Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 5.0e-105 384.4 189 100.0
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 2.7e-87 325.5 169 95.3
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 7.0e-75 284.3 138 99.3
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 3.7e-68 261.9 138 89.9
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 1.1e-62 243.8 136 83.1
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 8.9e-62 240.7 142 80.3
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 3.4e-61 238.8 135 83.0
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 4.4e-61 238.4 135 81.5
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 1.3e-60 236.9 141 80.1
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 1.7e-60 236.5 135 81.5
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 2.2e-60 236.1 135 80.7
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 4.9e-60 235.0 144 77.8
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 1.4e-59 233.4 135 77.0
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.9e-59 233.0 135 78.5
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 7.0e-59 231.1 135 78.5
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 1.2e-58 230.3 135 77.0
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 2.1e-58 229.6 135 80.7
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 2.7e-58 229.2 143 74.1
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 3.5e-58 228.8 137 77.4
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 3.5e-58 228.8 135 80.0
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 4.6e-58 228.4 135 78.5
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 6.0e-58 228.0 144 75.7
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 7.8e-58 227.6 139 76.3
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 1.7e-57 226.5 151 72.8
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 1.7e-57 226.5 131 80.9
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 2.3e-57 226.1 136 76.5
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 5.1e-57 224.9 135 75.6
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 5.1e-57 224.9 136 74.3
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 8.6e-57 224.2 137 75.2
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 8.6e-57 224.2 139 74.8
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 8.6e-57 224.2 135 77.0
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 8.6e-57 224.2 135 74.1
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 1.9e-56 223.0 136 77.2
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 1.9e-56 223.0 135 76.3
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 2.5e-56 222.6 135 75.6
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 2.5e-56 222.6 135 75.6
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 2.5e-56 222.6 135 75.6
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 3.3e-56 222.2 144 70.8
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 3.3e-56 222.2 138 78.3
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 3.3e-56 222.2 135 76.3
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 7.3e-56 221.1 139 75.5
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 7.3e-56 221.1 135 74.8
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 7.3e-56 221.1 135 72.6
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 1.6e-55 219.9 141 75.2
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 2.1e-55 219.5 141 69.5
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 2.1e-55 219.5 172 66.9
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 4.7e-55 218.4 135 79.3
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 1.1e-54 217.2 138 75.4
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 1.4e-54 216.9 135 74.8
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 1.4e-54 216.9 135 73.3
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.8e-54 216.5 135 75.6
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 3.1e-54 215.7 135 76.3
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 3.1e-54 215.7 135 75.6
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 3.1e-54 215.7 138 73.9
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 3.1e-54 215.7 138 75.4
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 5.2e-54 214.9 137 76.6
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 6.8e-54 214.5 141 70.2
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 6.8e-54 214.5 135 71.9
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 8.9e-54 214.2 135 73.3
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 8.9e-54 214.2 135 71.1
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 1.2e-53 213.8 136 71.3
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 1.2e-53 213.8 136 71.3
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 1.5e-53 213.4 135 71.9
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 1.5e-53 213.4 138 72.5
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 2.6e-53 212.6 137 73.7
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 2.6e-53 212.6 135 75.6
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 5.8e-53 211.5 141 68.8
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 9.9e-53 210.7 135 76.3
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 2.2e-52 209.5 132 71.2
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 2.2e-52 209.5 138 73.2
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 4.9e-52 208.4 120 81.7
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 1.4e-51 206.8 132 72.7
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.4e-51 206.8 127 75.6
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.4e-51 206.8 127 75.6
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 4.6e-50 201.8 113 80.5
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 1.3e-49 200.3 135 71.1
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 8.6e-49 197.6 133 67.7
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 1.1e-48 197.2 135 67.4
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 1.5e-48 196.8 133 67.7
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 1.5e-48 196.8 133 67.7
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 1.5e-48 196.8 135 69.6
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 3.3e-48 195.7 135 66.7
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 4.3e-48 195.3 133 66.9
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 9.5e-48 194.1 142 66.9
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 1.6e-47 193.4 119 73.9
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 2.8e-47 192.6 135 67.4
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 2.8e-47 192.6 139 63.3
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 3.6e-47 192.2 119 73.9
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 4.7e-47 191.8 133 67.7
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 8.1e-47 191.0 137 65.7
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 8.1e-47 191.0 116 77.6
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 1.4e-46 190.3 137 66.4
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 1.8e-46 189.9 136 66.2
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 1.8e-46 189.9 139 68.3
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 2.4e-46 189.5 136 64.7
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 3.1e-46 189.1 136 66.2
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 3.1e-46 189.1 124 73.4
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 3.1e-46 189.1 124 73.4
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 5.2e-46 188.3 133 66.9
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 8.9e-46 187.6 135 65.9
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 1.2e-45 187.2 136 66.2
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 2.0e-45 186.4 139 63.3
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 3.4e-45 185.7 128 68.8
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 9.9e-45 184.1 136 64.7
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 1.7e-44 183.3 135 63.0
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 2.2e-44 183.0 144 61.1
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 3.8e-44 182.2 188 52.7
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 3.8e-44 182.2 116 70.7
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 8.4e-44 181.0 109 75.2
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 1.6e-42 176.8 185 51.9
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 7.8e-42 174.5 119 70.6
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 3.0e-41 172.6 108 72.2
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.1e-40 170.6 135 60.0
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 3.3e-40 169.1 131 64.9
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 1.7e-36 156.8 111 67.6
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 4.2e-35 152.1 131 51.9
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 4.2e-35 152.1 129 54.3
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 7.1e-35 151.4 124 56.5
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 3.5e-34 149.1 95 75.8
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 1.0e-33 147.5 92 73.9
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 1.0e-33 147.5 116 56.9
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 6.6e-33 144.8 128 51.6
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 2.1e-31 139.8 119 53.8
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 3.6e-31 139.0 82 73.2
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 1.1e-30 137.5 104 59.6
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 4.0e-30 135.6 86 70.9
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 1.2e-26 124.0 84 66.7
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 1.8e-25 120.2 124 45.2
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 7.4e-24 114.8 90 60.0
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 2.8e-15 86.3 87 54.0
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 2.8e-15 86.3 73 57.5
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 1.9e-08 63.5 39 71.8
CsaV3_7G018800 Cucumis sativus L. HOM05D006058 ORTHO05D000001 3.7e-07 59.3 43 58.1
ClCG09G006620 Citrullus lanatus HOM05D032925 ORTHO05D034760 1.8e-06 57.0 109 33.9


User provided reference genes

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