Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G3336 Fragaria x ananassa HOM05D012100 ORTHO05D010550 3.2e-61 238.4 136 100.0
FAN20G0201 Fragaria x ananassa HOM05D012100 ORTHO05D010550 2.4e-56 222.2 136 89.7
FAN15G1158 Fragaria x ananassa HOM05D012100 ORTHO05D010550 6.4e-54 214.2 140 91.4
FvH4_2g24610 Fragaria vesca HOM05D012100 ORTHO05D010550 9.3e-53 210.3 139 91.4
FAN24G2924 Fragaria x ananassa HOM05D012100 ORTHO05D010550 9.3e-53 210.3 139 91.4
RcHm_v2.0_Chr6g0292431 Rosa chinensis HOM05D012100 ORTHO05D010550 3.2e-45 185.3 138 83.3
Prupe.8G251300 Prunus persica HOM05D012100 ORTHO05D010550 7.9e-20 100.9 147 50.3
TAR633G2812 Trochodendron aralioides HOM05D012100 ORTHO05D010550 4.7e-12 75.1 132 46.2
TAR633G2431 Trochodendron aralioides HOM05D012100 ORTHO05D010550 5.1e-11 71.6 133 45.1
Eucgr.K03430 Eucalyptus grandis HOM05D012100 ORTHO05D010550 1.5e-10 70.1 124 41.9
QL12p023816 Quercus lobata HOM05D012100 ORTHO05D010550 4.4e-10 68.6 141 44.0
Hma1.2p1_0209F.1_g089180 Hydrangea macrophylla HOM05D009515 ORTHO05D010550 9.7e-10 67.4 135 45.2
CiPaw.08G100900 Carya illinoinensis HOM05D012100 ORTHO05D010550 1.7e-09 66.6 142 39.4
Sed0008247 Sechium edule HOM05D022235 ORTHO05D010550 1.1e-08 63.9 128 39.1
Sed0000526 Sechium edule HOM05D022235 ORTHO05D010550 1.8e-08 63.2 128 39.8
ClCG09G006580 Citrullus lanatus HOM05D022235 ORTHO05D010550 3.1e-08 62.4 139 40.3
CsaV3_7G028330 Cucumis sativus L. HOM05D022235 ORTHO05D010550 4.1e-08 62.0 123 44.7
Glyma.19G205600 Glycine max HOM05D010368 ORTHO05D012190 4.1e-08 62.0 131 39.7
Potri.014G135560 Populus trichocarpa HOM05D009515 ORTHO05D010550 1.2e-07 60.5 141 42.6
CiPaw.07G098900 Carya illinoinensis HOM05D012100 ORTHO05D010550 2.6e-07 59.3 147 39.5
Duzib138G0019 Durio zibethinus HOM05D009515 ORTHO05D010550 2.6e-07 59.3 145 41.4
Sabra14G0101700 Salix brachista HOM05D009515 ORTHO05D010550 2.6e-07 59.3 138 39.9
MELO3C015888.2 Cucumis melo HOM05D022235 ORTHO05D010550 3.4e-07 58.9 128 46.1
Manes.05G069200 Manihot esculenta HOM05D009515 ORTHO05D010550 4.5e-07 58.5 136 41.9
Manes.01G212700 Manihot esculenta HOM05D009515 ORTHO05D010550 5.9e-07 58.2 133 43.6
Aqoxy5G00640 Aquilegia oxysepala HOM05D036770 ORTHO05D010550 1.7e-06 56.6 142 29.6
Cpa.g.sc9.153 Carica papaya HOM05D009515 ORTHO05D010550 1.7e-06 56.6 135 36.3
TAR365G0883 Trochodendron aralioides HOM05D012100 ORTHO05D010550 3.8e-06 55.5 140 36.4
Cfa006051 Carpinus fangiana HOM05D059206 ORTHO05D010550 5.0e-06 55.1 155 40.6
CSS0013047 Camellia sinensis var. sinensis HOM05D009515 ORTHO05D010550 6.5e-06 54.7 139 42.4
Duzib211G0224 Durio zibethinus HOM05D009515 ORTHO05D010550 6.5e-06 54.7 142 36.6
PGR044G1294 Punica granatum HOM05D057725 ORTHO05D010550 6.5e-06 54.7 133 36.8
PGR088G0005 Punica granatum HOM05D057725 ORTHO05D010550 6.5e-06 54.7 133 36.8
Glyma.03G208400 Glycine max HOM05D010368 ORTHO05D012190 8.5e-06 54.3 138 40.6


User provided reference genes

Program Settings