Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 2.2e-206 722.2 414 100.0
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 2.2e-198 695.7 414 84.5
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 3.8e-198 694.9 414 84.5
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 4.6e-196 688.0 414 83.8
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 3.5e-159 565.5 415 70.1
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 7.2e-157 557.8 414 68.6
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 3.0e-147 525.8 280 87.5
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 5.2e-131 471.9 334 69.2
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 3.2e-128 462.6 334 69.8
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 3.0e-126 456.1 415 57.3
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 3.1e-123 446.0 415 57.8
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 1.5e-122 443.7 420 58.1
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 2.0e-122 443.4 421 56.3
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 2.6e-122 443.0 344 66.0
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 5.8e-122 441.8 386 60.9
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 9.8e-122 441.0 343 63.3
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 4.9e-121 438.7 346 65.3
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 4.9e-121 438.7 360 63.3
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 1.2e-119 434.1 359 62.1
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 2.0e-119 433.3 319 68.7
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 2.0e-119 433.3 312 67.3
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 8.6e-118 427.9 373 60.3
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 1.5e-117 427.2 310 69.0
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 1.6e-116 423.7 413 55.0
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 6.2e-116 421.8 344 62.2
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 6.2e-116 421.8 414 55.6
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 1.4e-115 420.6 348 62.1
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 3.1e-115 419.5 348 62.1
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 1.5e-114 417.2 345 60.9
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 5.8e-114 415.2 333 61.9
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 1.3e-113 414.1 340 60.6
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 2.9e-113 412.9 341 62.2
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 3.7e-113 412.5 414 53.6
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 3.7e-113 412.5 353 60.6
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 8.3e-113 411.4 438 52.3
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 1.1e-112 411.0 375 58.4
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 4.6e-111 405.6 340 59.4
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 6.0e-111 405.2 256 73.8
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 1.0e-110 404.4 338 60.1
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 1.3e-110 404.1 345 61.2
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 3.0e-110 402.9 346 60.1
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 3.9e-110 402.5 346 60.4
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 6.6e-110 401.7 337 60.8
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 6.6e-110 401.7 329 62.0
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 1.1e-109 401.0 317 64.7
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 1.1e-109 401.0 329 62.0
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 2.5e-109 399.8 338 60.4
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 5.6e-109 398.7 345 58.8
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 1.6e-108 397.1 366 56.0
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 8.1e-108 394.8 394 52.8
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 8.1e-108 394.8 341 58.7
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 5.2e-107 392.1 339 59.0
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 1.2e-106 391.0 366 56.0
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 5.8e-106 388.7 340 58.2
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 7.6e-106 388.3 354 58.8
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 1.7e-105 387.1 338 58.9
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 4.1e-104 382.5 335 55.2
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 7.1e-104 381.7 345 55.9
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 7.1e-104 381.7 345 55.9
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 1.2e-103 380.9 297 62.0
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 4.6e-103 379.0 422 48.6
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 4.6e-103 379.0 278 66.2
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 6.0e-103 378.6 333 60.4
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 7.8e-103 378.3 342 54.7
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 3.0e-102 376.3 345 55.1
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 3.0e-102 376.3 352 54.3
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 3.0e-102 376.3 352 54.3
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 3.9e-102 375.9 254 68.9
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 8.6e-102 374.8 317 58.4
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 4.3e-101 372.5 361 54.8
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 7.3e-101 371.7 281 63.0
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 1.6e-100 370.5 357 53.5
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 2.1e-100 370.2 308 57.8
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 2.8e-100 369.8 355 54.1
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 3.1e-99 366.3 314 57.0
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 1.5e-98 364.0 309 59.9
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 6.4e-97 358.6 332 55.7
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 1.9e-93 347.1 362 52.8
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 5.8e-90 335.5 363 48.2
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 1.1e-85 321.2 287 56.8
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 3.3e-85 319.7 251 60.2
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 3.3e-85 319.7 268 57.8
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 5.6e-85 318.9 330 53.3
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 5.8e-82 308.9 400 46.8
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 1.0e-78 298.1 173 80.3
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 1.5e-77 294.3 308 50.3
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 2.5e-77 293.5 254 61.8
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 2.8e-76 290.0 308 50.0
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 4.5e-74 282.7 182 74.7
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 5.8e-74 282.3 207 67.6
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 7.4e-69 265.4 258 52.3
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 1.0e-65 255.0 344 44.8
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 1.7e-65 254.2 336 46.1
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 5.5e-64 249.2 245 56.3
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 1.2e-63 248.1 301 48.2
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 7.4e-61 238.8 309 44.3
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 1.7e-57 227.6 214 55.6
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 3.2e-56 223.4 154 64.9
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 8.8e-54 215.3 333 42.3
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 4.8e-52 209.5 256 43.4
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 3.1e-51 206.8 343 40.2
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 3.4e-50 203.4 114 82.5
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 2.5e-48 197.2 178 56.7
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 4.0e-38 163.3 91 81.3
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 3.3e-37 160.2 120 66.7
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 5.9e-34 149.4 273 38.8
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 7.7e-34 149.1 281 33.8
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 9.4e-32 142.1 88 70.5
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 8.0e-31 139.0 85 74.1
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 2.8e-28 130.6 240 38.8
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 4.1e-27 126.7 134 48.5
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 1.5e-24 118.2 147 47.6
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 1.2e-21 108.6 146 44.5
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 4.4e-21 106.7 85 56.5
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 6.1e-15 86.3 56 69.6
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 1.2e-13 82.0 47 72.3
vmacro02813 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 1.2e-13 82.0 137 41.6


User provided reference genes

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