Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 1.6e-92 342.8 180 100.0
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 8.7e-83 310.5 180 92.2
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 8.7e-83 310.5 180 92.2
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 5.6e-82 307.8 180 91.7
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 8.4e-78 293.9 180 87.2
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 3.0e-75 285.4 179 86.0
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 6.3e-73 277.7 180 81.1
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 8.2e-73 277.3 179 82.7
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 1.1e-72 276.9 180 81.1
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 5.3e-72 274.6 180 80.0
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 2.6e-71 272.3 180 80.0
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 7.6e-71 270.8 180 78.9
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 2.9e-70 268.9 180 78.3
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 3.8e-70 268.5 180 77.8
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 6.5e-70 267.7 180 77.2
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 4.2e-69 265.0 181 77.9
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 7.2e-69 264.2 180 76.7
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 9.3e-69 263.8 180 77.8
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 1.2e-68 263.5 180 78.9
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 2.1e-68 262.7 180 77.8
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 2.7e-68 262.3 180 77.8
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 3.6e-68 261.9 180 76.7
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 3.6e-68 261.9 180 74.4
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 3.6e-68 261.9 181 76.8
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 6.1e-68 261.2 180 78.3
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 6.1e-68 261.2 180 78.9
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 6.1e-68 261.2 180 76.7
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 1.0e-67 260.4 180 78.3
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 1.0e-67 260.4 180 78.9
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 1.0e-67 260.4 180 78.9
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 1.0e-67 260.4 180 75.0
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 1.8e-67 259.6 180 76.1
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 2.3e-67 259.2 181 77.3
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 6.7e-67 257.7 180 76.1
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 8.7e-67 257.3 180 76.7
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 1.1e-66 256.9 180 73.9
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 2.5e-66 255.8 181 76.2
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 3.3e-66 255.4 181 76.8
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 4.3e-66 255.0 179 78.2
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 1.3e-65 253.4 180 73.9
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 1.3e-65 253.4 180 73.3
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 6.3e-65 251.1 181 74.6
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 1.1e-64 250.4 180 75.0
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 1.4e-64 250.0 181 74.6
arahy.Tifrunner.gnm1.ann1.5N1458 Arachis hypogaea HOM05D006253 ORTHO05D007666 2.4e-64 249.2 201 68.2
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 3.1e-64 248.8 181 74.6
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 4.1e-64 248.4 180 77.8
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 4.1e-64 248.4 189 72.5
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 1.5e-63 246.5 181 71.8
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 2.6e-63 245.7 178 71.9
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 4.5e-63 245.0 180 72.8
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 5.9e-63 244.6 180 71.1
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 1.0e-62 243.8 180 71.7
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 1.0e-62 243.8 177 71.8
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 1.0e-62 243.8 180 72.2
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 1.4e-61 240.0 180 70.6
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 1.4e-61 240.0 180 71.1
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 1.9e-61 239.6 180 70.6
arahy.Tifrunner.gnm1.ann1.1E2X9I Arachis hypogaea HOM05D006253 ORTHO05D007666 2.5e-61 239.2 158 78.5
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 3.2e-61 238.8 180 70.0
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 5.5e-61 238.0 181 72.9
Medtr8g099835 Medicago truncatula HOM05D006253 ORTHO05D007666 1.2e-60 236.9 157 80.9
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 2.1e-60 236.1 181 71.8
Carub.0007s0590 Capsella rubella HOM05D006253 ORTHO05D007666 4.6e-60 235.0 181 70.7
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 4.6e-60 235.0 181 71.3
Duzib052G0633 Durio zibethinus HOM05D006253 ORTHO05D007666 7.9e-60 234.2 152 80.9
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 1.0e-59 233.8 181 71.8
CARHR242350 Cardamine hirsuta HOM05D006253 ORTHO05D007666 1.4e-59 233.4 181 70.7
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 1.8e-59 233.0 181 72.4
BcaNung06978 Brassica carinata HOM05D006253 ORTHO05D007666 2.3e-59 232.6 181 71.8
A01p04020 Brassica napus HOM05D006253 ORTHO05D007666 2.3e-59 232.6 181 72.4
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 1.5e-58 229.9 175 70.9
C07p60590 Brassica napus HOM05D006253 ORTHO05D007666 2.0e-58 229.6 181 70.7
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 2.6e-58 229.2 180 68.3
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 3.3e-58 228.8 181 70.7
Psat5g098280 Pisum sativum HOM05D006253 ORTHO05D007666 4.4e-58 228.4 152 79.6
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 4.8e-57 224.9 181 68.5
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 6.3e-57 224.6 182 71.4
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 2.0e-55 219.5 181 68.5
MBI02_g02992_MAGBIO Magnolia biondii HOM05D006253 ORTHO05D007666 2.6e-55 219.2 152 77.6
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 5.9e-55 218.0 152 73.7
HanXRQChr10g0319791 Helianthus annuus HOM05D006253 ORTHO05D007666 1.4e-53 213.4 158 72.2
Solyc01g108260.4 Solanum lycopersicum HOM05D006253 ORTHO05D007666 1.9e-53 213.0 157 72.0
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 7.2e-53 211.1 180 68.3
PSO478G4849 Papaver somniferum HOM05D006253 ORTHO05D007666 9.4e-53 210.7 152 75.7
Sed0021593 Sechium edule HOM05D006253 ORTHO05D007666 3.6e-52 208.8 180 63.9
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 3.0e-51 205.7 158 72.2
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 6.7e-51 204.5 149 72.5
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 1.5e-50 203.4 151 73.5
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 2.0e-50 203.0 173 58.4
DCAR_007862 Daucus carota HOM05D006253 ORTHO05D007666 3.3e-50 202.2 152 71.1
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 2.8e-49 199.1 180 62.8
Mapoly0083s0082 Marchantia polymorpha HOM05D006253 ORTHO05D007666 8.2e-49 197.6 173 60.7
SMO351G0094 Selaginella moellendorffii HOM05D006253 ORTHO05D007666 3.5e-47 192.2 173 59.5
Pp3c22_3990 Physcomitrium patens HOM05D006253 ORTHO05D007666 1.7e-46 189.9 173 56.6
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 2.0e-39 166.4 173 52.0
Phvul.002G266500 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 4.5e-39 165.2 119 72.3
AUR62029937 Chenopodium quinoa HOM05D006253 ORTHO05D007666 1.7e-38 163.3 128 67.2
MD10G1094500 Malus domestica HOM05D006253 ORTHO05D007666 3.8e-38 162.2 96 87.5
AUR62033746 Chenopodium quinoa HOM05D006253 ORTHO05D007666 1.1e-37 160.6 152 59.9
SEGI_00233 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 1.9e-37 159.8 115 70.4
BolC1t00422H Brassica oleracea HOM05D006253 ORTHO05D007666 5.5e-37 158.3 113 77.0
CSS0033941 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 4.7e-36 155.2 147 63.9
Medtr2g105210 Medicago truncatula HOM05D006253 ORTHO05D007666 1.7e-33 146.7 131 63.4
C01p04340 Brassica napus HOM05D006253 ORTHO05D007666 5.9e-31 138.3 107 72.0
Prupe.4G258000 Prunus persica HOM05D006253 ORTHO05D007666 7.7e-31 137.9 107 69.2
Prupe.6G016400 Prunus persica HOM05D006253 ORTHO05D007666 1.3e-30 137.1 130 61.5
vmacro19500 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 2.8e-28 129.4 170 50.0
Cc02_g18770 Coffea canephora HOM05D006253 ORTHO05D007666 2.6e-26 122.9 97 66.0
A03p62890 Brassica napus HOM05D000211 ORTHO05D007666 1.7e-25 120.2 95 70.5
Gorai.005G238200 Gossypium raimondii HOM05D006253 ORTHO05D007666 1.7e-25 120.2 104 63.5
Ah.10g034240 Amaranthus hybridus HOM05D006253 ORTHO05D007666 9.2e-24 114.4 94 64.9
SalBow3G2580 Salvia bowleyana HOM05D006253 ORTHO05D007666 1.2e-23 114.0 128 52.3
vmacro06019 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 1.2e-23 114.0 103 65.0
Cre01.g030950 Chlamydomonas reinhardtii HOM05D006253 ORTHO05D007666 1.6e-23 113.6 173 37.6
MCO10G211 Micromonas commoda HOM05D006253 ORTHO05D007666 2.7e-23 112.8 166 40.4
PRCOL_00001305 Prasinoderma coloniale HOM05D006253 ORTHO05D007666 2.8e-20 102.8 185 37.8
Gohir.D02G210201 Gossypium hirsutum HOM05D006253 ORTHO05D007666 4.0e-19 99.0 104 56.7
ClCG05G009990 Citrullus lanatus HOM05D006253 ORTHO05D007666 5.2e-19 98.6 129 49.6
Sabra09G0078100 Salix brachista HOM05D006253 ORTHO05D007666 6.8e-19 98.2 94 62.8
Hma1.2p1_0804F.1_g221060 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.3e-17 94.0 79 68.4
Hma1.2p1_0674F.1_g201500 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 5.9e-15 85.1 57 78.9
Prupe.2G172700 Prunus persica HOM05D006253 ORTHO05D007666 1.0e-14 84.3 57 78.9
Migut.N01188 Erythranthe guttata HOM05D006253 ORTHO05D007666 2.3e-14 83.2 55 76.4
Prupe.4G259300 Prunus persica HOM05D006253 ORTHO05D007666 3.0e-14 82.8 94 53.2
Oeu025576.2 Olea europaea HOM05D006253 ORTHO05D007666 2.8e-12 76.3 62 67.7
SEGI_00525 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 6.8e-11 71.6 57 61.4
Aqoxy5G01240 Aquilegia oxysepala HOM05D006253 ORTHO05D007666 4.4e-10 68.9 65 56.9
Migut.N01189 Erythranthe guttata HOM05D006253 ORTHO05D007666 3.2e-08 62.8 47 68.1
BolC1t00423H Brassica oleracea HOM05D000123 ORTHO05D009958 7.8e-07 58.2 38 76.3


User provided reference genes

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