 32.1
Rhsim12G0150000 Rhododendron simsii HOM05D000007 ORTHO05D000676 4.4e-09 66.2 173 32.9
CSS0013400 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 5.8e-09 65.9 255 22.0
PSO832G1958 Papaver somniferum HOM05D000007 ORTHO05D000676 5.8e-09 65.9 153 27.5
CARHR253630 Cardamine hirsuta HOM05D000171 ORTHO05D000101 7.5e-09 65.5 210 29.0
ECA234G3110 Erigeron canadensis HOM05D000007 ORTHO05D009073 7.5e-09 65.5 235 26.8
PSO832G1025 Papaver somniferum HOM05D000007 ORTHO05D000676 7.5e-09 65.5 166 25.9
HanXRQChr02g0048031 Helianthus annuus HOM05D000171 ORTHO05D009073 1.3e-08 64.7 221 24.9
PSO832G1643 Papaver somniferum HOM05D000007 ORTHO05D000676 1.3e-08 64.7 209 24.4
CSS0022094 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 1.7e-08 64.3 314 21.7
CSS0040081 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 1.7e-08 64.3 248 23.8
PSO384G1517 Papaver somniferum HOM05D000007 ORTHO05D000676 1.7e-08 64.3 187 27.8
AL3G17110 Arabidopsis lyrata HOM05D000007 ORTHO05D000017 2.2e-08 63.9 225 26.2
PSO832G3431 Papaver somniferum HOM05D000007 ORTHO05D000676 2.2e-08 63.9 238 26.5
PSO384G0673 Papaver somniferum HOM05D000007 ORTHO05D000676 2.9e-08 63.5 133 30.8
BcaB01g00375 Brassica carinata HOM05D000171 ORTHO05D000101 3.7e-08 63.2 177 27.7
BcaB01g00443 Brassica carinata HOM05D000171 ORTHO05D032310 3.7e-08 63.2 139 27.3
PSO210G2013 Papaver somniferum HOM05D000007 ORTHO05D000676 3.7e-08 63.2 132 32.6
TAR626G0319 Trochodendron aralioides HOM05D000007 ORTHO05D000017 3.7e-08 63.2 227 25.1
Dinv16551 Davidia involucrata HOM05D000171 ORTHO05D000101 4.9e-08 62.8 177 29.9
PSO135G0762 Papaver somniferum HOM05D000007 ORTHO05D000676 4.9e-08 62.8 255 23.5
PSO732G0122 Papaver somniferum HOM05D000007 ORTHO05D000676 4.9e-08 62.8 167 28.7
CiPaw.13G053300 Carya illinoinensis HOM05D000007 ORTHO05D000521 6.4e-08 62.4 127 32.3
PSO063G2674 Papaver somniferum HOM05D000007 ORTHO05D000676 6.4e-08 62.4 247 22.7
PSO724G0980 Papaver somniferum HOM05D000007 ORTHO05D000676 6.4e-08 62.4 185 26.5
PSO384G0615 Papaver somniferum HOM05D000007 ORTHO05D000676 8.3e-08 62.0 169 28.4
Nitab4.5_0000059g0520 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.1e-07 61.6 239 23.0
PSO017G3977 Papaver somniferum HOM05D000007 ORTHO05D000676 1.1e-07 61.6 138 29.7
FAN07G2424 Fragaria x ananassa HOM05D000007 ORTHO05D009073 1.4e-07 61.2 109 34.9
HanXRQChr04g0095931 Helianthus annuus HOM05D000171 ORTHO05D009073 1.4e-07 61.2 219 26.5
PSO063G0699 Papaver somniferum HOM05D000007 ORTHO05D000676 1.4e-07 61.2 243 22.2
PSO421G0110 Papaver somniferum HOM05D000007 ORTHO05D000676 1.4e-07 61.2 117 31.6
PSO421G0233 Papaver somniferum HOM05D000007 ORTHO05D000676 1.4e-07 61.2 119 31.1
PSO421G0361 Papaver somniferum HOM05D000007 ORTHO05D000676 1.4e-07 61.2 117 31.6
PSO421G0624 Papaver somniferum HOM05D000007 ORTHO05D000676 1.4e-07 61.2 117 31.6
MELO3C022333.2 Cucumis melo HOM05D002645 ORTHO05D002741 1.9e-07 60.8 166 25.3
Migut.F01755 Erythranthe guttata HOM05D000007 ORTHO05D000017 1.9e-07 60.8 232 22.8
HanXRQChr05g0146381 Helianthus annuus HOM05D000171 ORTHO05D009073 1.9e-07 60.8 248 26.2
MBI05_g26511_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000676 1.9e-07 60.8 136 30.1
PSO173G0121 Papaver somniferum HOM05D000007 ORTHO05D000676 1.9e-07 60.8 140 29.3
PSO421G0135 Papaver somniferum HOM05D000007 ORTHO05D000676 2.4e-07 60.5 119 31.1
PSO566G0073 Papaver somniferum HOM05D000007 ORTHO05D000676 2.4e-07 60.5 173 26.6
PSO591G0076 Papaver somniferum HOM05D000007 ORTHO05D000676 2.4e-07 60.5 124 34.7
PSO675G3899 Papaver somniferum HOM05D000007 ORTHO05D000676 2.4e-07 60.5 134 31.3
vmacro17342 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 2.4e-07 60.5 230 25.2
vmacro23030 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 2.4e-07 60.5 226 25.2
vmacro23187 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 2.4e-07 60.5 232 25.9
Aqoxy5G04199 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 3.2e-07 60.1 247 23.9
PSO210G6225 Papaver somniferum HOM05D000007 ORTHO05D000676 3.2e-07 60.1 178 26.4
Haze_03009 Corylus avellana HOM05D000007 ORTHO05D000039 4.1e-07 59.7 261 24.1
PSO541G5228 Papaver somniferum HOM05D000007 ORTHO05D000676 4.1e-07 59.7 111 33.3
PSO210G0095 Papaver somniferum HOM05D000007 ORTHO05D000676 5.4e-07 59.3 138 29.7
Atru.chr4.13 Acer truncatum HOM05D000007 ORTHO05D000521 7.1e-07 58.9 207 27.5
Cfa010369 Carpinus fangiana HOM05D000007 ORTHO05D000521 7.1e-07 58.9 127 29.9
Nn1g03289 Nelumbo nucifera HOM05D000007 ORTHO05D000017 7.1e-07 58.9 228 21.5
Ciclev10011634m.g Citrus clementina HOM05D000007 ORTHO05D000521 9.2e-07 58.5 226 29.6
Nitab4.5_0000990g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000039 9.2e-07 58.5 227 24.7
PSO832G2733 Papaver somniferum HOM05D000007 ORTHO05D000676 9.2e-07 58.5 201 25.4
QL02p078646 Quercus lobata HOM05D000007 ORTHO05D000039 9.2e-07 58.5 258 24.8
vmacro04327 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 9.2e-07 58.5 184 25.0
CARHR290540 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.2e-06 58.2 187 27.8
PSO339G5973 Papaver somniferum HOM05D000007 ORTHO05D000676 1.2e-06 58.2 134 28.4
PSO675G6234 Papaver somniferum HOM05D000007 ORTHO05D000676 1.2e-06 58.2 218 26.6
Carub.0003s1002 Capsella rubella HOM05D000171 ORTHO05D000101 1.6e-06 57.8 173 27.7
Haze_11118 Corylus avellana HOM05D003814 ORTHO05D004399 1.6e-06 57.8 175 26.3
PSO566G0158 Papaver somniferum HOM05D000007 ORTHO05D000676 1.6e-06 57.8 123 30.1
PSO017G6321 Papaver somniferum HOM05D000007 ORTHO05D000676 2.1e-06 57.4 123 31.7
PSO063G7627 Papaver somniferum HOM05D004049 ORTHO05D004496 2.1e-06 57.4 108 33.3
Aqoxy5G01432 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.7e-06 57.0 186 28.0
Aqoxy6G01802 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 2.7e-06 57.0 244 23.8
Os12g0128000 Oryza sativa ssp. japonica HOM05D011488 ORTHO05D013340 2.7e-06 57.0 193 25.9
PSO017G6760 Papaver somniferum HOM05D000007 ORTHO05D000676 2.7e-06 57.0 128 27.3
PSO478G4250 Papaver somniferum HOM05D000007 ORTHO05D000676 2.7e-06 57.0 127 29.1
PSO421G0201 Papaver somniferum HOM05D000007 ORTHO05D000676 3.5e-06 56.6 89 33.7
PSO339G4278 Papaver somniferum HOM05D000007 ORTHO05D000676 4.6e-06 56.2 131 30.5
PSO591G0247 Papaver somniferum HOM05D000007 ORTHO05D000676 4.6e-06 56.2 132 31.1
TAR636G1700 Trochodendron aralioides HOM05D003814 ORTHO05D004399 4.6e-06 56.2 162 24.7
CSS0009515 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 6.0e-06 55.8 239 25.5
Haze_03323 Corylus avellana HOM05D000007 ORTHO05D000521 6.0e-06 55.8 127 30.7
PSO339G1000 Papaver somniferum HOM05D004049 ORTHO05D004496 6.0e-06 55.8 163 27.6
PSO407G0052 Papaver somniferum HOM05D000007 ORTHO05D000676 6.0e-06 55.8 135 28.9
QL09p022556 Quercus lobata HOM05D000007 ORTHO05D000039 6.0e-06 55.8 165 28.5
HanXRQChr09g0256141 Helianthus annuus HOM05D000171 ORTHO05D009073 7.8e-06 55.5 207 28.0
PSO017G7194 Papaver somniferum HOM05D000007 ORTHO05D000676 7.8e-06 55.5 133 27.8
PSO384G2612 Papaver somniferum HOM05D000007 ORTHO05D000676 7.8e-06 55.5 119 25.2


User provided reference genes

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