Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 4.2e-75 284.6 148 100.0
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 6.1e-74 280.8 148 98.6
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 6.1e-74 280.8 148 98.6
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 1.7e-71 272.7 148 96.6
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.7e-71 272.7 148 96.6
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 1.5e-56 223.0 151 81.5
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 7.0e-38 161.0 174 59.2
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 1.6e-37 159.8 173 59.0
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 1.1e-35 153.7 173 60.7
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 2.1e-34 149.4 122 68.0
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 1.0e-33 147.1 177 55.4
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 7.5e-32 141.0 175 54.9
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 4.9e-31 138.3 166 58.4
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 6.4e-31 137.9 154 57.8
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 8.3e-31 137.5 155 57.4
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 1.6e-29 133.3 118 66.1
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 2.0e-29 132.9 125 64.8
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 2.7e-29 132.5 166 54.8
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 2.7e-29 132.5 149 59.1
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 2.7e-29 132.5 168 53.6
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 6.0e-29 131.3 154 53.9
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 6.0e-29 131.3 177 50.8
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 7.8e-29 131.0 170 52.4
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 1.0e-28 130.6 118 66.1
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 1.0e-28 130.6 154 55.8
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 1.3e-28 130.2 153 55.6
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 1.7e-28 129.8 147 57.1
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 2.3e-28 129.4 155 52.9
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 2.3e-28 129.4 132 59.8
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 3.0e-28 129.0 185 48.6
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 3.0e-28 129.0 164 51.8
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 3.9e-28 128.6 142 58.5
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 3.9e-28 128.6 170 52.9
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 5.0e-28 128.3 159 52.2
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 5.0e-28 128.3 131 59.5
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 6.6e-28 127.9 152 55.9
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 6.6e-28 127.9 129 58.9
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 6.6e-28 127.9 141 53.9
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 6.6e-28 127.9 159 55.3
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 6.6e-28 127.9 142 56.3
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 6.6e-28 127.9 146 54.8
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 8.6e-28 127.5 162 53.1
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 8.6e-28 127.5 162 53.1
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 8.6e-28 127.5 159 54.7
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 8.6e-28 127.5 148 56.8
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.5e-27 126.7 158 55.7
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 1.5e-27 126.7 160 53.8
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 1.9e-27 126.3 156 53.2
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 1.9e-27 126.3 139 59.0
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 2.5e-27 125.9 88 77.3
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 2.5e-27 125.9 113 61.9
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 2.5e-27 125.9 164 51.2
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 3.3e-27 125.6 107 66.4
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 3.3e-27 125.6 146 56.8
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 3.3e-27 125.6 115 65.2
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 5.6e-27 124.8 153 53.6
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 5.6e-27 124.8 113 61.9
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 5.6e-27 124.8 89 74.2
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 9.5e-27 124.0 103 69.9
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 9.5e-27 124.0 86 75.6
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 1.2e-26 123.6 89 73.0
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 1.6e-26 123.2 152 55.3
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 1.6e-26 123.2 89 73.0
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 2.1e-26 122.9 89 75.3
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 2.1e-26 122.9 89 75.3
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 2.1e-26 122.9 122 60.7
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 2.8e-26 122.5 133 57.9
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 2.8e-26 122.5 116 61.2
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 3.6e-26 122.1 86 76.7
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 4.7e-26 121.7 85 76.5
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 4.7e-26 121.7 85 76.5
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 4.7e-26 121.7 107 64.5
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 8.0e-26 120.9 85 77.6
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 1.1e-25 120.6 86 75.6
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 1.1e-25 120.6 132 56.8
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 1.1e-25 120.6 126 58.7
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 2.3e-25 119.4 96 69.8
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 2.3e-25 119.4 86 73.3
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 2.3e-25 119.4 93 73.1
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 3.1e-25 119.0 141 55.3
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 3.1e-25 119.0 86 76.7
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 4.0e-25 118.6 89 73.0
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 6.8e-25 117.9 86 74.4
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 8.9e-25 117.5 133 54.1
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 8.9e-25 117.5 86 72.1
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 1.2e-24 117.1 86 73.3
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 1.5e-24 116.7 114 59.6
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 2.0e-24 116.3 86 70.9
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 2.0e-24 116.3 86 73.3
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 2.6e-24 115.9 178 49.4
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 3.4e-24 115.5 165 50.9
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 4.4e-24 115.2 121 57.9
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 4.4e-24 115.2 86 70.9
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 4.4e-24 115.2 144 51.4
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 4.4e-24 115.2 86 70.9
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 4.4e-24 115.2 144 51.4
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 5.8e-24 114.8 116 59.5
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 1.3e-23 113.6 86 68.6
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 4.9e-23 111.7 155 50.3
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.1e-22 110.5 84 70.2
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.1e-22 110.5 84 70.2
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 2.4e-22 109.4 116 57.8
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 2.4e-22 109.4 117 59.8
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 4.1e-22 108.6 131 55.0
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 2.1e-21 106.3 104 58.7
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 3.5e-21 105.5 104 58.7
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 4.6e-21 105.1 83 66.3
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 4.6e-21 105.1 83 69.9
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 3.9e-20 102.1 95 62.1
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 6.6e-20 101.3 112 53.6
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 2.3e-17 92.8 65 76.9
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 2.9e-15 85.9 118 45.8
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.6e-13 80.1 109 49.5
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.7e-13 79.3 86 55.8
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 4.6e-13 78.6 91 48.4
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 3.9e-12 75.5 93 49.5
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 2.4e-09 66.2 51 68.6


User provided reference genes

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